RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 UNC5CLQ8IV45 518 aa18.48■□□□□ 0.55
CHD2-218ENST00000629346 HRCP23327 699 aa18.47■□□□□ 0.55
CHD2-218ENST00000629346 ESCO1Q5FWF5 840 aa18.47■□□□□ 0.55
CHD2-218ENST00000629346 NUP155O75694 1391 aa18.46■□□□□ 0.55
CHD2-218ENST00000629346 SEPT12Q8IYM1 358 aa18.46■□□□□ 0.55
CHD2-218ENST00000629346 GLI3P10071 1580 aa18.46■□□□□ 0.55
CHD2-218ENST00000629346 NPHP3Q7Z494 1330 aa18.46■□□□□ 0.55
CHD2-218ENST00000629346 ROBO2Q9HCK4 1378 aa18.45■□□□□ 0.54
CHD2-218ENST00000629346 FOXO3O43524 673 aa18.45■□□□□ 0.54
CHD2-218ENST00000629346 MARF1Q9Y4F3 1742 aaKnown RBP18.44■□□□□ 0.54
CHD2-218ENST00000629346 IQGAP3Q86VI3 1631 aa18.44■□□□□ 0.54
CHD2-218ENST00000629346 BRWD3Q6RI45 1802 aa18.44■□□□□ 0.54
CHD2-218ENST00000629346 BAG6P46379 1132 aa18.41■□□□□ 0.54
CHD2-218ENST00000629346 CCDC9Q9Y3X0 531 aaKnown RBP18.41■□□□□ 0.54
CHD2-218ENST00000629346 PXDNQ92626 1479 aa18.4■□□□□ 0.54
CHD2-218ENST00000629346 KRT27Q7Z3Y8 459 aa18.4■□□□□ 0.54
CHD2-218ENST00000629346 SLIT2O94813 1529 aa18.39■□□□□ 0.54
CHD2-218ENST00000629346 NUTM2FA1L443 756 aa18.39■□□□□ 0.53
CHD2-218ENST00000629346 PLEKHG5O94827 1062 aa18.39■□□□□ 0.53
CHD2-218ENST00000629346 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.39■□□□□ 0.53
CHD2-218ENST00000629346 A0A0G2JS52 829 aa18.38■□□□□ 0.53
CHD2-218ENST00000629346 MYT1Q01538 1121 aa18.38■□□□□ 0.53
CHD2-218ENST00000629346 NEXMIFQ5QGS0 1516 aa18.38■□□□□ 0.53
CHD2-218ENST00000629346 YY1P25490 414 aa18.37■□□□□ 0.53
CHD2-218ENST00000629346 R3HDM1Q15032 1099 aaKnown RBP18.37■□□□□ 0.53
CHD2-218ENST00000629346 SPHKAPQ2M3C7 1700 aa18.37■□□□□ 0.53
CHD2-218ENST00000629346 HAP1P54257 671 aaPredicted RBP18.36■□□□□ 0.53
CHD2-218ENST00000629346 EN1Q05925 392 aaPredicted RBP18.35■□□□□ 0.53
CHD2-218ENST00000629346 VPS72Q15906 364 aa18.35■□□□□ 0.53
CHD2-218ENST00000629346 LRPPRCP42704 1394 aaKnown RBP18.34■□□□□ 0.53
CHD2-218ENST00000629346 HFM1A2PYH4 1435 aa18.33■□□□□ 0.53
CHD2-218ENST00000629346 ONECUT3O60422 494 aaPredicted RBP18.33■□□□□ 0.52
CHD2-218ENST00000629346 SPATA31A3Q5VYP0 1347 aa18.32■□□□□ 0.52
CHD2-218ENST00000629346 VGFO15240 615 aaPredicted RBP18.32■□□□□ 0.52
CHD2-218ENST00000629346 ITGAEP38570 1179 aa18.32■□□□□ 0.52
CHD2-218ENST00000629346 CABLES1Q8TDN4 633 aa18.32■□□□□ 0.52
CHD2-218ENST00000629346 CLTCL1P53675 1640 aa18.31■□□□□ 0.52
CHD2-218ENST00000629346 ROCK1Q13464 1354 aa18.3■□□□□ 0.52
CHD2-218ENST00000629346 FAM182BQ5T319 152 aa18.3■□□□□ 0.52
CHD2-218ENST00000629346 USP32Q8NFA0 1604 aa18.3■□□□□ 0.52
CHD2-218ENST00000629346 KRT28Q7Z3Y7 464 aa18.29■□□□□ 0.52
CHD2-218ENST00000629346 FAM98CQ17RN3 349 aaKnown RBP18.28■□□□□ 0.52
CHD2-218ENST00000629346 NAIPQ13075 1403 aa18.28■□□□□ 0.52
CHD2-218ENST00000629346 CDC42BPGQ6DT37 1551 aa18.28■□□□□ 0.52
CHD2-218ENST00000629346 STK26Q9P289 416 aa18.27■□□□□ 0.52
CHD2-218ENST00000629346 LMOD2Q6P5Q4 547 aa18.26■□□□□ 0.51
CHD2-218ENST00000629346 WAPLQ7Z5K2 1190 aa18.26■□□□□ 0.51
CHD2-218ENST00000629346 PRAG1Q86YV5 1406 aa18.25■□□□□ 0.51
CHD2-218ENST00000629346 EZH2Q15910 746 aaKnown RBP18.25■□□□□ 0.51
CHD2-218ENST00000629346 KIF1BO60333 1816 aa18.24■□□□□ 0.51
CHD2-218ENST00000629346 PLCH1Q4KWH8 1693 aa18.23■□□□□ 0.51
CHD2-218ENST00000629346 FAM83GA6ND36 823 aa18.23■□□□□ 0.51
CHD2-218ENST00000629346 CCDC144AA2RUR9 1427 aa18.23■□□□□ 0.51
CHD2-218ENST00000629346 PSME1Q06323 249 aa18.2■□□□□ 0.5
CHD2-218ENST00000629346 RGPD1P0DJD0 1748 aa18.2■□□□□ 0.5
CHD2-218ENST00000629346 NWD2Q9ULI1 1742 aa18.2■□□□□ 0.5
CHD2-218ENST00000629346 TNS3Q68CZ2 1445 aa18.19■□□□□ 0.5
CHD2-218ENST00000629346 BTG4Q9NY30 223 aa18.19■□□□□ 0.5
CHD2-218ENST00000629346 RPGRIP1LQ68CZ1 1315 aa18.19■□□□□ 0.5
CHD2-218ENST00000629346 PLEKHH1Q9ULM0 1364 aa18.18■□□□□ 0.5
CHD2-218ENST00000629346 CAMKK2Q96RR4 588 aa18.17■□□□□ 0.5
CHD2-218ENST00000629346 PHF8Q9UPP1 1060 aa18.17■□□□□ 0.5
CHD2-218ENST00000629346 DCAF8L1A6NGE4 600 aa18.16■□□□□ 0.5
CHD2-218ENST00000629346 TRIM37O94972 964 aa18.16■□□□□ 0.5
CHD2-218ENST00000629346 KIF1AQ12756 1690 aa18.15■□□□□ 0.5
CHD2-218ENST00000629346 TMEM132EQ6IEE7 984 aa18.15■□□□□ 0.5
CHD2-218ENST00000629346 PPP1R1BQ9UD71 204 aaPredicted RBP18.15■□□□□ 0.5
CHD2-218ENST00000629346 DISP2A7MBM2 1401 aa18.15■□□□□ 0.5
CHD2-218ENST00000629346 APBA3O96018 575 aa18.14■□□□□ 0.49
CHD2-218ENST00000629346 FMN2Q9NZ56 1722 aa18.14■□□□□ 0.49
CHD2-218ENST00000629346 TNS1Q9HBL0 1735 aaKnown RBP18.12■□□□□ 0.49
CHD2-218ENST00000629346 ADGRF5Q8IZF2 1346 aa18.12■□□□□ 0.49
CHD2-218ENST00000629346 ARHGEF10O15013 1369 aa18.12■□□□□ 0.49
CHD2-218ENST00000629346 ABCA3Q99758 1704 aa18.12■□□□□ 0.49
CHD2-218ENST00000629346 PPLO60437 1756 aa18.12■□□□□ 0.49
CHD2-218ENST00000629346 SPATA31A5Q5VU36 1347 aa18.11■□□□□ 0.49
CHD2-218ENST00000629346 SPATA31A7Q8IWB4 1347 aa18.11■□□□□ 0.49
CHD2-218ENST00000629346 SBNO1A3KN83 1393 aa18.11■□□□□ 0.49
CHD2-218ENST00000629346 NRAPQ86VF7 1730 aa18.11■□□□□ 0.49
CHD2-218ENST00000629346 TECPR2O15040 1411 aa18.1■□□□□ 0.49
CHD2-218ENST00000629346 RGPD8O14715 1765 aaPredicted RBP18.09■□□□□ 0.49
CHD2-218ENST00000629346 FAM196AQ6ZSG2 479 aa18.09■□□□□ 0.49
CHD2-218ENST00000629346 PMFBP1Q8TBY8 1022 aa18.09■□□□□ 0.49
CHD2-218ENST00000629346 SPON1Q9HCB6 807 aa18.09■□□□□ 0.49
CHD2-218ENST00000629346 ABCC11Q96J66 1382 aa18.08■□□□□ 0.49
CHD2-218ENST00000629346 NBPF8Q3BBV2 869 aa18.08■□□□□ 0.48
CHD2-218ENST00000629346 NBPF14Q5TI25 921 aa18.08■□□□□ 0.48
CHD2-218ENST00000629346 RGL3Q3MIN7 710 aa18.07■□□□□ 0.48
CHD2-218ENST00000629346 ADGRB2O60241 1585 aa18.07■□□□□ 0.48
CHD2-218ENST00000629346 NRXN1Q9ULB1 1477 aa18.06■□□□□ 0.48
CHD2-218ENST00000629346 SENP3-EIF4A1A0A087X0R7 540 aa18.05■□□□□ 0.48
CHD2-218ENST00000629346 KCNQ2O43526 872 aa18.05■□□□□ 0.48
CHD2-218ENST00000629346 SAFB2Q14151 953 aaKnown RBP eCLIP18.05■□□□□ 0.48
CHD2-218ENST00000629346 PARD3Q8TEW0 1356 aa18.04■□□□□ 0.48
CHD2-218ENST00000629346 COL14A1Q05707 1796 aaKnown RBP18.04■□□□□ 0.48
CHD2-218ENST00000629346 THSD7AQ9UPZ6 1657 aa18.04■□□□□ 0.48
CHD2-218ENST00000629346 RRBP1Q9P2E9 1410 aaKnown RBP18.04■□□□□ 0.48
CHD2-218ENST00000629346 ZNF784Q8NCA9 323 aaPredicted RBP18.03■□□□□ 0.48
CHD2-218ENST00000629346 YTHDC2Q9H6S0 1430 aaKnown RBP18.03■□□□□ 0.48
CHD2-218ENST00000629346 IFT172Q9UG01 1749 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms