RNA–Protein interactions for RNA: ENST00000630499.2

SRRM2-231, Transcript of serine/arginine repetitive matrix 2, human

TSL 1 (best) BASIC

Gene SRRM2, Length 1,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-231	ENST00000630499	PIK3C2G	O75747	1445 aa		33.36	■■■□□ 2.93
SRRM2-231	ENST00000630499	ANKRD30B	Q9BXX2	1392 aa		33.35	■■■□□ 2.93
SRRM2-231	ENST00000630499	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.34	■■■□□ 2.93	1e-15	■■■□□ 17
SRRM2-231	ENST00000630499	LRPPRC	P42704	1394 aa	Known RBP	33.33	■■■□□ 2.93
SRRM2-231	ENST00000630499	PXDN	Q92626	1479 aa		33.31	■■■□□ 2.92
SRRM2-231	ENST00000630499	C8orf37	Q96NL8	207 aa		33.3	■■■□□ 2.92
SRRM2-231	ENST00000630499	ABCC11	Q96J66	1382 aa		33.3	■■■□□ 2.92
SRRM2-231	ENST00000630499	RGL3	Q3MIN7	710 aa		33.29	■■■□□ 2.92
SRRM2-231	ENST00000630499	RGS12	O14924	1447 aa		33.28	■■■□□ 2.92
SRRM2-231	ENST00000630499	NRXN1	Q9ULB1	1477 aa		33.27	■■■□□ 2.92
SRRM2-231	ENST00000630499	MYOM2	P54296	1465 aa		33.26	■■■□□ 2.92
SRRM2-231	ENST00000630499	FMN2	Q9NZ56	1722 aa		33.26	■■■□□ 2.92
SRRM2-231	ENST00000630499	PLEKHH1	Q9ULM0	1364 aa		33.25	■■■□□ 2.91
SRRM2-231	ENST00000630499	WAPL	Q7Z5K2	1190 aa		33.24	■■■□□ 2.91
SRRM2-231	ENST00000630499	QTRT2	Q9H974	415 aa	Known RBP	33.23	■■■□□ 2.91
SRRM2-231	ENST00000630499	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.22	■■■□□ 2.91
SRRM2-231	ENST00000630499	ADAMTS2	O95450	1211 aa		33.22	■■■□□ 2.91
SRRM2-231	ENST00000630499	RBM6	P78332	1123 aa	Known RBP	33.22	■■■□□ 2.91
SRRM2-231	ENST00000630499	TMEM132E	Q6IEE7	984 aa		33.22	■■■□□ 2.91
SRRM2-231	ENST00000630499	MARF1	Q9Y4F3	1742 aa	Known RBP	33.22	■■■□□ 2.91
SRRM2-231	ENST00000630499	NPHP3	Q7Z494	1330 aa		33.21	■■■□□ 2.91
SRRM2-231	ENST00000630499	STK26	Q9P289	416 aa		33.2	■■■□□ 2.91
SRRM2-231	ENST00000630499	ESCO1	Q5FWF5	840 aa		33.19	■■■□□ 2.9
SRRM2-231	ENST00000630499	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.18	■■■□□ 2.9
SRRM2-231	ENST00000630499	NGLY1	Q96IV0	654 aa		33.18	■■■□□ 2.9
SRRM2-231	ENST00000630499	ACIN1	Q9UKV3	1341 aa	Known RBP	33.17	■■■□□ 2.9
SRRM2-231	ENST00000630499	KIF1A	Q12756	1690 aa		33.15	■■■□□ 2.9
SRRM2-231	ENST00000630499	SIRT1	Q96EB6	747 aa		33.15	■■■□□ 2.9
SRRM2-231	ENST00000630499	C14orf93	Q9H972	538 aa	Known RBP	33.15	■■■□□ 2.9
SRRM2-231	ENST00000630499	EP400	Q96L91	3159 aa		33.15	■■■□□ 2.9
SRRM2-231	ENST00000630499	ATRN	O75882	1429 aa		33.13	■■■□□ 2.89
SRRM2-231	ENST00000630499	FOXO3	O43524	673 aa		33.13	■■■□□ 2.89
SRRM2-231	ENST00000630499	RGPD8	O14715	1765 aa	Predicted RBP	33.12	■■■□□ 2.89
SRRM2-231	ENST00000630499	USP21	Q9UK80	565 aa		33.1	■■■□□ 2.89
SRRM2-231	ENST00000630499	BCL9L	Q86UU0	1499 aa		33.1	■■■□□ 2.89
SRRM2-231	ENST00000630499	XPC	Q01831	940 aa	Predicted RBP	33.09	■■■□□ 2.89
SRRM2-231	ENST00000630499	RAB3GAP2	Q9H2M9	1393 aa		33.09	■■■□□ 2.89
SRRM2-231	ENST00000630499	NUTM2F	A1L443	756 aa		33.08	■■■□□ 2.89
SRRM2-231	ENST00000630499	CFAP70	Q5T0N1	1121 aa		33.06	■■■□□ 2.88
SRRM2-231	ENST00000630499	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.05	■■■□□ 2.88
SRRM2-231	ENST00000630499	TRPC5	Q9UL62	973 aa	Predicted RBP	33.05	■■■□□ 2.88
SRRM2-231	ENST00000630499	ADGRB1	O14514	1584 aa		33.04	■■■□□ 2.88
SRRM2-231	ENST00000630499	DLC1	Q96QB1	1528 aa		33.04	■■■□□ 2.88
SRRM2-231	ENST00000630499	SPATA31A3	Q5VYP0	1347 aa		33.02	■■■□□ 2.88
SRRM2-231	ENST00000630499	USP32	Q8NFA0	1604 aa		33.02	■■■□□ 2.88
SRRM2-231	ENST00000630499	DHX57	Q6P158	1386 aa	Known RBP	33.01	■■■□□ 2.88
SRRM2-231	ENST00000630499	ADGRB2	O60241	1585 aa		33	■■■□□ 2.87
SRRM2-231	ENST00000630499	SRCAP	Q6ZRS2	3230 aa		32.98	■■■□□ 2.87
SRRM2-231	ENST00000630499	SLIT2	O94813	1529 aa		32.97	■■■□□ 2.87
SRRM2-231	ENST00000630499	ABCA3	Q99758	1704 aa		32.96	■■■□□ 2.87
SRRM2-231	ENST00000630499	ATAD2	Q6PL18	1390 aa		32.95	■■■□□ 2.86
SRRM2-231	ENST00000630499	PRAM1	Q96QH2	718 aa		32.94	■■■□□ 2.86
SRRM2-231	ENST00000630499	KRT28	Q7Z3Y7	464 aa		32.93	■■■□□ 2.86
SRRM2-231	ENST00000630499	TNS3	Q68CZ2	1445 aa		32.93	■■■□□ 2.86
SRRM2-231	ENST00000630499	GLI3	P10071	1580 aa		32.92	■■■□□ 2.86
SRRM2-231	ENST00000630499	PHF8	Q9UPP1	1060 aa		32.92	■■■□□ 2.86
SRRM2-231	ENST00000630499	ANKAR	Q7Z5J8	1434 aa		32.9	■■■□□ 2.86
SRRM2-231	ENST00000630499	SBNO1	A3KN83	1393 aa		32.88	■■■□□ 2.85
SRRM2-231	ENST00000630499	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.88	■■■□□ 2.85
SRRM2-231	ENST00000630499	GJD4	Q96KN9	370 aa	Predicted RBP	32.87	■■■□□ 2.85
SRRM2-231	ENST00000630499	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.86	■■■□□ 2.85
SRRM2-231	ENST00000630499	RALGAPB	Q86X10	1494 aa		32.86	■■■□□ 2.85
SRRM2-231	ENST00000630499	PLCH1	Q4KWH8	1693 aa		32.85	■■■□□ 2.85
SRRM2-231	ENST00000630499	NWD2	Q9ULI1	1742 aa		32.85	■■■□□ 2.85
SRRM2-231	ENST00000630499	UNC5CL	Q8IV45	518 aa		32.84	■■■□□ 2.85
SRRM2-231	ENST00000630499	HRC	P23327	699 aa		32.82	■■■□□ 2.84
SRRM2-231	ENST00000630499	ALS2	Q96Q42	1657 aa		32.82	■■■□□ 2.84
SRRM2-231	ENST00000630499	PSME1	Q06323	249 aa		32.81	■■■□□ 2.84
SRRM2-231	ENST00000630499	BRWD3	Q6RI45	1802 aa		32.81	■■■□□ 2.84
SRRM2-231	ENST00000630499	POGK	Q9P215	609 aa		32.79	■■■□□ 2.84
SRRM2-231	ENST00000630499	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.79	■■■□□ 2.84
SRRM2-231	ENST00000630499	PRR36	Q9H6K5	1346 aa		32.78	■■■□□ 2.84
SRRM2-231	ENST00000630499	TULP4	Q9NRJ4	1543 aa		32.78	■■■□□ 2.84
SRRM2-231	ENST00000630499	CABLES1	Q8TDN4	633 aa		32.78	■■■□□ 2.84
SRRM2-231	ENST00000630499	ARHGEF10	O15013	1369 aa		32.78	■■■□□ 2.84
SRRM2-231	ENST00000630499	TRAK1	Q9UPV9	953 aa		32.77	■■■□□ 2.84
SRRM2-231	ENST00000630499	DCAF11	Q8TEB1	546 aa		32.76	■■■□□ 2.83
SRRM2-231	ENST00000630499	CRYBG1	Q9Y4K1	1723 aa		32.76	■■■□□ 2.83
SRRM2-231	ENST00000630499	PMFBP1	Q8TBY8	1022 aa		32.75	■■■□□ 2.83
SRRM2-231	ENST00000630499	STAC3	Q96MF2	364 aa		32.75	■■■□□ 2.83
SRRM2-231	ENST00000630499	NRAP	Q86VF7	1730 aa		32.74	■■■□□ 2.83
SRRM2-231	ENST00000630499	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.73	■■■□□ 2.83
SRRM2-231	ENST00000630499	KDM2A	Q9Y2K7	1162 aa		32.72	■■■□□ 2.83
SRRM2-231	ENST00000630499	VPS72	Q15906	364 aa		32.71	■■■□□ 2.83
SRRM2-231	ENST00000630499	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.7	■■■□□ 2.82
SRRM2-231	ENST00000630499	EIF3A	Q14152	1382 aa	Known RBP	32.7	■■■□□ 2.82
SRRM2-231	ENST00000630499	WASL	O00401	505 aa	Predicted RBP	32.69	■■■□□ 2.82
SRRM2-231	ENST00000630499	CCDC125	Q86Z20	511 aa		32.69	■■■□□ 2.82
SRRM2-231	ENST00000630499	ONECUT3	O60422	494 aa	Predicted RBP	32.68	■■■□□ 2.82
SRRM2-231	ENST00000630499	ATP7B	P35670	1465 aa		32.67	■■■□□ 2.82
SRRM2-231	ENST00000630499	ITSN1	Q15811	1721 aa		32.66	■■■□□ 2.82
SRRM2-231	ENST00000630499	FAM83G	A6ND36	823 aa		32.66	■■■□□ 2.82
SRRM2-231	ENST00000630499	KIAA1210	Q9ULL0	1709 aa		32.65	■■■□□ 2.82
SRRM2-231	ENST00000630499	COL14A1	Q05707	1796 aa	Known RBP	32.64	■■■□□ 2.82
SRRM2-231	ENST00000630499	HAP1	P54257	671 aa	Predicted RBP	32.63	■■■□□ 2.81
SRRM2-231	ENST00000630499	LMOD2	Q6P5Q4	547 aa		32.63	■■■□□ 2.81
SRRM2-231	ENST00000630499	BLM	P54132	1417 aa	Predicted RBP	32.61	■■■□□ 2.81
SRRM2-231	ENST00000630499	SEPT12	Q8IYM1	358 aa		32.61	■■■□□ 2.81
SRRM2-231	ENST00000630499	TOPAZ1	Q8N9V7	1692 aa		32.61	■■■□□ 2.81
SRRM2-231	ENST00000630499	GPRASP1	Q5JY77	1395 aa		32.6	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms