RNA–Protein interactions for RNA: ENST00000633295.1

LINC01002-225, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 3

Gene LINC01002, Length 492 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-225ENST00000633295 PRR7Q8TB68 274 aa13.07□□□□□ -0.32
LINC01002-225ENST00000633295 BCL2L12Q9HB09 334 aa13.06□□□□□ -0.32
LINC01002-225ENST00000633295 PCDHGC3Q9UN70 934 aa13.06□□□□□ -0.32
LINC01002-225ENST00000633295 NUDT7P0C024 238 aa13.05□□□□□ -0.32
LINC01002-225ENST00000633295 SEMA3FQ13275 785 aa13.05□□□□□ -0.32
LINC01002-225ENST00000633295 ELOAQ14241 798 aaKnown RBP13.05□□□□□ -0.32
LINC01002-225ENST00000633295 PACS2Q86VP3 889 aa13.05□□□□□ -0.32
LINC01002-225ENST00000633295 TRIM6-TRIM34B2RNG4 842 aa13.04□□□□□ -0.32
LINC01002-225ENST00000633295 C3orf80F5H4A9 247 aa13.04□□□□□ -0.32
LINC01002-225ENST00000633295 EVX2Q03828 476 aa13.04□□□□□ -0.32
LINC01002-225ENST00000633295 PNMA1Q8ND90 353 aa13.04□□□□□ -0.32
LINC01002-225ENST00000633295 LRRN4Q8WUT4 740 aa13.04□□□□□ -0.32
LINC01002-225ENST00000633295 PPP4R3BQ5MIZ7 849 aa13.03□□□□□ -0.32
LINC01002-225ENST00000633295 PSDA5PKW4 1024 aaPredicted RBP13.02□□□□□ -0.33
LINC01002-225ENST00000633295 ATP9BO43861 1147 aa13.02□□□□□ -0.33
LINC01002-225ENST00000633295 DCBLD2Q96PD2 775 aa13.02□□□□□ -0.33
LINC01002-225ENST00000633295 ZSWIM6Q9HCJ5 1215 aa13.02□□□□□ -0.33
LINC01002-225ENST00000633295 MYT1LQ9UL68 1186 aa13.02□□□□□ -0.33
LINC01002-225ENST00000633295 RBM47A0AV96 593 aaKnown RBP13.01□□□□□ -0.33
LINC01002-225ENST00000633295 CCER1Q8TC90 406 aaPredicted RBP13.01□□□□□ -0.33
LINC01002-225ENST00000633295 METRNQ9UJH8 293 aa13.01□□□□□ -0.33
LINC01002-225ENST00000633295 ERCC3P19447 782 aa13□□□□□ -0.33
LINC01002-225ENST00000633295 SLF2Q8IX21 1173 aa13□□□□□ -0.33
LINC01002-225ENST00000633295 CFAP99D6REC4 459 aa12.99□□□□□ -0.33
LINC01002-225ENST00000633295 PTPREP23469 700 aa12.99□□□□□ -0.33
LINC01002-225ENST00000633295 EIF4G2P78344 907 aaKnown RBP eCLIP12.99□□□□□ -0.33
LINC01002-225ENST00000633295 CDCA8Q53HL2 280 aa12.99□□□□□ -0.33
LINC01002-225ENST00000633295 TBC1D9Q6ZT07 1266 aa12.99□□□□□ -0.33
LINC01002-225ENST00000633295 DOK7Q18PE1 504 aa12.98□□□□□ -0.33
LINC01002-225ENST00000633295 TXNDC2Q86VQ3 553 aa12.97□□□□□ -0.33
LINC01002-225ENST00000633295 EPS8L1Q8TE68 723 aa12.97□□□□□ -0.33
LINC01002-225ENST00000633295 TSC1Q92574 1164 aa12.97□□□□□ -0.33
LINC01002-225ENST00000633295 GUCA2AQ02747 115 aa12.96□□□□□ -0.33
LINC01002-225ENST00000633295 ARSIQ5FYB1 569 aa12.96□□□□□ -0.33
LINC01002-225ENST00000633295 KANK4Q5T7N3 995 aaPredicted RBP12.96□□□□□ -0.33
LINC01002-225ENST00000633295 RIMBP2O15034 1052 aa12.95□□□□□ -0.34
LINC01002-225ENST00000633295 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
LINC01002-225ENST00000633295 NFATC2IPQ8NCF5 419 aa12.95□□□□□ -0.34
LINC01002-225ENST00000633295 IGSF5Q9NSI5 407 aa12.94□□□□□ -0.34
LINC01002-225ENST00000633295 UNCXA6NJT0 531 aa12.93□□□□□ -0.34
LINC01002-225ENST00000633295 GABBR2O75899 941 aa12.93□□□□□ -0.34
LINC01002-225ENST00000633295 KHSRPQ92945 711 aaKnown RBP eCLIP12.93□□□□□ -0.34
LINC01002-225ENST00000633295 HLA-CQ95604 372 aa12.93□□□□□ -0.34
LINC01002-225ENST00000633295 C6orf229H3BNL8 230 aa12.92□□□□□ -0.34
LINC01002-225ENST00000633295 SLC10A3P09131 477 aa12.92□□□□□ -0.34
LINC01002-225ENST00000633295 TMEM164Q5U3C3 297 aa12.92□□□□□ -0.34
LINC01002-225ENST00000633295 ZMIZ1Q9ULJ6 1067 aa12.92□□□□□ -0.34
LINC01002-225ENST00000633295 NR6A1Q15406 480 aa12.91□□□□□ -0.34
LINC01002-225ENST00000633295 GPR153Q6NV75 609 aa12.91□□□□□ -0.34
LINC01002-225ENST00000633295 LHX6Q9UPM6 363 aa12.91□□□□□ -0.34
LINC01002-225ENST00000633295 NR1H3Q13133 447 aa12.9□□□□□ -0.34
LINC01002-225ENST00000633295 SMAPO00193 183 aa12.89□□□□□ -0.35
LINC01002-225ENST00000633295 ARID4AP29374 1257 aaPredicted RBP12.88□□□□□ -0.35
LINC01002-225ENST00000633295 PLEKHM2Q8IWE5 1019 aa12.88□□□□□ -0.35
LINC01002-225ENST00000633295 STK32AQ8WU08 396 aa12.88□□□□□ -0.35
LINC01002-225ENST00000633295 NOVA2Q9UNW9 492 aaKnown RBP12.88□□□□□ -0.35
LINC01002-225ENST00000633295 HOXB3P14651 431 aaPredicted RBP12.87□□□□□ -0.35
LINC01002-225ENST00000633295 DNAJC14Q6Y2X3 702 aaPredicted RBP12.87□□□□□ -0.35
LINC01002-225ENST00000633295 FAM196BA6NMK8 535 aa12.86□□□□□ -0.35
LINC01002-225ENST00000633295 DESI1Q6ICB0 168 aa12.86□□□□□ -0.35
LINC01002-225ENST00000633295 PHLDB3Q6NSJ2 640 aa12.86□□□□□ -0.35
LINC01002-225ENST00000633295 SSFA2P28290 1259 aa12.85□□□□□ -0.35
LINC01002-225ENST00000633295 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
LINC01002-225ENST00000633295 SWT1Q5T5J6 900 aaKnown RBP12.85□□□□□ -0.35
LINC01002-225ENST00000633295 USP17L3A6NCW0 530 aa12.84□□□□□ -0.35
LINC01002-225ENST00000633295 USP17L4A6NCW7 530 aa12.84□□□□□ -0.35
LINC01002-225ENST00000633295 USP17L2Q6R6M4 530 aa12.84□□□□□ -0.35
LINC01002-225ENST00000633295 USP17L1Q7RTZ2 530 aa12.84□□□□□ -0.35
LINC01002-225ENST00000633295 USP35Q9P2H5 1018 aa12.84□□□□□ -0.35
LINC01002-225ENST00000633295 FUT2Q10981 343 aa12.83□□□□□ -0.36
LINC01002-225ENST00000633295 PROX2Q3B8N5 592 aa12.82□□□□□ -0.36
LINC01002-225ENST00000633295 RETREG3Q86VR2 466 aa12.82□□□□□ -0.36
LINC01002-225ENST00000633295 ZBBXA8MT70 800 aa12.81□□□□□ -0.36
LINC01002-225ENST00000633295 USP17L5A8MUK1 530 aa12.81□□□□□ -0.36
LINC01002-225ENST00000633295 PER1O15534 1290 aaPredicted RBP12.81□□□□□ -0.36
LINC01002-225ENST00000633295 HMGB1P09429 215 aaKnown RBP12.81□□□□□ -0.36
LINC01002-225ENST00000633295 ATP6V1AP38606 617 aa12.81□□□□□ -0.36
LINC01002-225ENST00000633295 CLP1Q92989 425 aaKnown RBP12.81□□□□□ -0.36
LINC01002-225ENST00000633295 SIRT1Q96EB6 747 aa12.81□□□□□ -0.36
LINC01002-225ENST00000633295 PIK3CDO00329 1044 aa12.8□□□□□ -0.36
LINC01002-225ENST00000633295 FBXO45P0C2W1 286 aa12.8□□□□□ -0.36
LINC01002-225ENST00000633295 SOWAHDA6NJG2 315 aa12.79□□□□□ -0.36
LINC01002-225ENST00000633295 USP17L15C9J2P7 530 aa12.79□□□□□ -0.36
LINC01002-225ENST00000633295 USP17L10C9JJH3 530 aa12.79□□□□□ -0.36
LINC01002-225ENST00000633295 USP17L13C9JLJ4 530 aa12.79□□□□□ -0.36
LINC01002-225ENST00000633295 USP17L12C9JPN9 530 aa12.79□□□□□ -0.36
LINC01002-225ENST00000633295 USP17L11C9JVI0 530 aa12.79□□□□□ -0.36
LINC01002-225ENST00000633295 USP17L21D6R901 530 aa12.79□□□□□ -0.36
LINC01002-225ENST00000633295 USP17L18D6R9N7 530 aa12.79□□□□□ -0.36
LINC01002-225ENST00000633295 USP17L22D6RA61 530 aa12.79□□□□□ -0.36
LINC01002-225ENST00000633295 USP17L17D6RBQ6 530 aa12.79□□□□□ -0.36
LINC01002-225ENST00000633295 USP17L19D6RCP7 530 aa12.79□□□□□ -0.36
LINC01002-225ENST00000633295 USP17L20D6RJB6 530 aa12.79□□□□□ -0.36
LINC01002-225ENST00000633295 USP17L24Q0WX57 530 aa12.79□□□□□ -0.36
LINC01002-225ENST00000633295 MRRFQ96E11 262 aaKnown RBP12.79□□□□□ -0.36
LINC01002-225ENST00000633295 KIAA1522Q9P206 1035 aaPredicted RBP12.79□□□□□ -0.36
LINC01002-225ENST00000633295 KIAA1468Q9P260 1216 aa12.79□□□□□ -0.36
LINC01002-225ENST00000633295 ZC3H4Q9UPT8 1303 aaKnown RBP12.79□□□□□ -0.36
LINC01002-225ENST00000633295 SKIP12755 728 aa12.78□□□□□ -0.36
LINC01002-225ENST00000633295 HDGFP51858 240 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms