RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 ZEB1P37275 1124 aaPredicted RBP14.08□□□□□ -0.16
SOX2-OT-249ENST00000628810 MKRN4PQ13434 485 aaPredicted RBP14.08□□□□□ -0.16
SOX2-OT-249ENST00000628810 SLC26A8Q96RN1 970 aa14.08□□□□□ -0.16
SOX2-OT-249ENST00000628810 DLC1Q96QB1 1528 aa14.08□□□□□ -0.16
SOX2-OT-249ENST00000628810 PTCH1Q13635 1447 aa14.07□□□□□ -0.16
SOX2-OT-249ENST00000628810 NKTRP30414 1462 aaKnown RBP14.07□□□□□ -0.16
SOX2-OT-249ENST00000628810 LRPPRCP42704 1394 aaKnown RBP14.07□□□□□ -0.16
SOX2-OT-249ENST00000628810 YTHDC2Q9H6S0 1430 aaKnown RBP14.07□□□□□ -0.16
SOX2-OT-249ENST00000628810 STRCP1A6NGW2 1772 aa14.06□□□□□ -0.16
SOX2-OT-249ENST00000628810 ARHGEF28Q8N1W1 1705 aaKnown RBP14.06□□□□□ -0.16
SOX2-OT-249ENST00000628810 ROCK2O75116 1388 aaKnown RBP14.06□□□□□ -0.16
SOX2-OT-249ENST00000628810 BCANQ96GW7 911 aa14.05□□□□□ -0.16
SOX2-OT-249ENST00000628810 ABCC11Q96J66 1382 aa14.05□□□□□ -0.16
SOX2-OT-249ENST00000628810 NBPF1Q3BBV0 1214 aa14.04□□□□□ -0.16
SOX2-OT-249ENST00000628810 FAM135BQ49AJ0 1406 aa14.03□□□□□ -0.16
SOX2-OT-249ENST00000628810 LTBP4Q8N2S1 1624 aa14.03□□□□□ -0.16
SOX2-OT-249ENST00000628810 KCNA6P17658 529 aa14.02□□□□□ -0.17
SOX2-OT-249ENST00000628810 TMEM132EQ6IEE7 984 aa14.01□□□□□ -0.17
SOX2-OT-249ENST00000628810 SIRT1Q96EB6 747 aa14□□□□□ -0.17
SOX2-OT-249ENST00000628810 ROBO2Q9HCK4 1378 aa13.99□□□□□ -0.17
SOX2-OT-249ENST00000628810 ZNF335Q9H4Z2 1342 aaPredicted RBP13.99□□□□□ -0.17
SOX2-OT-249ENST00000628810 AMOTL2Q9Y2J4 779 aa13.99□□□□□ -0.17
SOX2-OT-249ENST00000628810 EIF3AQ14152 1382 aaKnown RBP13.98□□□□□ -0.17
SOX2-OT-249ENST00000628810 ADGRB2O60241 1585 aa13.98□□□□□ -0.17
SOX2-OT-249ENST00000628810 CARD11Q9BXL7 1154 aa13.98□□□□□ -0.17
SOX2-OT-249ENST00000628810 LRRC7Q96NW7 1537 aa13.98□□□□□ -0.17
SOX2-OT-249ENST00000628810 NCOA3Q9Y6Q9 1424 aa13.98□□□□□ -0.17
SOX2-OT-249ENST00000628810 ZNF692Q9BU19 519 aaPredicted RBP13.97□□□□□ -0.17
SOX2-OT-249ENST00000628810 QRICH2Q9H0J4 1663 aa13.97□□□□□ -0.17
SOX2-OT-249ENST00000628810 XIRP1Q702N8 1843 aaKnown RBP13.97□□□□□ -0.17
SOX2-OT-249ENST00000628810 USP47Q96K76 1375 aa13.96□□□□□ -0.17
SOX2-OT-249ENST00000628810 SBNO2Q9Y2G9 1366 aa13.96□□□□□ -0.17
SOX2-OT-249ENST00000628810 NALCNQ8IZF0 1738 aa13.96□□□□□ -0.17
SOX2-OT-249ENST00000628810 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.95□□□□□ -0.18
SOX2-OT-249ENST00000628810 CDC42BPGQ6DT37 1551 aa13.94□□□□□ -0.18
SOX2-OT-249ENST00000628810 ADGRL3Q9HAR2 1447 aa13.94□□□□□ -0.18
SOX2-OT-249ENST00000628810 STK26Q9P289 416 aa13.94□□□□□ -0.18
SOX2-OT-249ENST00000628810 TRAK1Q9UPV9 953 aa13.94□□□□□ -0.18
SOX2-OT-249ENST00000628810 PLEKHH1Q9ULM0 1364 aa13.94□□□□□ -0.18
SOX2-OT-249ENST00000628810 IQSEC2Q5JU85 1478 aa13.93□□□□□ -0.18
SOX2-OT-249ENST00000628810 PITPNM1O00562 1244 aa13.93□□□□□ -0.18
SOX2-OT-249ENST00000628810 TMEM94Q12767 1356 aa13.93□□□□□ -0.18
SOX2-OT-249ENST00000628810 CENPJQ9HC77 1338 aaPredicted RBP13.92□□□□□ -0.18
SOX2-OT-249ENST00000628810 DCCP43146 1447 aa13.92□□□□□ -0.18
SOX2-OT-249ENST00000628810 PRAM1Q96QH2 718 aa13.92□□□□□ -0.18
SOX2-OT-249ENST00000628810 SSUH2Q9Y2M2 353 aa13.91□□□□□ -0.18
SOX2-OT-249ENST00000628810 TULP4Q9NRJ4 1543 aa13.9□□□□□ -0.18
SOX2-OT-249ENST00000628810 EIF4G2P78344 907 aaKnown RBP eCLIP13.89□□□□□ -0.19
SOX2-OT-249ENST00000628810 WAPLQ7Z5K2 1190 aa13.89□□□□□ -0.19
SOX2-OT-249ENST00000628810 PROSER2Q86WR7 435 aaPredicted RBP13.89□□□□□ -0.19
SOX2-OT-249ENST00000628810 FMN2Q9NZ56 1722 aa13.88□□□□□ -0.19
SOX2-OT-249ENST00000628810 ST20-MTHFSA0A0A6YYL1 179 aa13.88□□□□□ -0.19
SOX2-OT-249ENST00000628810 TESK2Q96S53 571 aa13.88□□□□□ -0.19
SOX2-OT-249ENST00000628810 POGKQ9P215 609 aa13.88□□□□□ -0.19
SOX2-OT-249ENST00000628810 HSPA5P11021 654 aaKnown RBP13.86□□□□□ -0.19
SOX2-OT-249ENST00000628810 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
SOX2-OT-249ENST00000628810 MSH6P52701 1360 aa13.85□□□□□ -0.19
SOX2-OT-249ENST00000628810 SLC24A1O60721 1099 aa13.85□□□□□ -0.19
SOX2-OT-249ENST00000628810 C19orf44Q9H6X5 657 aa13.85□□□□□ -0.19
SOX2-OT-249ENST00000628810 USP32Q8NFA0 1604 aa13.85□□□□□ -0.19
SOX2-OT-249ENST00000628810 ANKARQ7Z5J8 1434 aa13.84□□□□□ -0.19
SOX2-OT-249ENST00000628810 SAFB2Q14151 953 aaKnown RBP eCLIP13.84□□□□□ -0.19
SOX2-OT-249ENST00000628810 PIP4P2Q8N4L2 257 aa13.84□□□□□ -0.19
SOX2-OT-249ENST00000628810 TOPAZ1Q8N9V7 1692 aa13.84□□□□□ -0.19
SOX2-OT-249ENST00000628810 ATP7BP35670 1465 aa13.83□□□□□ -0.2
SOX2-OT-249ENST00000628810 RBM33Q96EV2 1170 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-249ENST00000628810 MINK1Q8N4C8 1332 aaPredicted RBP13.83□□□□□ -0.2
SOX2-OT-249ENST00000628810 MST1RQ04912 1400 aa13.82□□□□□ -0.2
SOX2-OT-249ENST00000628810 WASLO00401 505 aaPredicted RBP13.82□□□□□ -0.2
SOX2-OT-249ENST00000628810 DISP3Q9P2K9 1392 aa13.82□□□□□ -0.2
SOX2-OT-249ENST00000628810 ITSN1Q15811 1721 aa13.81□□□□□ -0.2
SOX2-OT-249ENST00000628810 FXR2P51116 673 aaKnown RBP eCLIP13.81□□□□□ -0.2
SOX2-OT-249ENST00000628810 PUS7Q96PZ0 661 aaKnown RBP13.81□□□□□ -0.2
SOX2-OT-249ENST00000628810 HIRIP3Q9BW71 556 aaPredicted RBP13.81□□□□□ -0.2
SOX2-OT-249ENST00000628810 EVC2Q86UK5 1308 aa13.81□□□□□ -0.2
SOX2-OT-249ENST00000628810 C14orf37Q86TY3 774 aa13.8□□□□□ -0.2
SOX2-OT-249ENST00000628810 CADPS2Q86UW7 1296 aa13.8□□□□□ -0.2
SOX2-OT-249ENST00000628810 CERKQ8TCT0 537 aa13.8□□□□□ -0.2
SOX2-OT-249ENST00000628810 MYOM1P52179 1685 aa13.79□□□□□ -0.2
SOX2-OT-249ENST00000628810 TMF1P82094 1093 aa13.79□□□□□ -0.2
SOX2-OT-249ENST00000628810 C1orf167Q5SNV9 1468 aa13.79□□□□□ -0.2
SOX2-OT-249ENST00000628810 ATAD2Q6PL18 1390 aa13.78□□□□□ -0.2
SOX2-OT-249ENST00000628810 KIF1AQ12756 1690 aa13.78□□□□□ -0.2
SOX2-OT-249ENST00000628810 ATF3P18847 181 aa13.77□□□□□ -0.21
SOX2-OT-249ENST00000628810 CDK19Q9BWU1 502 aa13.77□□□□□ -0.21
SOX2-OT-249ENST00000628810 PRR36Q9H6K5 1346 aa13.77□□□□□ -0.21
SOX2-OT-249ENST00000628810 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
SOX2-OT-249ENST00000628810 NINLQ9Y2I6 1382 aa13.76□□□□□ -0.21
SOX2-OT-249ENST00000628810 CDCA8Q53HL2 280 aa13.76□□□□□ -0.21
SOX2-OT-249ENST00000628810 RGPD8O14715 1765 aaPredicted RBP13.75□□□□□ -0.21
SOX2-OT-249ENST00000628810 C11orf95C9JLR9 678 aaPredicted RBP13.74□□□□□ -0.21
SOX2-OT-249ENST00000628810 SRPK2P78362 688 aaKnown RBP13.74□□□□□ -0.21
SOX2-OT-249ENST00000628810 PPIP5K1Q6PFW1 1433 aa13.73□□□□□ -0.21
SOX2-OT-249ENST00000628810 CCDC7Q96M83 1385 aa13.73□□□□□ -0.21
SOX2-OT-249ENST00000628810 ROBO1Q9Y6N7 1651 aa13.73□□□□□ -0.21
SOX2-OT-249ENST00000628810 KIF7Q2M1P5 1343 aa13.73□□□□□ -0.21
SOX2-OT-249ENST00000628810 NHSL1Q5SYE7 1610 aa13.73□□□□□ -0.21
SOX2-OT-249ENST00000628810 NUDT16Q96DE0 195 aaKnown RBP13.73□□□□□ -0.21
SOX2-OT-249ENST00000628810 CABP2Q9NPB3 220 aa13.73□□□□□ -0.21
SOX2-OT-249ENST00000628810 POLR3AO14802 1390 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms