RNA–Protein interactions for RNA: ENST00000633534.1

PALM-211, Transcript of paralemmin, humanhuman

TSL 3

Gene PALM, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM-211ENST00000633534 TRAK1Q9UPV9 953 aa28.23■■■□□ 2.11
PALM-211ENST00000633534 CDC42BPGQ6DT37 1551 aa28.22■■■□□ 2.11
PALM-211ENST00000633534 POGKQ9P215 609 aa28.21■■■□□ 2.11
PALM-211ENST00000633534 SAFB2Q14151 953 aaKnown RBP eCLIP28.18■■■□□ 2.1
PALM-211ENST00000633534 NBPF1Q3BBV0 1214 aa28.17■■■□□ 2.1
PALM-211ENST00000633534 C1orf167Q5SNV9 1468 aa28.16■■■□□ 2.1
PALM-211ENST00000633534 BRINP3Q76B58 766 aa28.16■■■□□ 2.1
PALM-211ENST00000633534 CLSPNQ9HAW4 1339 aa28.15■■■□□ 2.1
PALM-211ENST00000633534 TRPM1Q7Z4N2 1603 aa28.12■■■□□ 2.09
PALM-211ENST00000633534 ARHGEF28Q8N1W1 1705 aaKnown RBP28.12■■■□□ 2.09
PALM-211ENST00000633534 PHLPP1O60346 1717 aa28.1■■■□□ 2.09
PALM-211ENST00000633534 AHDC1Q5TGY3 1603 aaPredicted RBP28.1■■■□□ 2.09
PALM-211ENST00000633534 CCER1Q8TC90 406 aaPredicted RBP28.09■■■□□ 2.09
PALM-211ENST00000633534 ROCK2O75116 1388 aaKnown RBP28.09■■■□□ 2.09
PALM-211ENST00000633534 NUTM2FA1L443 756 aa28.08■■■□□ 2.09
PALM-211ENST00000633534 NBPF8Q3BBV2 869 aa28.08■■■□□ 2.09
PALM-211ENST00000633534 ADGRB2O60241 1585 aa28.07■■■□□ 2.08
PALM-211ENST00000633534 FMN2Q9NZ56 1722 aa28.07■■■□□ 2.08
PALM-211ENST00000633534 MINK1Q8N4C8 1332 aaPredicted RBP28.07■■■□□ 2.08
PALM-211ENST00000633534 ORAI2Q96SN7 254 aa28.06■■■□□ 2.08
PALM-211ENST00000633534 COL16A1Q07092 1604 aaPredicted RBP28.05■■■□□ 2.08
PALM-211ENST00000633534 HIRIP3Q9BW71 556 aaPredicted RBP28.05■■■□□ 2.08
PALM-211ENST00000633534 ESCO1Q5FWF5 840 aa28.04■■■□□ 2.08
PALM-211ENST00000633534 NHSL1Q5SYE7 1610 aa28.03■■■□□ 2.08
PALM-211ENST00000633534 RALGAPBQ86X10 1494 aa28.01■■■□□ 2.07
PALM-211ENST00000633534 EIF3AQ14152 1382 aaKnown RBP27.99■■■□□ 2.07
PALM-211ENST00000633534 GPRASP1Q5JY77 1395 aa27.99■■■□□ 2.07
PALM-211ENST00000633534 CENPJQ9HC77 1338 aaPredicted RBP27.99■■■□□ 2.07
PALM-211ENST00000633534 DDX17Q92841 729 aaKnown RBP27.99■■■□□ 2.07
PALM-211ENST00000633534 JCADQ9P266 1359 aa27.99■■■□□ 2.07
PALM-211ENST00000633534 WASLO00401 505 aaPredicted RBP27.98■■■□□ 2.07
PALM-211ENST00000633534 ANKARQ7Z5J8 1434 aa27.98■■■□□ 2.07
PALM-211ENST00000633534 TIMELESSQ9UNS1 1208 aa27.97■■■□□ 2.07
PALM-211ENST00000633534 CARD11Q9BXL7 1154 aa27.95■■■□□ 2.06
PALM-211ENST00000633534 TULP4Q9NRJ4 1543 aa27.95■■■□□ 2.06
PALM-211ENST00000633534 NPHP3Q7Z494 1330 aa27.94■■■□□ 2.06
PALM-211ENST00000633534 MED1Q15648 1581 aaPredicted RBP27.94■■■□□ 2.06
PALM-211ENST00000633534 KIF1AQ12756 1690 aa27.94■■■□□ 2.06
PALM-211ENST00000633534 LRRC59Q96AG4 307 aaKnown RBP27.92■■■□□ 2.06
PALM-211ENST00000633534 USP32Q8NFA0 1604 aa27.92■■■□□ 2.06
PALM-211ENST00000633534 QRICH2Q9H0J4 1663 aa27.91■■■□□ 2.06
PALM-211ENST00000633534 FOXO3O43524 673 aa27.91■■■□□ 2.06
PALM-211ENST00000633534 PHF8Q9UPP1 1060 aa27.91■■■□□ 2.06
PALM-211ENST00000633534 SOS2Q07890 1332 aaPredicted RBP27.91■■■□□ 2.06
PALM-211ENST00000633534 DISP3Q9P2K9 1392 aa27.9■■■□□ 2.06
PALM-211ENST00000633534 PRR36Q9H6K5 1346 aa27.9■■■□□ 2.06
PALM-211ENST00000633534 CDK19Q9BWU1 502 aa27.89■■■□□ 2.06
PALM-211ENST00000633534 SHPRHQ149N8 1683 aa27.88■■■□□ 2.05
PALM-211ENST00000633534 RGPD8O14715 1765 aaPredicted RBP27.87■■■□□ 2.05
PALM-211ENST00000633534 ATP7BP35670 1465 aa27.86■■■□□ 2.05
PALM-211ENST00000633534 PXDNQ92626 1479 aa27.86■■■□□ 2.05
PALM-211ENST00000633534 SPATA31A6Q5VVP1 1343 aa27.86■■■□□ 2.05
PALM-211ENST00000633534 XPCQ01831 940 aaPredicted RBP27.85■■■□□ 2.05
PALM-211ENST00000633534 PMFBP1Q8TBY8 1022 aa27.84■■■□□ 2.05
PALM-211ENST00000633534 NUDT16Q96DE0 195 aaKnown RBP27.84■■■□□ 2.05
PALM-211ENST00000633534 SRPK2P78362 688 aaKnown RBP27.83■■■□□ 2.05
PALM-211ENST00000633534 PNPLA6Q8IY17 1366 aa27.83■■■□□ 2.05
PALM-211ENST00000633534 ITSN1Q15811 1721 aa27.81■■■□□ 2.04
PALM-211ENST00000633534 KRT28Q7Z3Y7 464 aa27.8■■■□□ 2.04
PALM-211ENST00000633534 PHF23Q9BUL5 403 aaPredicted RBP27.8■■■□□ 2.04
PALM-211ENST00000633534 EVC2Q86UK5 1308 aa27.8■■■□□ 2.04
PALM-211ENST00000633534 PSME1Q06323 249 aa27.78■■■□□ 2.04
PALM-211ENST00000633534 CABP2Q9NPB3 220 aa27.78■■■□□ 2.04
PALM-211ENST00000633534 SBNO2Q9Y2G9 1366 aa27.77■■■□□ 2.04
PALM-211ENST00000633534 NGDNQ8NEJ9 315 aaKnown RBP27.77■■■□□ 2.04
PALM-211ENST00000633534 CCDC61Q9Y6R9 512 aa27.77■■■□□ 2.04
PALM-211ENST00000633534 LRP6O75581 1613 aa27.77■■■□□ 2.04
PALM-211ENST00000633534 NUTM2BA6NNL0 878 aaPredicted RBP27.76■■■□□ 2.03
PALM-211ENST00000633534 NUTM2EB1AL46 878 aaPredicted RBP27.76■■■□□ 2.03
PALM-211ENST00000633534 NUTM2AQ8IVF1 878 aaPredicted RBP27.76■■■□□ 2.03
PALM-211ENST00000633534 TOPAZ1Q8N9V7 1692 aa27.75■■■□□ 2.03
PALM-211ENST00000633534 MEX3CQ5U5Q3 659 aaKnown RBP27.74■■■□□ 2.03
PALM-211ENST00000633534 SPATA31A3Q5VYP0 1347 aa27.73■■■□□ 2.03
PALM-211ENST00000633534 TNS3Q68CZ2 1445 aa27.73■■■□□ 2.03
PALM-211ENST00000633534 SBNO1A3KN83 1393 aa27.72■■■□□ 2.03
PALM-211ENST00000633534 PPIP5K1Q6PFW1 1433 aa27.71■■■□□ 2.03
PALM-211ENST00000633534 USP47Q96K76 1375 aa27.71■■■□□ 2.03
PALM-211ENST00000633534 COL22A1Q8NFW1 1626 aaPredicted RBP27.7■■■□□ 2.03
PALM-211ENST00000633534 ST20-MTHFSA0A0A6YYL1 179 aa27.69■■■□□ 2.02
PALM-211ENST00000633534 PLEKHG3A1L390 1219 aa27.69■■■□□ 2.02
PALM-211ENST00000633534 ACEP12821 1306 aa27.68■■■□□ 2.02
PALM-211ENST00000633534 POLR3AO14802 1390 aaPredicted RBP27.68■■■□□ 2.02
PALM-211ENST00000633534 LMOD2Q6P5Q4 547 aa27.67■■■□□ 2.02
PALM-211ENST00000633534 ARHGEF10O15013 1369 aa27.66■■■□□ 2.02
PALM-211ENST00000633534 ATAD2Q6PL18 1390 aa27.66■■■□□ 2.02
PALM-211ENST00000633534 TRPM3Q9HCF6 1732 aaPredicted RBP27.65■■■□□ 2.02
PALM-211ENST00000633534 CABP1Q9NZU7 370 aa27.64■■■□□ 2.02
PALM-211ENST00000633534 PAK3O75914 559 aaPredicted RBP27.63■■■□□ 2.01
PALM-211ENST00000633534 TESK2Q96S53 571 aa27.63■■■□□ 2.01
PALM-211ENST00000633534 SLC24A1O60721 1099 aa27.62■■■□□ 2.01
PALM-211ENST00000633534 ADAMTS2O95450 1211 aa27.62■■■□□ 2.01
PALM-211ENST00000633534 RGS17Q9UGC6 210 aaPredicted RBP27.59■■■□□ 2.01
PALM-211ENST00000633534 PLEKHG5O94827 1062 aa27.58■■■□□ 2.01
PALM-211ENST00000633534 HAP1P54257 671 aaPredicted RBP27.58■■■□□ 2.01
PALM-211ENST00000633534 C8orf37Q96NL8 207 aa27.58■■■□□ 2.01
PALM-211ENST00000633534 ALS2Q96Q42 1657 aa27.58■■■□□ 2.01
PALM-211ENST00000633534 PUS7Q96PZ0 661 aaKnown RBP27.55■■■□□ 2
PALM-211ENST00000633534 BRD4O60885 1362 aaPredicted RBP27.54■■■□□ 2
PALM-211ENST00000633534 USP6P35125 1406 aa27.54■■■□□ 2
PALM-211ENST00000633534 TMF1P82094 1093 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms