RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 NGEFQ8N5V2 710 aa7.43□□□□□ -1.22
NEK3-211ENST00000629912 STK26Q9P289 416 aa7.43□□□□□ -1.22
NEK3-211ENST00000629912 ADAMTS8Q9UP79 889 aa7.43□□□□□ -1.22
NEK3-211ENST00000629912 SETD1AO15047 1707 aaKnown RBP7.43□□□□□ -1.22
NEK3-211ENST00000629912 PRAM1Q96QH2 718 aa7.42□□□□□ -1.22
NEK3-211ENST00000629912 POGKQ9P215 609 aa7.42□□□□□ -1.22
NEK3-211ENST00000629912 CGNL1Q0VF96 1302 aa7.42□□□□□ -1.22
NEK3-211ENST00000629912 POLR3AO14802 1390 aaPredicted RBP7.42□□□□□ -1.22
NEK3-211ENST00000629912 NSD2O96028 1365 aa7.42□□□□□ -1.22
NEK3-211ENST00000629912 ATAD2Q6PL18 1390 aa7.42□□□□□ -1.22
NEK3-211ENST00000629912 ANKRD36BQ8N2N9 1353 aa7.42□□□□□ -1.22
NEK3-211ENST00000629912 WDR43Q15061 677 aaKnown RBP eCLIP7.41□□□□□ -1.22
NEK3-211ENST00000629912 MORC1Q86VD1 984 aa7.41□□□□□ -1.22
NEK3-211ENST00000629912 CABP2Q9NPB3 220 aa7.41□□□□□ -1.22
NEK3-211ENST00000629912 PPP4R2Q9NY27 417 aa7.41□□□□□ -1.22
NEK3-211ENST00000629912 NSD3Q9BZ95 1437 aa7.41□□□□□ -1.22
NEK3-211ENST00000629912 NLRP1Q9C000 1473 aa7.41□□□□□ -1.22
NEK3-211ENST00000629912 UBR1Q8IWV7 1749 aa7.41□□□□□ -1.22
NEK3-211ENST00000629912 NCBP3Q53F19 620 aaKnown RBP7.4□□□□□ -1.22
NEK3-211ENST00000629912 CDK19Q9BWU1 502 aa7.4□□□□□ -1.22
NEK3-211ENST00000629912 TERF2IPQ9NYB0 399 aa7.4□□□□□ -1.22
NEK3-211ENST00000629912 TMEM2Q9UHN6 1383 aa7.4□□□□□ -1.22
NEK3-211ENST00000629912 NRXN3Q9Y4C0 1643 aa7.4□□□□□ -1.22
NEK3-211ENST00000629912 FAM135BQ49AJ0 1406 aa7.39□□□□□ -1.23
NEK3-211ENST00000629912 MINK1Q8N4C8 1332 aaPredicted RBP7.39□□□□□ -1.23
NEK3-211ENST00000629912 SRPK2P78362 688 aaKnown RBP7.39□□□□□ -1.23
NEK3-211ENST00000629912 KNDC1Q76NI1 1749 aa7.38□□□□□ -1.23
NEK3-211ENST00000629912 MED14O60244 1454 aa7.38□□□□□ -1.23
NEK3-211ENST00000629912 TECPR2O15040 1411 aa7.38□□□□□ -1.23
NEK3-211ENST00000629912 ZNF521Q96K83 1311 aa7.38□□□□□ -1.23
NEK3-211ENST00000629912 TRHP20396 242 aaPredicted RBP7.38□□□□□ -1.23
NEK3-211ENST00000629912 SAFB2Q14151 953 aaKnown RBP eCLIP7.38□□□□□ -1.23
NEK3-211ENST00000629912 C3P01024 1663 aa7.38□□□□□ -1.23
NEK3-211ENST00000629912 METP08581 1390 aa7.37□□□□□ -1.23
NEK3-211ENST00000629912 PLEKHG1Q9ULL1 1385 aa7.37□□□□□ -1.23
NEK3-211ENST00000629912 WASLO00401 505 aaPredicted RBP7.37□□□□□ -1.23
NEK3-211ENST00000629912 HDGFL2Q7Z4V5 671 aaPredicted RBP7.37□□□□□ -1.23
NEK3-211ENST00000629912 WAPLQ7Z5K2 1190 aa7.37□□□□□ -1.23
NEK3-211ENST00000629912 TRMT2AQ8IZ69 625 aaKnown RBP7.37□□□□□ -1.23
NEK3-211ENST00000629912 BCANQ96GW7 911 aa7.37□□□□□ -1.23
NEK3-211ENST00000629912 CD163L1Q9NR16 1453 aa7.36□□□□□ -1.23
NEK3-211ENST00000629912 ARHGAP23Q9P227 1491 aa7.36□□□□□ -1.23
NEK3-211ENST00000629912 A0A1W2PP64 1363 aa7.36□□□□□ -1.23
NEK3-211ENST00000629912 FYB1O15117 783 aa7.36□□□□□ -1.23
NEK3-211ENST00000629912 LTKP29376 864 aa7.36□□□□□ -1.23
NEK3-211ENST00000629912 CEBPAP49715 358 aaPredicted RBP7.36□□□□□ -1.23
NEK3-211ENST00000629912 MTHFSP49914 203 aa7.36□□□□□ -1.23
NEK3-211ENST00000629912 TXNDC2Q86VQ3 553 aa7.36□□□□□ -1.23
NEK3-211ENST00000629912 THEMISQ8N1K5 641 aaPredicted RBP7.36□□□□□ -1.23
NEK3-211ENST00000629912 CDCA7LQ96GN5 454 aa7.36□□□□□ -1.23
NEK3-211ENST00000629912 CFAP53Q96M91 514 aa7.36□□□□□ -1.23
NEK3-211ENST00000629912 CABP1Q9NZU7 370 aa7.36□□□□□ -1.23
NEK3-211ENST00000629912 RCAN3Q9UKA8 241 aa7.36□□□□□ -1.23
NEK3-211ENST00000629912 TBX22Q9Y458 520 aa7.36□□□□□ -1.23
NEK3-211ENST00000629912 EID1Q9Y6B2 187 aa7.36□□□□□ -1.23
NEK3-211ENST00000629912 SLIT1O75093 1534 aa7.36□□□□□ -1.23
NEK3-211ENST00000629912 FER1L4A9Z1Z3 1794 aa7.36□□□□□ -1.23
NEK3-211ENST00000629912 ADAMTS13Q76LX8 1427 aa7.35□□□□□ -1.23
NEK3-211ENST00000629912 ANKRD26Q9UPS8 1709 aa7.35□□□□□ -1.23
NEK3-211ENST00000629912 PLEKHH1Q9ULM0 1364 aa7.35□□□□□ -1.23
NEK3-211ENST00000629912 IRX6P78412 446 aaPredicted RBP7.35□□□□□ -1.23
NEK3-211ENST00000629912 GOLGA2Q08379 1002 aa7.35□□□□□ -1.23
NEK3-211ENST00000629912 SLFN5Q08AF3 891 aa7.35□□□□□ -1.23
NEK3-211ENST00000629912 SALL2Q9Y467 1007 aaPredicted RBP7.35□□□□□ -1.23
NEK3-211ENST00000629912 CPS1P31327 1500 aa7.35□□□□□ -1.23
NEK3-211ENST00000629912 ATP7BP35670 1465 aa7.35□□□□□ -1.23
NEK3-211ENST00000629912 CPSF1Q10570 1443 aaKnown RBP7.35□□□□□ -1.23
NEK3-211ENST00000629912 SETD1BQ9UPS6 1966 aaKnown RBP7.34□□□□□ -1.23
NEK3-211ENST00000629912 APAF1O14727 1248 aa7.34□□□□□ -1.23
NEK3-211ENST00000629912 RRP1P56182 461 aaKnown RBP7.34□□□□□ -1.23
NEK3-211ENST00000629912 DUSP27Q5VZP5 1158 aa7.34□□□□□ -1.23
NEK3-211ENST00000629912 RUNDC1Q96C34 613 aa7.34□□□□□ -1.23
NEK3-211ENST00000629912 ZNF692Q9BU19 519 aaPredicted RBP7.34□□□□□ -1.23
NEK3-211ENST00000629912 CCDC61Q9Y6R9 512 aa7.34□□□□□ -1.23
NEK3-211ENST00000629912 SHPRHQ149N8 1683 aa7.34□□□□□ -1.23
NEK3-211ENST00000629912 SENP3-EIF4A1A0A087X0R7 540 aa7.33□□□□□ -1.24
NEK3-211ENST00000629912 CCDC27Q2M243 656 aa7.33□□□□□ -1.24
NEK3-211ENST00000629912 NUDT16Q96DE0 195 aaKnown RBP7.33□□□□□ -1.24
NEK3-211ENST00000629912 DNAJC5Q9H3Z4 198 aa7.33□□□□□ -1.24
NEK3-211ENST00000629912 PNPLA6Q8IY17 1366 aa7.33□□□□□ -1.24
NEK3-211ENST00000629912 KIF20BQ96Q89 1820 aa7.32□□□□□ -1.24
NEK3-211ENST00000629912 PLEKHG3A1L390 1219 aa7.32□□□□□ -1.24
NEK3-211ENST00000629912 E9PSI1 815 aa7.32□□□□□ -1.24
NEK3-211ENST00000629912 TNNT2P45379 298 aaPredicted RBP7.32□□□□□ -1.24
NEK3-211ENST00000629912 WDR63Q8IWG1 891 aa7.32□□□□□ -1.24
NEK3-211ENST00000629912 CCDC146Q8IYE0 955 aa7.32□□□□□ -1.24
NEK3-211ENST00000629912 GGNBP2Q9H3C7 697 aa7.32□□□□□ -1.24
NEK3-211ENST00000629912 TSHZ2Q9NRE2 1034 aa7.32□□□□□ -1.24
NEK3-211ENST00000629912 ROBO2Q9HCK4 1378 aa7.32□□□□□ -1.24
NEK3-211ENST00000629912 ADGRB2O60241 1585 aa7.31□□□□□ -1.24
NEK3-211ENST00000629912 DIP2AQ14689 1571 aa7.31□□□□□ -1.24
NEK3-211ENST00000629912 CDC42BPGQ6DT37 1551 aa7.31□□□□□ -1.24
NEK3-211ENST00000629912 EDC4Q6P2E9 1401 aaKnown RBP7.31□□□□□ -1.24
NEK3-211ENST00000629912 PPIP5K1Q6PFW1 1433 aa7.31□□□□□ -1.24
NEK3-211ENST00000629912 WWC1Q8IX03 1113 aa7.31□□□□□ -1.24
NEK3-211ENST00000629912 PIAS4Q8N2W9 510 aaPredicted RBP7.31□□□□□ -1.24
NEK3-211ENST00000629912 PNNQ9H307 717 aaKnown RBP7.31□□□□□ -1.24
NEK3-211ENST00000629912 PIK3R4Q99570 1358 aa7.31□□□□□ -1.24
NEK3-211ENST00000629912 AKAP12Q02952 1782 aa7.31□□□□□ -1.24
NEK3-211ENST00000629912 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms