RNA–Protein interactions for RNA: ENST00000635058.2

RHOXF1P3-201, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

BASIC

Gene RHOXF1P3, Length 502 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-201ENST00000635058 NPHP3Q7Z494 1330 aa14.69□□□□□ -0.06
RHOXF1P3-201ENST00000635058 LRPPRCP42704 1394 aaKnown RBP14.69□□□□□ -0.06
RHOXF1P3-201ENST00000635058 ABCC11Q96J66 1382 aa14.69□□□□□ -0.06
RHOXF1P3-201ENST00000635058 SIRT1Q96EB6 747 aa14.68□□□□□ -0.06
RHOXF1P3-201ENST00000635058 NUTM2FA1L443 756 aa14.67□□□□□ -0.06
RHOXF1P3-201ENST00000635058 FOXO3O43524 673 aa14.67□□□□□ -0.06
RHOXF1P3-201ENST00000635058 RBM6P78332 1123 aaKnown RBP14.67□□□□□ -0.06
RHOXF1P3-201ENST00000635058 C14orf93Q9H972 538 aaKnown RBP14.67□□□□□ -0.06
RHOXF1P3-201ENST00000635058 DHX57Q6P158 1386 aaKnown RBP14.66□□□□□ -0.06
RHOXF1P3-201ENST00000635058 PPLO60437 1756 aa14.65□□□□□ -0.06
RHOXF1P3-201ENST00000635058 NALCNQ8IZF0 1738 aa14.65□□□□□ -0.06
RHOXF1P3-201ENST00000635058 RAB3GAP2Q9H2M9 1393 aa14.64□□□□□ -0.07
RHOXF1P3-201ENST00000635058 NHSL1Q5SYE7 1610 aa14.64□□□□□ -0.07
RHOXF1P3-201ENST00000635058 CFAP70Q5T0N1 1121 aa14.64□□□□□ -0.07
RHOXF1P3-201ENST00000635058 UPF1Q92900 1129 aaKnown RBP eCLIP14.64□□□□□ -0.07
RHOXF1P3-201ENST00000635058 USP21Q9UK80 565 aa14.64□□□□□ -0.07
RHOXF1P3-201ENST00000635058 TECPR2O15040 1411 aa14.64□□□□□ -0.07
RHOXF1P3-201ENST00000635058 PIK3C2GO75747 1445 aa14.64□□□□□ -0.07
RHOXF1P3-201ENST00000635058 YTHDC2Q9H6S0 1430 aaKnown RBP14.64□□□□□ -0.07
RHOXF1P3-201ENST00000635058 POGKQ9P215 609 aa14.63□□□□□ -0.07
RHOXF1P3-201ENST00000635058 SETD1AO15047 1707 aaKnown RBP14.62□□□□□ -0.07
RHOXF1P3-201ENST00000635058 HRCP23327 699 aa14.62□□□□□ -0.07
RHOXF1P3-201ENST00000635058 XPCQ01831 940 aaPredicted RBP14.62□□□□□ -0.07
RHOXF1P3-201ENST00000635058 STAC3Q96MF2 364 aa14.62□□□□□ -0.07
RHOXF1P3-201ENST00000635058 TRPC5Q9UL62 973 aaPredicted RBP14.62□□□□□ -0.07
RHOXF1P3-201ENST00000635058 PSME1Q06323 249 aa14.61□□□□□ -0.07
RHOXF1P3-201ENST00000635058 FNBP4Q8N3X1 1017 aaPredicted RBP14.61□□□□□ -0.07
RHOXF1P3-201ENST00000635058 CDK12Q9NYV4 1490 aaPredicted RBP14.61□□□□□ -0.07
RHOXF1P3-201ENST00000635058 PLEKHH1Q9ULM0 1364 aa14.6□□□□□ -0.07
RHOXF1P3-201ENST00000635058 SAFB2Q14151 953 aaKnown RBP eCLIP14.6□□□□□ -0.07
RHOXF1P3-201ENST00000635058 KRT28Q7Z3Y7 464 aa14.6□□□□□ -0.07
RHOXF1P3-201ENST00000635058 PRAM1Q96QH2 718 aa14.6□□□□□ -0.07
RHOXF1P3-201ENST00000635058 KDM2AQ9Y2K7 1162 aa14.6□□□□□ -0.07
RHOXF1P3-201ENST00000635058 CDC42BPGQ6DT37 1551 aa14.6□□□□□ -0.07
RHOXF1P3-201ENST00000635058 DCAF11Q8TEB1 546 aa14.59□□□□□ -0.07
RHOXF1P3-201ENST00000635058 PHF8Q9UPP1 1060 aa14.59□□□□□ -0.07
RHOXF1P3-201ENST00000635058 HAP1P54257 671 aaPredicted RBP14.58□□□□□ -0.08
RHOXF1P3-201ENST00000635058 MYOM2P54296 1465 aa14.57□□□□□ -0.08
RHOXF1P3-201ENST00000635058 LAMC1P11047 1609 aa14.56□□□□□ -0.08
RHOXF1P3-201ENST00000635058 LMOD2Q6P5Q4 547 aa14.56□□□□□ -0.08
RHOXF1P3-201ENST00000635058 TRAK1Q9UPV9 953 aa14.56□□□□□ -0.08
RHOXF1P3-201ENST00000635058 SPATA31A3Q5VYP0 1347 aa14.56□□□□□ -0.08
RHOXF1P3-201ENST00000635058 NRXN1Q9ULB1 1477 aa14.55□□□□□ -0.08
RHOXF1P3-201ENST00000635058 PXDNQ92626 1479 aa14.54□□□□□ -0.08
RHOXF1P3-201ENST00000635058 RGS12O14924 1447 aa14.52□□□□□ -0.08
RHOXF1P3-201ENST00000635058 UNC5CLQ8IV45 518 aa14.52□□□□□ -0.09
RHOXF1P3-201ENST00000635058 PMFBP1Q8TBY8 1022 aa14.52□□□□□ -0.09
RHOXF1P3-201ENST00000635058 GJD4Q96KN9 370 aaPredicted RBP14.52□□□□□ -0.09
RHOXF1P3-201ENST00000635058 IFT172Q9UG01 1749 aa14.52□□□□□ -0.09
RHOXF1P3-201ENST00000635058 ATAD2Q6PL18 1390 aa14.51□□□□□ -0.09
RHOXF1P3-201ENST00000635058 PLEKHG5O94827 1062 aa14.51□□□□□ -0.09
RHOXF1P3-201ENST00000635058 HIRIP3Q9BW71 556 aaPredicted RBP14.51□□□□□ -0.09
RHOXF1P3-201ENST00000635058 EIF3AQ14152 1382 aaKnown RBP14.5□□□□□ -0.09
RHOXF1P3-201ENST00000635058 MINK1Q8N4C8 1332 aaPredicted RBP14.5□□□□□ -0.09
RHOXF1P3-201ENST00000635058 ATRNO75882 1429 aa14.49□□□□□ -0.09
RHOXF1P3-201ENST00000635058 KNDC1Q76NI1 1749 aa14.49□□□□□ -0.09
RHOXF1P3-201ENST00000635058 GPRASP1Q5JY77 1395 aa14.49□□□□□ -0.09
RHOXF1P3-201ENST00000635058 WASLO00401 505 aaPredicted RBP14.49□□□□□ -0.09
RHOXF1P3-201ENST00000635058 ANKARQ7Z5J8 1434 aa14.49□□□□□ -0.09
RHOXF1P3-201ENST00000635058 SBNO1A3KN83 1393 aa14.48□□□□□ -0.09
RHOXF1P3-201ENST00000635058 ARHGEF10O15013 1369 aa14.48□□□□□ -0.09
RHOXF1P3-201ENST00000635058 COL22A1Q8NFW1 1626 aaPredicted RBP14.48□□□□□ -0.09
RHOXF1P3-201ENST00000635058 DLC1Q96QB1 1528 aa14.48□□□□□ -0.09
RHOXF1P3-201ENST00000635058 CCDC125Q86Z20 511 aa14.48□□□□□ -0.09
RHOXF1P3-201ENST00000635058 NGDNQ8NEJ9 315 aaKnown RBP14.48□□□□□ -0.09
RHOXF1P3-201ENST00000635058 CABLES1Q8TDN4 633 aa14.48□□□□□ -0.09
RHOXF1P3-201ENST00000635058 BCL9LQ86UU0 1499 aa14.48□□□□□ -0.09
RHOXF1P3-201ENST00000635058 CCDC9Q9Y3X0 531 aaKnown RBP14.47□□□□□ -0.09
RHOXF1P3-201ENST00000635058 TNS3Q68CZ2 1445 aa14.47□□□□□ -0.09
RHOXF1P3-201ENST00000635058 FMN2Q9NZ56 1722 aa14.46□□□□□ -0.09
RHOXF1P3-201ENST00000635058 KIF1AQ12756 1690 aa14.46□□□□□ -0.1
RHOXF1P3-201ENST00000635058 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
RHOXF1P3-201ENST00000635058 VPS72Q15906 364 aa14.44□□□□□ -0.1
RHOXF1P3-201ENST00000635058 ADGRB1O14514 1584 aa14.43□□□□□ -0.1
RHOXF1P3-201ENST00000635058 FAM83GA6ND36 823 aa14.42□□□□□ -0.1
RHOXF1P3-201ENST00000635058 NUDT16Q96DE0 195 aaKnown RBP14.42□□□□□ -0.1
RHOXF1P3-201ENST00000635058 SLIT2O94813 1529 aa14.41□□□□□ -0.1
RHOXF1P3-201ENST00000635058 CDK19Q9BWU1 502 aa14.41□□□□□ -0.1
RHOXF1P3-201ENST00000635058 PRR36Q9H6K5 1346 aa14.41□□□□□ -0.1
RHOXF1P3-201ENST00000635058 A0A0G2JS52 829 aa14.4□□□□□ -0.1
RHOXF1P3-201ENST00000635058 MYT1Q01538 1121 aa14.4□□□□□ -0.1
RHOXF1P3-201ENST00000635058 SF3B2Q13435 895 aaKnown RBP14.4□□□□□ -0.1
RHOXF1P3-201ENST00000635058 SEPT12Q8IYM1 358 aa14.4□□□□□ -0.1
RHOXF1P3-201ENST00000635058 ZRANB1Q9UGI0 708 aa14.4□□□□□ -0.1
RHOXF1P3-201ENST00000635058 RALGAPBQ86X10 1494 aa14.39□□□□□ -0.11
RHOXF1P3-201ENST00000635058 BTG4Q9NY30 223 aa14.39□□□□□ -0.11
RHOXF1P3-201ENST00000635058 CCDC61Q9Y6R9 512 aa14.39□□□□□ -0.11
RHOXF1P3-201ENST00000635058 TULP4Q9NRJ4 1543 aa14.38□□□□□ -0.11
RHOXF1P3-201ENST00000635058 ONECUT3O60422 494 aaPredicted RBP14.38□□□□□ -0.11
RHOXF1P3-201ENST00000635058 ADGRB2O60241 1585 aa14.38□□□□□ -0.11
RHOXF1P3-201ENST00000635058 USP32Q8NFA0 1604 aa14.37□□□□□ -0.11
RHOXF1P3-201ENST00000635058 NBPF1Q3BBV0 1214 aa14.36□□□□□ -0.11
RHOXF1P3-201ENST00000635058 KRT27Q7Z3Y8 459 aa14.36□□□□□ -0.11
RHOXF1P3-201ENST00000635058 PRDM11Q9NQV5 511 aa14.36□□□□□ -0.11
RHOXF1P3-201ENST00000635058 SRPK2P78362 688 aaKnown RBP14.35□□□□□ -0.11
RHOXF1P3-201ENST00000635058 NBPF8Q3BBV2 869 aa14.35□□□□□ -0.11
RHOXF1P3-201ENST00000635058 RGPD8O14715 1765 aaPredicted RBP14.34□□□□□ -0.11
RHOXF1P3-201ENST00000635058 PLEKHG3A1L390 1219 aa14.34□□□□□ -0.11
RHOXF1P3-201ENST00000635058 FAM98CQ17RN3 349 aaKnown RBP14.34□□□□□ -0.11
RHOXF1P3-201ENST00000635058 MARF1Q9Y4F3 1742 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms