RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 NLRP7Q8WX94 980 aa4.19□□□□□ -1.74
SPTAN1-216ENST00000629047 ARIH1Q9Y4X5 557 aaPredicted RBP4.19□□□□□ -1.74
SPTAN1-216ENST00000629047 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
SPTAN1-216ENST00000629047 DCAF8L2P0C7V8 631 aa4.18□□□□□ -1.74
SPTAN1-216ENST00000629047 FECHP22830 423 aa4.18□□□□□ -1.74
SPTAN1-216ENST00000629047 RASSF7Q02833 373 aa4.18□□□□□ -1.74
SPTAN1-216ENST00000629047 ZBTB24O43167 697 aaPredicted RBP4.17□□□□□ -1.74
SPTAN1-216ENST00000629047 GDF11O95390 407 aa4.17□□□□□ -1.74
SPTAN1-216ENST00000629047 ALDH1A1P00352 501 aa4.17□□□□□ -1.74
SPTAN1-216ENST00000629047 RC3H1Q5TC82 1133 aaKnown RBP4.17□□□□□ -1.74
SPTAN1-216ENST00000629047 TMEM151AQ8N4L1 468 aa4.17□□□□□ -1.74
SPTAN1-216ENST00000629047 FMNL1O95466 1100 aaPredicted RBP4.16□□□□□ -1.74
SPTAN1-216ENST00000629047 GPAT2Q6NUI2 795 aa4.16□□□□□ -1.74
SPTAN1-216ENST00000629047 BRICD5Q6PL45 260 aa4.16□□□□□ -1.74
SPTAN1-216ENST00000629047 NPAS3Q8IXF0 933 aa4.16□□□□□ -1.74
SPTAN1-216ENST00000629047 ZFP42Q96MM3 310 aa4.16□□□□□ -1.74
SPTAN1-216ENST00000629047 KRTAP9-2Q9BYQ4 174 aa4.16□□□□□ -1.74
SPTAN1-216ENST00000629047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.15□□□□□ -1.75
SPTAN1-216ENST00000629047 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.75
SPTAN1-216ENST00000629047 CAPN5O15484 640 aaPredicted RBP4.15□□□□□ -1.75
SPTAN1-216ENST00000629047 KRT76Q01546 638 aa4.15□□□□□ -1.75
SPTAN1-216ENST00000629047 PXYLP1Q8TE99 480 aa4.15□□□□□ -1.75
SPTAN1-216ENST00000629047 VSIG8P0DPA2 414 aa4.14□□□□□ -1.75
SPTAN1-216ENST00000629047 MSS51Q4VC12 460 aa4.14□□□□□ -1.75
SPTAN1-216ENST00000629047 RDH13Q8NBN7 331 aa4.14□□□□□ -1.75
SPTAN1-216ENST00000629047 DDX11L8A8MPP1 907 aa4.12□□□□□ -1.75
SPTAN1-216ENST00000629047 SIAH2O43255 324 aa4.12□□□□□ -1.75
SPTAN1-216ENST00000629047 ATP6V1AP38606 617 aa4.12□□□□□ -1.75
SPTAN1-216ENST00000629047 MMP16P51512 607 aa4.12□□□□□ -1.75
SPTAN1-216ENST00000629047 CCDC24Q8N4L8 307 aa4.12□□□□□ -1.75
SPTAN1-216ENST00000629047 HLA-CQ95604 372 aa4.12□□□□□ -1.75
SPTAN1-216ENST00000629047 PURBQ96QR8 312 aaKnown RBP4.12□□□□□ -1.75
SPTAN1-216ENST00000629047 ADAMTS8Q9UP79 889 aa4.12□□□□□ -1.75
SPTAN1-216ENST00000629047 NUTM2FA1L443 756 aa4.11□□□□□ -1.75
SPTAN1-216ENST00000629047 METTL3Q86U44 580 aaKnown RBP4.11□□□□□ -1.75
SPTAN1-216ENST00000629047 GPR161Q8N6U8 529 aaKnown RBP4.11□□□□□ -1.75
SPTAN1-216ENST00000629047 REPIN1Q9BWE0 567 aaKnown RBP4.11□□□□□ -1.75
SPTAN1-216ENST00000629047 TLL2Q9Y6L7 1015 aa4.11□□□□□ -1.75
SPTAN1-216ENST00000629047 DXOO77932 396 aaKnown RBP4.1□□□□□ -1.75
SPTAN1-216ENST00000629047 IRS1P35568 1242 aa4.1□□□□□ -1.75
SPTAN1-216ENST00000629047 KRTAP1-3Q8IUG1 177 aa4.1□□□□□ -1.75
SPTAN1-216ENST00000629047 WHAMMQ8TF30 809 aa4.1□□□□□ -1.75
SPTAN1-216ENST00000629047 GCGRP47871 477 aa4.09□□□□□ -1.75
SPTAN1-216ENST00000629047 PTCRAQ6ISU1 281 aaPredicted RBP4.09□□□□□ -1.75
SPTAN1-216ENST00000629047 PPFIA3O75145 1194 aa4.08□□□□□ -1.76
SPTAN1-216ENST00000629047 ZNF385CQ66K41 422 aaPredicted RBP4.08□□□□□ -1.76
SPTAN1-216ENST00000629047 MRPL14Q6P1L8 145 aaKnown RBP4.08□□□□□ -1.76
SPTAN1-216ENST00000629047 CNTNAP3BQ96NU0 1288 aa4.08□□□□□ -1.76
SPTAN1-216ENST00000629047 PHOX2BQ99453 314 aa4.08□□□□□ -1.76
SPTAN1-216ENST00000629047 CNTNAP3Q9BZ76 1288 aa4.08□□□□□ -1.76
SPTAN1-216ENST00000629047 SALL2Q9Y467 1007 aaPredicted RBP4.08□□□□□ -1.76
SPTAN1-216ENST00000629047 WASF2Q9Y6W5 498 aa4.08□□□□□ -1.76
SPTAN1-216ENST00000629047 WNT7BP56706 349 aa4.07□□□□□ -1.76
SPTAN1-216ENST00000629047 EHBP1Q8NDI1 1231 aa4.07□□□□□ -1.76
SPTAN1-216ENST00000629047 PSMG3-AS1Q96PY0 264 aa4.07□□□□□ -1.76
SPTAN1-216ENST00000629047 ITGB2P05107 769 aa4.06□□□□□ -1.76
SPTAN1-216ENST00000629047 TIMP2P16035 220 aa4.06□□□□□ -1.76
SPTAN1-216ENST00000629047 GUCA2AQ02747 115 aa4.06□□□□□ -1.76
SPTAN1-216ENST00000629047 RNFT1Q5M7Z0 435 aa4.06□□□□□ -1.76
SPTAN1-216ENST00000629047 WDR70Q9NW82 654 aa4.06□□□□□ -1.76
SPTAN1-216ENST00000629047 DAXXQ9UER7 740 aaPredicted RBP4.06□□□□□ -1.76
SPTAN1-216ENST00000629047 DNMT3AQ9Y6K1 912 aaPredicted RBP4.06□□□□□ -1.76
SPTAN1-216ENST00000629047 ADAM23O75077 832 aa4.05□□□□□ -1.76
SPTAN1-216ENST00000629047 FCHSD2O94868 740 aa4.05□□□□□ -1.76
SPTAN1-216ENST00000629047 SH3BP2P78314 561 aa4.05□□□□□ -1.76
SPTAN1-216ENST00000629047 NNTQ13423 1086 aa4.05□□□□□ -1.76
SPTAN1-216ENST00000629047 LINC01559Q495D7 138 aa4.05□□□□□ -1.76
SPTAN1-216ENST00000629047 C6orf118Q5T5N4 469 aa4.05□□□□□ -1.76
SPTAN1-216ENST00000629047 SYMPKQ92797 1274 aaKnown RBP4.05□□□□□ -1.76
SPTAN1-216ENST00000629047 USB1Q9BQ65 265 aaKnown RBP4.05□□□□□ -1.76
SPTAN1-216ENST00000629047 OATP04181 439 aa4.04□□□□□ -1.76
SPTAN1-216ENST00000629047 WDR4P57081 412 aaKnown RBP4.04□□□□□ -1.76
SPTAN1-216ENST00000629047 RSPH4AQ5TD94 716 aa4.04□□□□□ -1.76
SPTAN1-216ENST00000629047 ZFAND3Q9H8U3 227 aa4.04□□□□□ -1.76
SPTAN1-216ENST00000629047 RNF225M0QZC1 329 aaPredicted RBP4.03□□□□□ -1.76
SPTAN1-216ENST00000629047 SVOPQ8N4V2 548 aa4.03□□□□□ -1.76
SPTAN1-216ENST00000629047 MAN1A2O60476 641 aa4.02□□□□□ -1.77
SPTAN1-216ENST00000629047 ARHGEF15O94989 841 aa4.02□□□□□ -1.77
SPTAN1-216ENST00000629047 SCARF1Q14162 830 aa4.02□□□□□ -1.77
SPTAN1-216ENST00000629047 KCNV2Q8TDN2 545 aa4.02□□□□□ -1.77
SPTAN1-216ENST00000629047 KLF16Q9BXK1 252 aaPredicted RBP4.02□□□□□ -1.77
SPTAN1-216ENST00000629047 COL25A1Q9BXS0 654 aaPredicted RBP4.02□□□□□ -1.77
SPTAN1-216ENST00000629047 DNMT3LQ9UJW3 386 aa4.02□□□□□ -1.77
SPTAN1-216ENST00000629047 GPR37O15354 613 aa4.01□□□□□ -1.77
SPTAN1-216ENST00000629047 IGHA1P01876 353 aa4.01□□□□□ -1.77
SPTAN1-216ENST00000629047 JUNDP17535 347 aa4.01□□□□□ -1.77
SPTAN1-216ENST00000629047 PLA2G4EQ3MJ16 856 aa4.01□□□□□ -1.77
SPTAN1-216ENST00000629047 ADH1CP00326 375 aa4□□□□□ -1.77
SPTAN1-216ENST00000629047 Q3C1V9 767 aa4□□□□□ -1.77
SPTAN1-216ENST00000629047 Q8N3U1 123 aa4□□□□□ -1.77
SPTAN1-216ENST00000629047 SPOCK3Q9BQ16 436 aa4□□□□□ -1.77
SPTAN1-216ENST00000629047 NUDT12Q9BQG2 462 aa4□□□□□ -1.77
SPTAN1-216ENST00000629047 PROCP04070 461 aa3.99□□□□□ -1.77
SPTAN1-216ENST00000629047 RBM26Q5T8P6 1007 aaKnown RBP3.99□□□□□ -1.77
SPTAN1-216ENST00000629047 ITPKCQ96DU7 683 aa3.99□□□□□ -1.77
SPTAN1-216ENST00000629047 ZIC2O95409 532 aaPredicted RBP3.98□□□□□ -1.77
SPTAN1-216ENST00000629047 NR3C2P08235 984 aa3.98□□□□□ -1.77
SPTAN1-216ENST00000629047 CD46P15529 392 aa3.98□□□□□ -1.77
SPTAN1-216ENST00000629047 HIC1Q14526 733 aa3.98□□□□□ -1.77
SPTAN1-216ENST00000629047 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms