RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 POLR3EQ9NVU0 708 aa5.59□□□□□ -1.51
SCARNA4-201ENST00000629045 PCDHB15Q9Y5E8 787 aa5.59□□□□□ -1.51
SCARNA4-201ENST00000629045 C6orf229H3BNL8 230 aa5.58□□□□□ -1.52
SCARNA4-201ENST00000629045 PPEF1O14829 653 aaPredicted RBP5.58□□□□□ -1.52
SCARNA4-201ENST00000629045 Q3C1V9 767 aa5.58□□□□□ -1.52
SCARNA4-201ENST00000629045 RIC3Q7Z5B4 369 aa5.58□□□□□ -1.52
SCARNA4-201ENST00000629045 FAM160A2Q8N612 972 aaPredicted RBP5.58□□□□□ -1.52
SCARNA4-201ENST00000629045 CABLES1Q8TDN4 633 aa5.58□□□□□ -1.52
SCARNA4-201ENST00000629045 SLC6A16Q9GZN6 736 aa5.58□□□□□ -1.52
SCARNA4-201ENST00000629045 RNF223E7ERA6 249 aa5.57□□□□□ -1.52
SCARNA4-201ENST00000629045 SPTLC1O15269 473 aa5.57□□□□□ -1.52
SCARNA4-201ENST00000629045 CLK2P49760 499 aaKnown RBP5.57□□□□□ -1.52
SCARNA4-201ENST00000629045 DIXDC1Q155Q3 683 aa5.57□□□□□ -1.52
SCARNA4-201ENST00000629045 QPCTQ16769 361 aa5.57□□□□□ -1.52
SCARNA4-201ENST00000629045 USB1Q9BQ65 265 aaKnown RBP5.57□□□□□ -1.52
SCARNA4-201ENST00000629045 SALL2Q9Y467 1007 aaPredicted RBP5.57□□□□□ -1.52
SCARNA4-201ENST00000629045 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.56□□□□□ -1.52
SCARNA4-201ENST00000629045 HRCP23327 699 aa5.55□□□□□ -1.52
SCARNA4-201ENST00000629045 GGCXP38435 758 aa5.55□□□□□ -1.52
SCARNA4-201ENST00000629045 MTMR2Q13614 643 aa5.55□□□□□ -1.52
SCARNA4-201ENST00000629045 MSS51Q4VC12 460 aa5.55□□□□□ -1.52
SCARNA4-201ENST00000629045 SH3D19Q5HYK7 790 aa5.55□□□□□ -1.52
SCARNA4-201ENST00000629045 FBXO31Q5XUX0 539 aaPredicted RBP5.55□□□□□ -1.52
SCARNA4-201ENST00000629045 RETREG3Q86VR2 466 aa5.55□□□□□ -1.52
SCARNA4-201ENST00000629045 PROCA1Q8NCQ7 364 aaPredicted RBP5.55□□□□□ -1.52
SCARNA4-201ENST00000629045 RSPH6AQ9H0K4 717 aa5.55□□□□□ -1.52
SCARNA4-201ENST00000629045 FCF1Q9Y324 198 aaKnown RBP5.55□□□□□ -1.52
SCARNA4-201ENST00000629045 CFAP99D6REC4 459 aa5.54□□□□□ -1.52
SCARNA4-201ENST00000629045 GJA5P36382 358 aa5.54□□□□□ -1.52
SCARNA4-201ENST00000629045 PLA2G2CQ5R387 149 aa5.54□□□□□ -1.52
SCARNA4-201ENST00000629045 ZBTB3Q9H5J0 574 aa5.54□□□□□ -1.52
SCARNA4-201ENST00000629045 ATP1B4Q9UN42 357 aaPredicted RBP5.54□□□□□ -1.52
SCARNA4-201ENST00000629045 DXOO77932 396 aaKnown RBP5.53□□□□□ -1.52
SCARNA4-201ENST00000629045 SKIV2LQ15477 1246 aaKnown RBP5.53□□□□□ -1.52
SCARNA4-201ENST00000629045 PRR7Q8TB68 274 aa5.53□□□□□ -1.52
SCARNA4-201ENST00000629045 TSC1Q92574 1164 aa5.53□□□□□ -1.52
SCARNA4-201ENST00000629045 EMID1Q96A84 441 aaPredicted RBP5.53□□□□□ -1.52
SCARNA4-201ENST00000629045 NUTM2BA6NNL0 878 aaPredicted RBP5.52□□□□□ -1.53
SCARNA4-201ENST00000629045 NUTM2EB1AL46 878 aaPredicted RBP5.52□□□□□ -1.53
SCARNA4-201ENST00000629045 LILRB3O75022 631 aa5.52□□□□□ -1.53
SCARNA4-201ENST00000629045 JUNDP17535 347 aa5.52□□□□□ -1.53
SCARNA4-201ENST00000629045 MMP16P51512 607 aa5.52□□□□□ -1.53
SCARNA4-201ENST00000629045 RTL5Q5HYW3 569 aaPredicted RBP5.52□□□□□ -1.53
SCARNA4-201ENST00000629045 NUTM2DQ5VT03 806 aaPredicted RBP5.52□□□□□ -1.53
SCARNA4-201ENST00000629045 NUTM2AQ8IVF1 878 aaPredicted RBP5.52□□□□□ -1.53
SCARNA4-201ENST00000629045 ANKLE1Q8NAG6 615 aa5.52□□□□□ -1.53
SCARNA4-201ENST00000629045 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.52□□□□□ -1.53
SCARNA4-201ENST00000629045 PRPF38BQ5VTL8 546 aaKnown RBP5.51□□□□□ -1.53
SCARNA4-201ENST00000629045 PRKD2Q9BZL6 878 aa5.51□□□□□ -1.53
SCARNA4-201ENST00000629045 SPDYE5A6NIY4 337 aa5.5□□□□□ -1.53
SCARNA4-201ENST00000629045 PER1O15534 1290 aaPredicted RBP5.5□□□□□ -1.53
SCARNA4-201ENST00000629045 TUSC1Q2TAM9 212 aa5.5□□□□□ -1.53
SCARNA4-201ENST00000629045 LIAT1Q6ZQX7 453 aa5.5□□□□□ -1.53
SCARNA4-201ENST00000629045 CCDC24Q8N4L8 307 aa5.5□□□□□ -1.53
SCARNA4-201ENST00000629045 PCMTD1Q96MG8 357 aaPredicted RBP5.5□□□□□ -1.53
SCARNA4-201ENST00000629045 NUDT12Q9BQG2 462 aa5.49□□□□□ -1.53
SCARNA4-201ENST00000629045 CCNYL3P0C7X3 344 aa5.48□□□□□ -1.53
SCARNA4-201ENST00000629045 SLC19A1P41440 591 aa5.48□□□□□ -1.53
SCARNA4-201ENST00000629045 RFC5P40937 340 aa5.47□□□□□ -1.53
SCARNA4-201ENST00000629045 PTPRNQ16849 979 aa5.47□□□□□ -1.53
SCARNA4-201ENST00000629045 HELBQ8NG08 1087 aaPredicted RBP5.47□□□□□ -1.53
SCARNA4-201ENST00000629045 GOPCQ9HD26 462 aa5.47□□□□□ -1.53
SCARNA4-201ENST00000629045 MAP10Q9P2G4 905 aa5.47□□□□□ -1.53
SCARNA4-201ENST00000629045 AP1G2O75843 785 aa5.46□□□□□ -1.54
SCARNA4-201ENST00000629045 RGS20O76081 388 aa5.46□□□□□ -1.54
SCARNA4-201ENST00000629045 CTDSPL2Q05D32 466 aa5.46□□□□□ -1.54
SCARNA4-201ENST00000629045 PPP2R2DQ66LE6 453 aa5.46□□□□□ -1.54
SCARNA4-201ENST00000629045 DESI1Q6ICB0 168 aa5.46□□□□□ -1.54
SCARNA4-201ENST00000629045 PTCRAQ6ISU1 281 aaPredicted RBP5.46□□□□□ -1.54
SCARNA4-201ENST00000629045 LYPD8Q6UX82 237 aa5.46□□□□□ -1.54
SCARNA4-201ENST00000629045 V9GY48 417 aaPredicted RBP5.46□□□□□ -1.54
SCARNA4-201ENST00000629045 CTHP32929 405 aa5.45□□□□□ -1.54
SCARNA4-201ENST00000629045 TRIM32Q13049 653 aa5.45□□□□□ -1.54
SCARNA4-201ENST00000629045 ZNF697Q5TEC3 545 aa5.45□□□□□ -1.54
SCARNA4-201ENST00000629045 SPRYD7Q5W111 196 aa5.45□□□□□ -1.54
SCARNA4-201ENST00000629045 LRRN4Q8WUT4 740 aa5.45□□□□□ -1.54
SCARNA4-201ENST00000629045 F12P00748 615 aaPredicted RBP5.44□□□□□ -1.54
SCARNA4-201ENST00000629045 USP17L8P0C7I0 530 aa5.44□□□□□ -1.54
SCARNA4-201ENST00000629045 LINC01559Q495D7 138 aa5.44□□□□□ -1.54
SCARNA4-201ENST00000629045 TRIM67Q6ZTA4 783 aa5.44□□□□□ -1.54
SCARNA4-201ENST00000629045 UNC93B1Q9H1C4 597 aa5.44□□□□□ -1.54
SCARNA4-201ENST00000629045 HMX1Q9NP08 348 aaPredicted RBP5.44□□□□□ -1.54
SCARNA4-201ENST00000629045 TNFRSF10AO00220 468 aa5.43□□□□□ -1.54
SCARNA4-201ENST00000629045 ZBTB24O43167 697 aaPredicted RBP5.43□□□□□ -1.54
SCARNA4-201ENST00000629045 RPIAP49247 311 aa5.43□□□□□ -1.54
SCARNA4-201ENST00000629045 KCNH2Q12809 1159 aa5.43□□□□□ -1.54
SCARNA4-201ENST00000629045 EVA1BQ9NVM1 165 aa5.43□□□□□ -1.54
SCARNA4-201ENST00000629045 SKOR1P84550 965 aa5.42□□□□□ -1.54
SCARNA4-201ENST00000629045 FOXC1Q12948 553 aa5.42□□□□□ -1.54
SCARNA4-201ENST00000629045 ZNF598Q86UK7 904 aaKnown RBP5.42□□□□□ -1.54
SCARNA4-201ENST00000629045 EPS8L1Q8TE68 723 aa5.41□□□□□ -1.54
SCARNA4-201ENST00000629045 BAP1Q92560 729 aa5.41□□□□□ -1.54
SCARNA4-201ENST00000629045 CD2BP2O95400 341 aaKnown RBP5.4□□□□□ -1.54
SCARNA4-201ENST00000629045 NR6A1Q15406 480 aa5.4□□□□□ -1.54
SCARNA4-201ENST00000629045 PKD2L1Q9P0L9 805 aa5.4□□□□□ -1.54
SCARNA4-201ENST00000629045 GDF9O60383 454 aa5.39□□□□□ -1.55
SCARNA4-201ENST00000629045 SH3BP2P78314 561 aa5.39□□□□□ -1.55
SCARNA4-201ENST00000629045 ZNF511Q8NB15 262 aa5.39□□□□□ -1.55
SCARNA4-201ENST00000629045 IRX2Q9BZI1 471 aaPredicted RBP5.39□□□□□ -1.55
SCARNA4-201ENST00000629045 PDZRN3Q9UPQ7 1066 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms