RNA–Protein interactions for RNA: ENST00000635129.1

SMARCA2-234, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-234ENST00000635129 PHF23Q9BUL5 403 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-234ENST00000635129 KNDC1Q76NI1 1749 aa12.95□□□□□ -0.34
SMARCA2-234ENST00000635129 STRCQ7RTU9 1775 aa12.94□□□□□ -0.34
SMARCA2-234ENST00000635129 QRICH2Q9H0J4 1663 aa12.94□□□□□ -0.34
SMARCA2-234ENST00000635129 DDX10Q13206 875 aaKnown RBP12.94□□□□□ -0.34
SMARCA2-234ENST00000635129 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-234ENST00000635129 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-234ENST00000635129 C14orf37Q86TY3 774 aa12.92□□□□□ -0.34
SMARCA2-234ENST00000635129 PROSER2Q86WR7 435 aaPredicted RBP12.92□□□□□ -0.34
SMARCA2-234ENST00000635129 RBM33Q96EV2 1170 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-234ENST00000635129 CDK19Q9BWU1 502 aa12.91□□□□□ -0.34
SMARCA2-234ENST00000635129 CABP2Q9NPB3 220 aa12.91□□□□□ -0.34
SMARCA2-234ENST00000635129 ZNF335Q9H4Z2 1342 aaPredicted RBP12.9□□□□□ -0.34
SMARCA2-234ENST00000635129 NWD1Q149M9 1564 aa12.9□□□□□ -0.34
SMARCA2-234ENST00000635129 CHD2O14647 1828 aaKnown RBP12.9□□□□□ -0.34
SMARCA2-234ENST00000635129 TULP4Q9NRJ4 1543 aa12.9□□□□□ -0.34
SMARCA2-234ENST00000635129 WASLO00401 505 aaPredicted RBP12.9□□□□□ -0.34
SMARCA2-234ENST00000635129 DIEXFQ68CQ4 756 aaKnown RBP12.9□□□□□ -0.34
SMARCA2-234ENST00000635129 NKTRP30414 1462 aaKnown RBP12.9□□□□□ -0.34
SMARCA2-234ENST00000635129 TMC1Q8TDI8 760 aa12.88□□□□□ -0.35
SMARCA2-234ENST00000635129 TMEM94Q12767 1356 aa12.87□□□□□ -0.35
SMARCA2-234ENST00000635129 ATAD2Q6PL18 1390 aa12.87□□□□□ -0.35
SMARCA2-234ENST00000635129 PUS7Q96PZ0 661 aaKnown RBP12.87□□□□□ -0.35
SMARCA2-234ENST00000635129 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.86□□□□□ -0.35
SMARCA2-234ENST00000635129 NUTM2FA1L443 756 aa12.86□□□□□ -0.35
SMARCA2-234ENST00000635129 ADGRL3Q9HAR2 1447 aa12.85□□□□□ -0.35
SMARCA2-234ENST00000635129 NUDT16Q96DE0 195 aaKnown RBP12.84□□□□□ -0.35
SMARCA2-234ENST00000635129 SLC12A5Q9H2X9 1139 aa12.84□□□□□ -0.35
SMARCA2-234ENST00000635129 PANK3Q9H999 370 aa12.84□□□□□ -0.35
SMARCA2-234ENST00000635129 ADGRB2O60241 1585 aa12.84□□□□□ -0.35
SMARCA2-234ENST00000635129 STRCP1A6NGW2 1772 aa12.83□□□□□ -0.36
SMARCA2-234ENST00000635129 C19orf44Q9H6X5 657 aa12.82□□□□□ -0.36
SMARCA2-234ENST00000635129 CABP1Q9NZU7 370 aa12.82□□□□□ -0.36
SMARCA2-234ENST00000635129 PRR36Q9H6K5 1346 aa12.82□□□□□ -0.36
SMARCA2-234ENST00000635129 LRRC7Q96NW7 1537 aa12.82□□□□□ -0.36
SMARCA2-234ENST00000635129 NINLQ9Y2I6 1382 aa12.81□□□□□ -0.36
SMARCA2-234ENST00000635129 NCOA3Q9Y6Q9 1424 aa12.81□□□□□ -0.36
SMARCA2-234ENST00000635129 ATF3P18847 181 aa12.81□□□□□ -0.36
SMARCA2-234ENST00000635129 CCDC61Q9Y6R9 512 aa12.81□□□□□ -0.36
SMARCA2-234ENST00000635129 MSH6P52701 1360 aa12.81□□□□□ -0.36
SMARCA2-234ENST00000635129 PPIP5K1Q6PFW1 1433 aa12.8□□□□□ -0.36
SMARCA2-234ENST00000635129 NALCNQ8IZF0 1738 aa12.8□□□□□ -0.36
SMARCA2-234ENST00000635129 CNGB1Q14028 1251 aaPredicted RBP12.8□□□□□ -0.36
SMARCA2-234ENST00000635129 CDC42BPGQ6DT37 1551 aa12.8□□□□□ -0.36
SMARCA2-234ENST00000635129 ATP7BP35670 1465 aa12.79□□□□□ -0.36
SMARCA2-234ENST00000635129 HDGFL2Q7Z4V5 671 aaPredicted RBP12.79□□□□□ -0.36
SMARCA2-234ENST00000635129 TERF2IPQ9NYB0 399 aa12.79□□□□□ -0.36
SMARCA2-234ENST00000635129 ANKARQ7Z5J8 1434 aa12.79□□□□□ -0.36
SMARCA2-234ENST00000635129 CADPS2Q86UW7 1296 aa12.78□□□□□ -0.36
SMARCA2-234ENST00000635129 KNSTRNQ9Y448 316 aa12.78□□□□□ -0.36
SMARCA2-234ENST00000635129 ANKRD36BQ8N2N9 1353 aa12.78□□□□□ -0.36
SMARCA2-234ENST00000635129 MYOM1P52179 1685 aa12.77□□□□□ -0.36
SMARCA2-234ENST00000635129 ANP32CO43423 234 aa12.77□□□□□ -0.37
SMARCA2-234ENST00000635129 PMFBP1Q8TBY8 1022 aa12.77□□□□□ -0.37
SMARCA2-234ENST00000635129 DCCP43146 1447 aa12.77□□□□□ -0.37
SMARCA2-234ENST00000635129 ESCO1Q5FWF5 840 aa12.76□□□□□ -0.37
SMARCA2-234ENST00000635129 NGDNQ8NEJ9 315 aaKnown RBP12.76□□□□□ -0.37
SMARCA2-234ENST00000635129 CARD14Q9BXL6 1004 aa12.76□□□□□ -0.37
SMARCA2-234ENST00000635129 A0A1W2PP64 1363 aa12.76□□□□□ -0.37
SMARCA2-234ENST00000635129 NSD3Q9BZ95 1437 aa12.76□□□□□ -0.37
SMARCA2-234ENST00000635129 FMN2Q9NZ56 1722 aa12.76□□□□□ -0.37
SMARCA2-234ENST00000635129 PLEKHG3A1L390 1219 aa12.75□□□□□ -0.37
SMARCA2-234ENST00000635129 PER1O15534 1290 aaPredicted RBP12.75□□□□□ -0.37
SMARCA2-234ENST00000635129 PHF8Q9UPP1 1060 aa12.75□□□□□ -0.37
SMARCA2-234ENST00000635129 LTBP4Q8N2S1 1624 aa12.74□□□□□ -0.37
SMARCA2-234ENST00000635129 ACEP12821 1306 aa12.74□□□□□ -0.37
SMARCA2-234ENST00000635129 CC2D1BQ5T0F9 858 aaKnown RBP12.74□□□□□ -0.37
SMARCA2-234ENST00000635129 USP32Q8NFA0 1604 aa12.73□□□□□ -0.37
SMARCA2-234ENST00000635129 C1orf167Q5SNV9 1468 aa12.73□□□□□ -0.37
SMARCA2-234ENST00000635129 CD163L1Q9NR16 1453 aa12.73□□□□□ -0.37
SMARCA2-234ENST00000635129 MST1RQ04912 1400 aa12.73□□□□□ -0.37
SMARCA2-234ENST00000635129 KTN1Q86UP2 1357 aaKnown RBP12.73□□□□□ -0.37
SMARCA2-234ENST00000635129 MIER1Q8N108 512 aa12.73□□□□□ -0.37
SMARCA2-234ENST00000635129 ORAI2Q96SN7 254 aa12.73□□□□□ -0.37
SMARCA2-234ENST00000635129 ZNF692Q9BU19 519 aaPredicted RBP12.73□□□□□ -0.37
SMARCA2-234ENST00000635129 CGNL1Q0VF96 1302 aa12.72□□□□□ -0.37
SMARCA2-234ENST00000635129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMARCA2-234ENST00000635129 CPSF1Q10570 1443 aaKnown RBP12.71□□□□□ -0.37
SMARCA2-234ENST00000635129 TOPAZ1Q8N9V7 1692 aa12.71□□□□□ -0.37
SMARCA2-234ENST00000635129 AMER1Q5JTC6 1135 aaPredicted RBP12.71□□□□□ -0.37
SMARCA2-234ENST00000635129 POLR3AO14802 1390 aaPredicted RBP12.7□□□□□ -0.38
SMARCA2-234ENST00000635129 XIRP1Q702N8 1843 aaKnown RBP12.7□□□□□ -0.38
SMARCA2-234ENST00000635129 SLAIN2Q9P270 581 aa12.7□□□□□ -0.38
SMARCA2-234ENST00000635129 ITSN1Q15811 1721 aa12.7□□□□□ -0.38
SMARCA2-234ENST00000635129 FOXO3O43524 673 aa12.69□□□□□ -0.38
SMARCA2-234ENST00000635129 PSME1Q06323 249 aa12.69□□□□□ -0.38
SMARCA2-234ENST00000635129 PRKRIP1Q9H875 184 aaPredicted RBP12.69□□□□□ -0.38
SMARCA2-234ENST00000635129 USP6P35125 1406 aa12.69□□□□□ -0.38
SMARCA2-234ENST00000635129 EDC4Q6P2E9 1401 aaKnown RBP12.69□□□□□ -0.38
SMARCA2-234ENST00000635129 RALBP1Q15311 655 aa12.68□□□□□ -0.38
SMARCA2-234ENST00000635129 RGPD8O14715 1765 aaPredicted RBP12.68□□□□□ -0.38
SMARCA2-234ENST00000635129 NPC1L1Q9UHC9 1359 aa12.68□□□□□ -0.38
SMARCA2-234ENST00000635129 TTC21BQ7Z4L5 1316 aa12.67□□□□□ -0.38
SMARCA2-234ENST00000635129 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
SMARCA2-234ENST00000635129 XPCQ01831 940 aaPredicted RBP12.67□□□□□ -0.38
SMARCA2-234ENST00000635129 BRINP3Q76B58 766 aa12.67□□□□□ -0.38
SMARCA2-234ENST00000635129 MORC1Q86VD1 984 aa12.67□□□□□ -0.38
SMARCA2-234ENST00000635129 NME9Q86XW9 330 aa12.67□□□□□ -0.38
SMARCA2-234ENST00000635129 GGNBP2Q9H3C7 697 aa12.67□□□□□ -0.38
SMARCA2-234ENST00000635129 NSD2O96028 1365 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 218 ms