RNA–Protein interactions for RNA: ENST00000630712.2

TCF4-272, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-272ENST00000630712 PHOX2BQ99453 314 aa7.74□□□□□ -1.17
TCF4-272ENST00000630712 GMPR2Q9P2T1 348 aaKnown RBP7.74□□□□□ -1.17
TCF4-272ENST00000630712 KDM2AQ9Y2K7 1162 aa7.74□□□□□ -1.17
TCF4-272ENST00000630712 WFS1O76024 890 aa7.73□□□□□ -1.17
TCF4-272ENST00000630712 GCGRP47871 477 aa7.73□□□□□ -1.17
TCF4-272ENST00000630712 CYP4X1Q8N118 509 aa7.73□□□□□ -1.17
TCF4-272ENST00000630712 TOR4AQ9NXH8 423 aa7.73□□□□□ -1.17
TCF4-272ENST00000630712 LMOD2Q6P5Q4 547 aa7.72□□□□□ -1.17
TCF4-272ENST00000630712 RNF19BQ6ZMZ0 732 aa7.72□□□□□ -1.17
TCF4-272ENST00000630712 ZBTB24O43167 697 aaPredicted RBP7.71□□□□□ -1.18
TCF4-272ENST00000630712 BRICD5Q6PL45 260 aa7.71□□□□□ -1.18
TCF4-272ENST00000630712 C11orf95C9JLR9 678 aaPredicted RBP7.7□□□□□ -1.18
TCF4-272ENST00000630712 AXIN1O15169 862 aa7.7□□□□□ -1.18
TCF4-272ENST00000630712 SULF1Q8IWU6 871 aa7.7□□□□□ -1.18
TCF4-272ENST00000630712 TTC24A2A3L6 582 aaPredicted RBP7.69□□□□□ -1.18
TCF4-272ENST00000630712 AVPP01185 164 aa7.69□□□□□ -1.18
TCF4-272ENST00000630712 NFX1Q12986 1120 aaKnown RBP7.69□□□□□ -1.18
TCF4-272ENST00000630712 LCE2CQ5TA81 110 aa7.68□□□□□ -1.18
TCF4-272ENST00000630712 CRIPAKQ8N1N5 446 aa7.68□□□□□ -1.18
TCF4-272ENST00000630712 SALL2Q9Y467 1007 aaPredicted RBP7.68□□□□□ -1.18
TCF4-272ENST00000630712 CCDC180Q9P1Z9 1646 aa7.67□□□□□ -1.18
TCF4-272ENST00000630712 GRIPAP1Q4V328 841 aa7.66□□□□□ -1.18
TCF4-272ENST00000630712 MSS51Q4VC12 460 aa7.66□□□□□ -1.18
TCF4-272ENST00000630712 GPIHBP1Q8IV16 184 aa7.66□□□□□ -1.18
TCF4-272ENST00000630712 STK17AQ9UEE5 414 aa7.65□□□□□ -1.18
TCF4-272ENST00000630712 CTC1Q2NKJ3 1217 aa7.64□□□□□ -1.19
TCF4-272ENST00000630712 HLA-CQ95604 372 aa7.64□□□□□ -1.19
TCF4-272ENST00000630712 J3QL48 77 aa7.63□□□□□ -1.19
TCF4-272ENST00000630712 SMPD1P17405 629 aa7.63□□□□□ -1.19
TCF4-272ENST00000630712 TRIM32Q13049 653 aa7.63□□□□□ -1.19
TCF4-272ENST00000630712 MRGPRX2Q96LB1 330 aa7.63□□□□□ -1.19
TCF4-272ENST00000630712 WNT7AO00755 349 aa7.62□□□□□ -1.19
TCF4-272ENST00000630712 WIPF1O43516 503 aa7.62□□□□□ -1.19
TCF4-272ENST00000630712 SNRPBP14678 240 aaKnown RBP7.62□□□□□ -1.19
TCF4-272ENST00000630712 CD46P15529 392 aa7.62□□□□□ -1.19
TCF4-272ENST00000630712 SMCPP49901 116 aaPredicted RBP7.62□□□□□ -1.19
TCF4-272ENST00000630712 Q3C1V9 767 aa7.62□□□□□ -1.19
TCF4-272ENST00000630712 CCDC24Q8N4L8 307 aa7.62□□□□□ -1.19
TCF4-272ENST00000630712 SNIP1Q8TAD8 396 aaKnown RBP7.62□□□□□ -1.19
TCF4-272ENST00000630712 BCANQ96GW7 911 aa7.62□□□□□ -1.19
TCF4-272ENST00000630712 MMP16P51512 607 aa7.61□□□□□ -1.19
TCF4-272ENST00000630712 KDM4AO75164 1064 aa7.6□□□□□ -1.19
TCF4-272ENST00000630712 NEUROD1Q13562 356 aa7.6□□□□□ -1.19
TCF4-272ENST00000630712 USB1Q9BQ65 265 aaKnown RBP7.6□□□□□ -1.19
TCF4-272ENST00000630712 ATP13A2Q9NQ11 1180 aa7.6□□□□□ -1.19
TCF4-272ENST00000630712 ZEB1P37275 1124 aaPredicted RBP7.59□□□□□ -1.19
TCF4-272ENST00000630712 MDM2Q00987 491 aaPredicted RBP7.59□□□□□ -1.19
TCF4-272ENST00000630712 INSM1Q01101 510 aaPredicted RBP7.59□□□□□ -1.19
TCF4-272ENST00000630712 HPS1Q92902 700 aa7.59□□□□□ -1.19
TCF4-272ENST00000630712 GTF3C3Q9Y5Q9 886 aa7.59□□□□□ -1.19
TCF4-272ENST00000630712 DXOO77932 396 aaKnown RBP7.58□□□□□ -1.2
TCF4-272ENST00000630712 GUCA2AQ02747 115 aa7.58□□□□□ -1.2
TCF4-272ENST00000630712 ARXQ96QS3 562 aa7.58□□□□□ -1.2
TCF4-272ENST00000630712 TERTO14746 1132 aaKnown RBP7.57□□□□□ -1.2
TCF4-272ENST00000630712 SKOR1P84550 965 aa7.57□□□□□ -1.2
TCF4-272ENST00000630712 SYMPKQ92797 1274 aaKnown RBP7.57□□□□□ -1.2
TCF4-272ENST00000630712 IRF6O14896 467 aa7.56□□□□□ -1.2
TCF4-272ENST00000630712 MAP2K5Q13163 448 aa7.56□□□□□ -1.2
TCF4-272ENST00000630712 RC3H1Q5TC82 1133 aaKnown RBP7.56□□□□□ -1.2
TCF4-272ENST00000630712 HOXA2O43364 376 aa7.54□□□□□ -1.2
TCF4-272ENST00000630712 REPIN1Q9BWE0 567 aaKnown RBP7.54□□□□□ -1.2
TCF4-272ENST00000630712 PODXL2Q9NZ53 605 aa7.54□□□□□ -1.2
TCF4-272ENST00000630712 USP46P62068 366 aa7.53□□□□□ -1.2
TCF4-272ENST00000630712 TRIM47Q96LD4 638 aa7.53□□□□□ -1.2
TCF4-272ENST00000630712 SENP2Q9HC62 589 aa7.53□□□□□ -1.2
TCF4-272ENST00000630712 ALDH1A1P00352 501 aa7.52□□□□□ -1.21
TCF4-272ENST00000630712 PTCRAQ6ISU1 281 aaPredicted RBP7.52□□□□□ -1.21
TCF4-272ENST00000630712 JUNDP17535 347 aa7.51□□□□□ -1.21
TCF4-272ENST00000630712 WNT7BP56706 349 aa7.51□□□□□ -1.21
TCF4-272ENST00000630712 CCDC102AQ96A19 550 aa7.51□□□□□ -1.21
TCF4-272ENST00000630712 MINK1Q8N4C8 1332 aaPredicted RBP7.51□□□□□ -1.21
TCF4-272ENST00000630712 PKNOX2Q96KN3 472 aa7.5□□□□□ -1.21
TCF4-272ENST00000630712 RB1CC1Q8TDY2 1594 aa7.5□□□□□ -1.21
TCF4-272ENST00000630712 NUTM1Q86Y26 1132 aa7.49□□□□□ -1.21
TCF4-272ENST00000630712 EHBP1Q8NDI1 1231 aa7.49□□□□□ -1.21
TCF4-272ENST00000630712 NUDT12Q9BQG2 462 aa7.49□□□□□ -1.21
TCF4-272ENST00000630712 FAM217BQ9NTX9 383 aaPredicted RBP7.49□□□□□ -1.21
TCF4-272ENST00000630712 ERICH6BQ5W0A0 696 aa7.48□□□□□ -1.21
TCF4-272ENST00000630712 KIFC2Q96AC6 838 aa7.48□□□□□ -1.21
TCF4-272ENST00000630712 GPCPD1Q9NPB8 672 aa7.48□□□□□ -1.21
TCF4-272ENST00000630712 LOC100996750A0A140TA64 210 aa7.47□□□□□ -1.21
TCF4-272ENST00000630712 BMP1P13497 986 aa7.47□□□□□ -1.21
TCF4-272ENST00000630712 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
TCF4-272ENST00000630712 KRI1Q8N9T8 703 aaKnown RBP7.47□□□□□ -1.21
TCF4-272ENST00000630712 KRTAP4-6Q9BYQ5 205 aa7.47□□□□□ -1.21
TCF4-272ENST00000630712 C6orf229H3BNL8 230 aa7.46□□□□□ -1.22
TCF4-272ENST00000630712 TULP1O00294 542 aaPredicted RBP7.46□□□□□ -1.22
TCF4-272ENST00000630712 SIAH2O43255 324 aa7.46□□□□□ -1.22
TCF4-272ENST00000630712 CLCN1P35523 988 aa7.46□□□□□ -1.22
TCF4-272ENST00000630712 GMPRP36959 345 aa7.46□□□□□ -1.22
TCF4-272ENST00000630712 RETREG3Q86VR2 466 aa7.46□□□□□ -1.22
TCF4-272ENST00000630712 PCDHGC3Q9UN70 934 aa7.46□□□□□ -1.22
TCF4-272ENST00000630712 WASF2Q9Y6W5 498 aa7.46□□□□□ -1.22
TCF4-272ENST00000630712 CAPN5O15484 640 aaPredicted RBP7.45□□□□□ -1.22
TCF4-272ENST00000630712 FDX1P10109 184 aa7.45□□□□□ -1.22
TCF4-272ENST00000630712 VEGFBP49765 207 aa7.45□□□□□ -1.22
TCF4-272ENST00000630712 MYO15BQ96JP2 1530 aa7.44□□□□□ -1.22
TCF4-272ENST00000630712 SH3BP2P78314 561 aa7.44□□□□□ -1.22
TCF4-272ENST00000630712 TRIM46Q7Z4K8 759 aa7.44□□□□□ -1.22
TCF4-272ENST00000630712 PCGF6Q9BYE7 350 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms