RNA–Protein interactions for RNA: ENST00000629303.2

UBE2A-209, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 4

Gene UBE2A, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-209ENST00000629303 KNDC1Q76NI1 1749 aa16.29■□□□□ 0.2
UBE2A-209ENST00000629303 ADAMTS2O95450 1211 aa16.29■□□□□ 0.2
UBE2A-209ENST00000629303 LRRC59Q96AG4 307 aaKnown RBP16.29■□□□□ 0.2
UBE2A-209ENST00000629303 MARF1Q9Y4F3 1742 aaKnown RBP16.28■□□□□ 0.2
UBE2A-209ENST00000629303 TECPR2O15040 1411 aa16.28■□□□□ 0.2
UBE2A-209ENST00000629303 FMN2Q9NZ56 1722 aa16.27■□□□□ 0.19
UBE2A-209ENST00000629303 ATRNO75882 1429 aa16.27■□□□□ 0.19
UBE2A-209ENST00000629303 QTRT2Q9H974 415 aaKnown RBP16.26■□□□□ 0.19
UBE2A-209ENST00000629303 XPCQ01831 940 aaPredicted RBP16.25■□□□□ 0.19
UBE2A-209ENST00000629303 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
UBE2A-209ENST00000629303 PIK3C2GO75747 1445 aa16.25■□□□□ 0.19
UBE2A-209ENST00000629303 BCL9LQ86UU0 1499 aa16.24■□□□□ 0.19
UBE2A-209ENST00000629303 VGFO15240 615 aaPredicted RBP16.23■□□□□ 0.19
UBE2A-209ENST00000629303 RBM6P78332 1123 aaKnown RBP16.23■□□□□ 0.19
UBE2A-209ENST00000629303 RPGRIP1LQ68CZ1 1315 aa16.22■□□□□ 0.19
UBE2A-209ENST00000629303 GLI3P10071 1580 aa16.22■□□□□ 0.19
UBE2A-209ENST00000629303 WAPLQ7Z5K2 1190 aa16.22■□□□□ 0.19
UBE2A-209ENST00000629303 ABCA3Q99758 1704 aa16.22■□□□□ 0.19
UBE2A-209ENST00000629303 NUTM2FA1L443 756 aa16.21■□□□□ 0.19
UBE2A-209ENST00000629303 LRPPRCP42704 1394 aaKnown RBP16.21■□□□□ 0.19
UBE2A-209ENST00000629303 RGPD8O14715 1765 aaPredicted RBP16.21■□□□□ 0.18
UBE2A-209ENST00000629303 CCDC144AA2RUR9 1427 aa16.2■□□□□ 0.18
UBE2A-209ENST00000629303 TMEM132EQ6IEE7 984 aa16.2■□□□□ 0.18
UBE2A-209ENST00000629303 NGLY1Q96IV0 654 aa16.2■□□□□ 0.18
UBE2A-209ENST00000629303 USP32Q8NFA0 1604 aa16.19■□□□□ 0.18
UBE2A-209ENST00000629303 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.19■□□□□ 0.18
UBE2A-209ENST00000629303 NRXN1Q9ULB1 1477 aa16.19■□□□□ 0.18
UBE2A-209ENST00000629303 FNBP4Q8N3X1 1017 aaPredicted RBP16.19■□□□□ 0.18
UBE2A-209ENST00000629303 STK26Q9P289 416 aa16.19■□□□□ 0.18
UBE2A-209ENST00000629303 USP21Q9UK80 565 aa16.18■□□□□ 0.18
UBE2A-209ENST00000629303 YTHDC2Q9H6S0 1430 aaKnown RBP16.18■□□□□ 0.18
UBE2A-209ENST00000629303 KIF1AQ12756 1690 aa16.18■□□□□ 0.18
UBE2A-209ENST00000629303 FOXO3O43524 673 aa16.17■□□□□ 0.18
UBE2A-209ENST00000629303 RGL3Q3MIN7 710 aa16.17■□□□□ 0.18
UBE2A-209ENST00000629303 ESCO1Q5FWF5 840 aa16.17■□□□□ 0.18
UBE2A-209ENST00000629303 SLIT2O94813 1529 aa16.16■□□□□ 0.18
UBE2A-209ENST00000629303 ABCC11Q96J66 1382 aa16.15■□□□□ 0.18
UBE2A-209ENST00000629303 PLCH1Q4KWH8 1693 aa16.15■□□□□ 0.18
UBE2A-209ENST00000629303 NPHP3Q7Z494 1330 aa16.15■□□□□ 0.18
UBE2A-209ENST00000629303 BRWD3Q6RI45 1802 aa16.15■□□□□ 0.18
UBE2A-209ENST00000629303 RALGAPBQ86X10 1494 aa16.14■□□□□ 0.17
UBE2A-209ENST00000629303 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
UBE2A-209ENST00000629303 MPHOSPH9Q99550 1183 aa16.13■□□□□ 0.17
UBE2A-209ENST00000629303 TRPC5Q9UL62 973 aaPredicted RBP16.13■□□□□ 0.17
UBE2A-209ENST00000629303 ADGRB1O14514 1584 aa16.13■□□□□ 0.17
UBE2A-209ENST00000629303 ANKRD30BQ9BXX2 1392 aa16.13■□□□□ 0.17
UBE2A-209ENST00000629303 TRPM3Q9HCF6 1732 aaPredicted RBP16.11■□□□□ 0.17
UBE2A-209ENST00000629303 SPATA31A3Q5VYP0 1347 aa16.11■□□□□ 0.17
UBE2A-209ENST00000629303 ADGRB2O60241 1585 aa16.1■□□□□ 0.17
UBE2A-209ENST00000629303 NRAPQ86VF7 1730 aa16.1■□□□□ 0.17
UBE2A-209ENST00000629303 TNS3Q68CZ2 1445 aa16.1■□□□□ 0.17
UBE2A-209ENST00000629303 CRYBG1Q9Y4K1 1723 aa16.09■□□□□ 0.17
UBE2A-209ENST00000629303 CFAP70Q5T0N1 1121 aa16.08■□□□□ 0.16
UBE2A-209ENST00000629303 CABLES1Q8TDN4 633 aa16.07■□□□□ 0.16
UBE2A-209ENST00000629303 ALS2Q96Q42 1657 aa16.07■□□□□ 0.16
UBE2A-209ENST00000629303 DLC1Q96QB1 1528 aa16.06■□□□□ 0.16
UBE2A-209ENST00000629303 SAFB2Q14151 953 aaKnown RBP eCLIP16.06■□□□□ 0.16
UBE2A-209ENST00000629303 GJD4Q96KN9 370 aaPredicted RBP16.06■□□□□ 0.16
UBE2A-209ENST00000629303 NWD2Q9ULI1 1742 aa16.05■□□□□ 0.16
UBE2A-209ENST00000629303 C14orf93Q9H972 538 aaKnown RBP16.05■□□□□ 0.16
UBE2A-209ENST00000629303 PLEKHG5O94827 1062 aa16.04■□□□□ 0.16
UBE2A-209ENST00000629303 PRR36Q9H6K5 1346 aa16.03■□□□□ 0.16
UBE2A-209ENST00000629303 KRT28Q7Z3Y7 464 aa16.03■□□□□ 0.16
UBE2A-209ENST00000629303 UNC5CLQ8IV45 518 aa16.03■□□□□ 0.16
UBE2A-209ENST00000629303 PRAM1Q96QH2 718 aa16.03■□□□□ 0.16
UBE2A-209ENST00000629303 PHF8Q9UPP1 1060 aa16.02■□□□□ 0.16
UBE2A-209ENST00000629303 RAB3GAP2Q9H2M9 1393 aa16.01■□□□□ 0.15
UBE2A-209ENST00000629303 ARHGEF28Q8N1W1 1705 aaKnown RBP16.01■□□□□ 0.15
UBE2A-209ENST00000629303 DEFB132Q7Z7B7 95 aa16■□□□□ 0.15
UBE2A-209ENST00000629303 SBNO1A3KN83 1393 aa16■□□□□ 0.15
UBE2A-209ENST00000629303 TULP4Q9NRJ4 1543 aa15.99■□□□□ 0.15
UBE2A-209ENST00000629303 SIRT1Q96EB6 747 aa15.99■□□□□ 0.15
UBE2A-209ENST00000629303 ANKARQ7Z5J8 1434 aa15.99■□□□□ 0.15
UBE2A-209ENST00000629303 BLMP54132 1417 aaPredicted RBP15.98■□□□□ 0.15
UBE2A-209ENST00000629303 PMFBP1Q8TBY8 1022 aa15.98■□□□□ 0.15
UBE2A-209ENST00000629303 HIRIP3Q9BW71 556 aaPredicted RBP15.98■□□□□ 0.15
UBE2A-209ENST00000629303 THSD7AQ9UPZ6 1657 aa15.97■□□□□ 0.15
UBE2A-209ENST00000629303 DHX57Q6P158 1386 aaKnown RBP15.97■□□□□ 0.15
UBE2A-209ENST00000629303 ATP7BP35670 1465 aa15.97■□□□□ 0.15
UBE2A-209ENST00000629303 VPS72Q15906 364 aa15.96■□□□□ 0.15
UBE2A-209ENST00000629303 SEPT12Q8IYM1 358 aa15.96■□□□□ 0.15
UBE2A-209ENST00000629303 PHRF1Q9P1Y6 1649 aaKnown RBP15.96■□□□□ 0.15
UBE2A-209ENST00000629303 TOPAZ1Q8N9V7 1692 aa15.95■□□□□ 0.14
UBE2A-209ENST00000629303 FAM83GA6ND36 823 aa15.95■□□□□ 0.14
UBE2A-209ENST00000629303 COL14A1Q05707 1796 aaKnown RBP15.95■□□□□ 0.14
UBE2A-209ENST00000629303 MINK1Q8N4C8 1332 aaPredicted RBP15.94■□□□□ 0.14
UBE2A-209ENST00000629303 TNS1Q9HBL0 1735 aaKnown RBP15.94■□□□□ 0.14
UBE2A-209ENST00000629303 ARHGEF10O15013 1369 aa15.94■□□□□ 0.14
UBE2A-209ENST00000629303 TRAK1Q9UPV9 953 aa15.93■□□□□ 0.14
UBE2A-209ENST00000629303 LMOD2Q6P5Q4 547 aa15.92■□□□□ 0.14
UBE2A-209ENST00000629303 ZRANB1Q9UGI0 708 aa15.92■□□□□ 0.14
UBE2A-209ENST00000629303 LRP5O75197 1615 aa15.92■□□□□ 0.14
UBE2A-209ENST00000629303 ACIN1Q9UKV3 1341 aaKnown RBP15.92■□□□□ 0.14
UBE2A-209ENST00000629303 ONECUT3O60422 494 aaPredicted RBP15.91■□□□□ 0.14
UBE2A-209ENST00000629303 FAM182BQ5T319 152 aa15.9■□□□□ 0.14
UBE2A-209ENST00000629303 ITSN1Q15811 1721 aa15.89■□□□□ 0.13
UBE2A-209ENST00000629303 NRKQ7Z2Y5 1582 aa15.89■□□□□ 0.13
UBE2A-209ENST00000629303 POGKQ9P215 609 aa15.89■□□□□ 0.13
UBE2A-209ENST00000629303 HAP1P54257 671 aaPredicted RBP15.88■□□□□ 0.13
UBE2A-209ENST00000629303 PSME1Q06323 249 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms