RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, human

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF4-208	ENST00000634348	PDILT	Q8N807	584 aa		13.61	□□□□□ -0.23
SRSF4-208	ENST00000634348	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.61	□□□□□ -0.23
SRSF4-208	ENST00000634348	CNKSR2	Q8WXI2	1034 aa		13.61	□□□□□ -0.23
SRSF4-208	ENST00000634348	MTMR7	Q9Y216	660 aa		13.61	□□□□□ -0.23
SRSF4-208	ENST00000634348	FAM161A	Q3B820	660 aa		13.61	□□□□□ -0.23
SRSF4-208	ENST00000634348	CHMP5	Q9NZZ3	219 aa		13.61	□□□□□ -0.23
SRSF4-208	ENST00000634348	ZFYVE27	Q5T4F4	411 aa		13.6	□□□□□ -0.23
SRSF4-208	ENST00000634348	WDR66	Q8TBY9	1149 aa		13.6	□□□□□ -0.23
SRSF4-208	ENST00000634348	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.6	□□□□□ -0.23	2e-6	■■■■□ 23.4
SRSF4-208	ENST00000634348	IBSP	P21815	317 aa	Predicted RBP	13.6	□□□□□ -0.23
SRSF4-208	ENST00000634348	TAX1BP1	Q86VP1	789 aa		13.6	□□□□□ -0.23
SRSF4-208	ENST00000634348	TTLL5	Q6EMB2	1281 aa		13.6	□□□□□ -0.23
SRSF4-208	ENST00000634348	L3MBTL2	Q969R5	705 aa		13.6	□□□□□ -0.23
SRSF4-208	ENST00000634348	ZMYND15	Q9H091	742 aa		13.6	□□□□□ -0.23
SRSF4-208	ENST00000634348	TERF2IP	Q9NYB0	399 aa		13.6	□□□□□ -0.23
SRSF4-208	ENST00000634348	DAAM2	Q86T65	1068 aa		13.6	□□□□□ -0.23
SRSF4-208	ENST00000634348	CEP164	Q9UPV0	1460 aa		13.59	□□□□□ -0.23
SRSF4-208	ENST00000634348	OFD1	O75665	1012 aa		13.59	□□□□□ -0.23
SRSF4-208	ENST00000634348	TDO2	P48775	406 aa		13.58	□□□□□ -0.23
SRSF4-208	ENST00000634348	IL27	Q8NEV9	243 aa		13.58	□□□□□ -0.23
SRSF4-208	ENST00000634348	ZNF428	Q96B54	188 aa		13.58	□□□□□ -0.24
SRSF4-208	ENST00000634348	ANO2	Q9NQ90	1003 aa		13.58	□□□□□ -0.24
SRSF4-208	ENST00000634348	VPS37C	A5D8V6	355 aa	Predicted RBP	13.58	□□□□□ -0.24
SRSF4-208	ENST00000634348	CCDC112	Q8NEF3	446 aa		13.58	□□□□□ -0.24
SRSF4-208	ENST00000634348	PRDM10	Q9NQV6	1147 aa		13.58	□□□□□ -0.24
SRSF4-208	ENST00000634348	MICALCL	Q6ZW33	695 aa		13.58	□□□□□ -0.24
SRSF4-208	ENST00000634348	FAM114A1	Q8IWE2	563 aa		13.58	□□□□□ -0.24
SRSF4-208	ENST00000634348	CPSF2	Q9P2I0	782 aa	Known RBP	13.58	□□□□□ -0.24
SRSF4-208	ENST00000634348	GBP2	P32456	591 aa	Predicted RBP	13.58	□□□□□ -0.24
SRSF4-208	ENST00000634348	CFAP45	Q9UL16	551 aa		13.58	□□□□□ -0.24
SRSF4-208	ENST00000634348	HOMEZ	Q8IX15	550 aa		13.57	□□□□□ -0.24
SRSF4-208	ENST00000634348	SMARCE1	Q969G3	411 aa		13.57	□□□□□ -0.24
SRSF4-208	ENST00000634348	PANK3	Q9H999	370 aa		13.57	□□□□□ -0.24
SRSF4-208	ENST00000634348	EPS15	P42566	896 aa		13.57	□□□□□ -0.24
SRSF4-208	ENST00000634348	MAP2K1	Q02750	393 aa	Predicted RBP	13.57	□□□□□ -0.24
SRSF4-208	ENST00000634348	OLFM4	Q6UX06	510 aa		13.57	□□□□□ -0.24
SRSF4-208	ENST00000634348	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.57	□□□□□ -0.24
SRSF4-208	ENST00000634348	RAB3GAP2	Q9H2M9	1393 aa		13.57	□□□□□ -0.24
SRSF4-208	ENST00000634348	SYNE3	Q6ZMZ3	975 aa		13.57	□□□□□ -0.24
SRSF4-208	ENST00000634348	LETM1	O95202	739 aa	Predicted RBP	13.57	□□□□□ -0.24
SRSF4-208	ENST00000634348	KIAA1328	Q86T90	577 aa		13.57	□□□□□ -0.24
SRSF4-208	ENST00000634348	KLHL34	Q8N239	644 aa		13.56	□□□□□ -0.24
SRSF4-208	ENST00000634348	EVA1C	P58658	441 aa		13.56	□□□□□ -0.24
SRSF4-208	ENST00000634348	TRIM29	Q14134	588 aa		13.56	□□□□□ -0.24
SRSF4-208	ENST00000634348	BRPF3	Q9ULD4	1205 aa		13.56	□□□□□ -0.24
SRSF4-208	ENST00000634348	FYB1	O15117	783 aa		13.56	□□□□□ -0.24
SRSF4-208	ENST00000634348	LMOD3	Q0VAK6	560 aa		13.56	□□□□□ -0.24
SRSF4-208	ENST00000634348	CCDC102A	Q96A19	550 aa		13.56	□□□□□ -0.24
SRSF4-208	ENST00000634348	NUCB2	P80303	420 aa		13.55	□□□□□ -0.24
SRSF4-208	ENST00000634348	DHX8	Q14562	1220 aa	Known RBP	13.55	□□□□□ -0.24
SRSF4-208	ENST00000634348	NLRP13	Q86W25	1043 aa		13.55	□□□□□ -0.24
SRSF4-208	ENST00000634348	MNAT1	P51948	309 aa		13.55	□□□□□ -0.24
SRSF4-208	ENST00000634348	CCDC91	Q7Z6B0	441 aa		13.55	□□□□□ -0.24
SRSF4-208	ENST00000634348	CPLX1	O14810	134 aa		13.55	□□□□□ -0.24
SRSF4-208	ENST00000634348	STAMBP	O95630	424 aa		13.55	□□□□□ -0.24
SRSF4-208	ENST00000634348	ST20-MTHFS	A0A0A6YYL1	179 aa		13.54	□□□□□ -0.24
SRSF4-208	ENST00000634348	TMCO3	Q6UWJ1	677 aa		13.54	□□□□□ -0.24
SRSF4-208	ENST00000634348	TRIM34	Q9BYJ4	488 aa		13.54	□□□□□ -0.24
SRSF4-208	ENST00000634348	TRIM5	Q9C035	493 aa		13.54	□□□□□ -0.24
SRSF4-208	ENST00000634348	SWAP70	Q9UH65	585 aa		13.54	□□□□□ -0.24
SRSF4-208	ENST00000634348	FAM193A	P78312	1265 aa		13.54	□□□□□ -0.24
SRSF4-208	ENST00000634348	PDCL3	Q9H2J4	239 aa		13.54	□□□□□ -0.24
SRSF4-208	ENST00000634348	TIGD1	Q96MW7	591 aa		13.54	□□□□□ -0.24
SRSF4-208	ENST00000634348	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.54	□□□□□ -0.24
SRSF4-208	ENST00000634348	VPS37D	Q86XT2	251 aa		13.54	□□□□□ -0.24
SRSF4-208	ENST00000634348	HDAC5	Q9UQL6	1122 aa		13.54	□□□□□ -0.24
SRSF4-208	ENST00000634348	NFXL1	Q6ZNB6	911 aa		13.53	□□□□□ -0.24
SRSF4-208	ENST00000634348	DNAAF4	Q8WXU2	420 aa		13.53	□□□□□ -0.24
SRSF4-208	ENST00000634348	IQCE	Q6IPM2	695 aa		13.53	□□□□□ -0.24
SRSF4-208	ENST00000634348	C1orf141	Q5JVX7	400 aa		13.53	□□□□□ -0.24
SRSF4-208	ENST00000634348	SARNP	P82979	210 aa	Known RBP	13.53	□□□□□ -0.24
SRSF4-208	ENST00000634348	CBX1	P83916	185 aa		13.53	□□□□□ -0.24
SRSF4-208	ENST00000634348	CPLX2	Q6PUV4	134 aa	Known RBP	13.53	□□□□□ -0.24
SRSF4-208	ENST00000634348	PAF1	Q8N7H5	531 aa		13.53	□□□□□ -0.24
SRSF4-208	ENST00000634348	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.53	□□□□□ -0.24
SRSF4-208	ENST00000634348	TEF	Q10587	303 aa		13.53	□□□□□ -0.24
SRSF4-208	ENST00000634348	NFKBIB	Q15653	356 aa		13.53	□□□□□ -0.24
SRSF4-208	ENST00000634348	CCDC73	Q6ZRK6	1079 aa		13.53	□□□□□ -0.24
SRSF4-208	ENST00000634348	APAF1	O14727	1248 aa		13.53	□□□□□ -0.24
SRSF4-208	ENST00000634348	RNF214	Q8ND24	703 aa		13.53	□□□□□ -0.24
SRSF4-208	ENST00000634348	ARHGAP35	Q9NRY4	1499 aa		13.52	□□□□□ -0.24
SRSF4-208	ENST00000634348	CGNL1	Q0VF96	1302 aa		13.52	□□□□□ -0.24
SRSF4-208	ENST00000634348	SOGA1	O94964	1423 aa		13.52	□□□□□ -0.24
SRSF4-208	ENST00000634348	DDX23	Q9BUQ8	820 aa	Known RBP	13.52	□□□□□ -0.25
SRSF4-208	ENST00000634348	WASHC2C	Q9Y4E1	1318 aa		13.52	□□□□□ -0.25
SRSF4-208	ENST00000634348	CCDC181	Q5TID7	509 aa		13.52	□□□□□ -0.25
SRSF4-208	ENST00000634348	LUZP1	Q86V48	1076 aa		13.52	□□□□□ -0.25
SRSF4-208	ENST00000634348	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.51	□□□□□ -0.25
SRSF4-208	ENST00000634348	LNPK	Q9C0E8	428 aa		13.51	□□□□□ -0.25
SRSF4-208	ENST00000634348	EID1	Q9Y6B2	187 aa		13.51	□□□□□ -0.25
SRSF4-208	ENST00000634348	TRERF1	Q96PN7	1200 aa		13.51	□□□□□ -0.25
SRSF4-208	ENST00000634348	CARMIL1	Q5VZK9	1371 aa		13.51	□□□□□ -0.25
SRSF4-208	ENST00000634348	IFIT2	P09913	472 aa	Known RBP	13.5	□□□□□ -0.25
SRSF4-208	ENST00000634348	ZKSCAN2	Q63HK3	967 aa		13.5	□□□□□ -0.25
SRSF4-208	ENST00000634348	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.5	□□□□□ -0.25
SRSF4-208	ENST00000634348	FHAD1	B1AJZ9	1412 aa		13.5	□□□□□ -0.25
SRSF4-208	ENST00000634348	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.5	□□□□□ -0.25
SRSF4-208	ENST00000634348	VGF	O15240	615 aa	Predicted RBP	13.5	□□□□□ -0.25
SRSF4-208	ENST00000634348	BMS1	Q14692	1282 aa	Known RBP	13.5	□□□□□ -0.25
SRSF4-208	ENST00000634348	MPND	Q8N594	471 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms