RNA–Protein interactions for RNA: ENST00000628324.2

LINC01170-202, Transcript of long intergenic non-protein coding RNA 1170, humanhuman

TSL 2 BASIC

Gene LINC01170, Length 650 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01170-202ENST00000628324 ATAD2Q6PL18 1390 aa12.83□□□□□ -0.36
LINC01170-202ENST00000628324 ATRNO75882 1429 aa12.83□□□□□ -0.36
LINC01170-202ENST00000628324 CCDC125Q86Z20 511 aa12.83□□□□□ -0.36
LINC01170-202ENST00000628324 NGLY1Q96IV0 654 aa12.83□□□□□ -0.36
LINC01170-202ENST00000628324 PTCH1Q13635 1447 aa12.82□□□□□ -0.36
LINC01170-202ENST00000628324 C8orf37Q96NL8 207 aa12.82□□□□□ -0.36
LINC01170-202ENST00000628324 C1orf167Q5SNV9 1468 aa12.82□□□□□ -0.36
LINC01170-202ENST00000628324 ROCK1Q13464 1354 aa12.81□□□□□ -0.36
LINC01170-202ENST00000628324 COL22A1Q8NFW1 1626 aaPredicted RBP12.81□□□□□ -0.36
LINC01170-202ENST00000628324 BCL9LQ86UU0 1499 aa12.8□□□□□ -0.36
LINC01170-202ENST00000628324 NALCNQ8IZF0 1738 aa12.8□□□□□ -0.36
LINC01170-202ENST00000628324 NUTM2DQ5VT03 806 aaPredicted RBP12.8□□□□□ -0.36
LINC01170-202ENST00000628324 DDX17Q92841 729 aaKnown RBP12.8□□□□□ -0.36
LINC01170-202ENST00000628324 TRPC5Q9UL62 973 aaPredicted RBP12.79□□□□□ -0.36
LINC01170-202ENST00000628324 MYOM2P54296 1465 aa12.78□□□□□ -0.36
LINC01170-202ENST00000628324 ZRANB1Q9UGI0 708 aa12.78□□□□□ -0.36
LINC01170-202ENST00000628324 GTF3C3Q9Y5Q9 886 aa12.78□□□□□ -0.36
LINC01170-202ENST00000628324 USP21Q9UK80 565 aa12.76□□□□□ -0.37
LINC01170-202ENST00000628324 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
LINC01170-202ENST00000628324 NEXMIFQ5QGS0 1516 aa12.75□□□□□ -0.37
LINC01170-202ENST00000628324 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
LINC01170-202ENST00000628324 DCAF8L1A6NGE4 600 aa12.73□□□□□ -0.37
LINC01170-202ENST00000628324 ADAMTS2O95450 1211 aa12.73□□□□□ -0.37
LINC01170-202ENST00000628324 ORAI2Q96SN7 254 aa12.73□□□□□ -0.37
LINC01170-202ENST00000628324 PXDNQ92626 1479 aa12.72□□□□□ -0.37
LINC01170-202ENST00000628324 ROBO2Q9HCK4 1378 aa12.72□□□□□ -0.37
LINC01170-202ENST00000628324 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.72□□□□□ -0.37
LINC01170-202ENST00000628324 SPHKAPQ2M3C7 1700 aa12.71□□□□□ -0.37
LINC01170-202ENST00000628324 MARF1Q9Y4F3 1742 aaKnown RBP12.71□□□□□ -0.37
LINC01170-202ENST00000628324 NUP155O75694 1391 aa12.71□□□□□ -0.37
LINC01170-202ENST00000628324 LRP5O75197 1615 aa12.71□□□□□ -0.37
LINC01170-202ENST00000628324 GJD4Q96KN9 370 aaPredicted RBP12.71□□□□□ -0.37
LINC01170-202ENST00000628324 SLIT2O94813 1529 aa12.71□□□□□ -0.38
LINC01170-202ENST00000628324 BLMP54132 1417 aaPredicted RBP12.71□□□□□ -0.38
LINC01170-202ENST00000628324 ONECUT3O60422 494 aaPredicted RBP12.7□□□□□ -0.38
LINC01170-202ENST00000628324 APLP2Q06481 763 aa12.69□□□□□ -0.38
LINC01170-202ENST00000628324 HFM1A2PYH4 1435 aa12.69□□□□□ -0.38
LINC01170-202ENST00000628324 GLI3P10071 1580 aa12.69□□□□□ -0.38
LINC01170-202ENST00000628324 FAM50AQ14320 339 aaKnown RBP12.68□□□□□ -0.38
LINC01170-202ENST00000628324 CLTCL1P53675 1640 aa12.67□□□□□ -0.38
LINC01170-202ENST00000628324 CDC42BPGQ6DT37 1551 aa12.67□□□□□ -0.38
LINC01170-202ENST00000628324 NPHP3Q7Z494 1330 aa12.66□□□□□ -0.38
LINC01170-202ENST00000628324 RALGAPBQ86X10 1494 aa12.65□□□□□ -0.38
LINC01170-202ENST00000628324 RRBP1Q9P2E9 1410 aaKnown RBP12.65□□□□□ -0.38
LINC01170-202ENST00000628324 TECPR2O15040 1411 aa12.64□□□□□ -0.39
LINC01170-202ENST00000628324 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
LINC01170-202ENST00000628324 UNC5CLQ8IV45 518 aa12.64□□□□□ -0.39
LINC01170-202ENST00000628324 RPGRIP1LQ68CZ1 1315 aa12.63□□□□□ -0.39
LINC01170-202ENST00000628324 BRWD3Q6RI45 1802 aa12.63□□□□□ -0.39
LINC01170-202ENST00000628324 MYCNP04198 464 aaPredicted RBP12.62□□□□□ -0.39
LINC01170-202ENST00000628324 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
LINC01170-202ENST00000628324 ZNF326Q5BKZ1 582 aaKnown RBP12.61□□□□□ -0.39
LINC01170-202ENST00000628324 KIF1BO60333 1816 aa12.6□□□□□ -0.39
LINC01170-202ENST00000628324 VPS72Q15906 364 aa12.6□□□□□ -0.39
LINC01170-202ENST00000628324 DEFB132Q7Z7B7 95 aa12.6□□□□□ -0.39
LINC01170-202ENST00000628324 LRPPRCP42704 1394 aaKnown RBP12.59□□□□□ -0.39
LINC01170-202ENST00000628324 FOXO3O43524 673 aa12.59□□□□□ -0.39
LINC01170-202ENST00000628324 USP32Q8NFA0 1604 aa12.59□□□□□ -0.39
LINC01170-202ENST00000628324 DHX57Q6P158 1386 aaKnown RBP12.58□□□□□ -0.4
LINC01170-202ENST00000628324 ESCO1Q5FWF5 840 aa12.58□□□□□ -0.4
LINC01170-202ENST00000628324 NWD2Q9ULI1 1742 aa12.58□□□□□ -0.4
LINC01170-202ENST00000628324 PPLO60437 1756 aa12.58□□□□□ -0.4
LINC01170-202ENST00000628324 ABCC11Q96J66 1382 aa12.57□□□□□ -0.4
LINC01170-202ENST00000628324 DISP2A7MBM2 1401 aa12.57□□□□□ -0.4
LINC01170-202ENST00000628324 NAIPQ13075 1403 aa12.57□□□□□ -0.4
LINC01170-202ENST00000628324 SEPT12Q8IYM1 358 aa12.57□□□□□ -0.4
LINC01170-202ENST00000628324 SIRT1Q96EB6 747 aa12.56□□□□□ -0.4
LINC01170-202ENST00000628324 MIER1Q8N108 512 aa12.55□□□□□ -0.4
LINC01170-202ENST00000628324 CCDC144AA2RUR9 1427 aa12.54□□□□□ -0.4
LINC01170-202ENST00000628324 FMN2Q9NZ56 1722 aa12.54□□□□□ -0.4
LINC01170-202ENST00000628324 KIF1AQ12756 1690 aa12.54□□□□□ -0.4
LINC01170-202ENST00000628324 XPCQ01831 940 aaPredicted RBP12.53□□□□□ -0.4
LINC01170-202ENST00000628324 IFFO2Q5TF58 517 aa12.53□□□□□ -0.4
LINC01170-202ENST00000628324 KRT27Q7Z3Y8 459 aa12.53□□□□□ -0.4
LINC01170-202ENST00000628324 KNDC1Q76NI1 1749 aa12.53□□□□□ -0.4
LINC01170-202ENST00000628324 SBNO1A3KN83 1393 aa12.53□□□□□ -0.4
LINC01170-202ENST00000628324 PLCH1Q4KWH8 1693 aa12.51□□□□□ -0.41
LINC01170-202ENST00000628324 ABCA3Q99758 1704 aa12.51□□□□□ -0.41
LINC01170-202ENST00000628324 ATXN8OSP0DMR3 200 aa12.51□□□□□ -0.41
LINC01170-202ENST00000628324 WAPLQ7Z5K2 1190 aa12.51□□□□□ -0.41
LINC01170-202ENST00000628324 TNS3Q68CZ2 1445 aa12.51□□□□□ -0.41
LINC01170-202ENST00000628324 SPATA31E1Q6ZUB1 1445 aa12.51□□□□□ -0.41
LINC01170-202ENST00000628324 FAM83GA6ND36 823 aa12.5□□□□□ -0.41
LINC01170-202ENST00000628324 KRT28Q7Z3Y7 464 aa12.5□□□□□ -0.41
LINC01170-202ENST00000628324 ADGRF5Q8IZF2 1346 aa12.5□□□□□ -0.41
LINC01170-202ENST00000628324 PLEKHH1Q9ULM0 1364 aa12.5□□□□□ -0.41
LINC01170-202ENST00000628324 NRAPQ86VF7 1730 aa12.5□□□□□ -0.41
LINC01170-202ENST00000628324 NRXN1Q9ULB1 1477 aa12.49□□□□□ -0.41
LINC01170-202ENST00000628324 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
LINC01170-202ENST00000628324 PIK3C2GO75747 1445 aa12.48□□□□□ -0.41
LINC01170-202ENST00000628324 BAG6P46379 1132 aa12.48□□□□□ -0.41
LINC01170-202ENST00000628324 IFT172Q9UG01 1749 aa12.48□□□□□ -0.41
LINC01170-202ENST00000628324 THSD7AQ9UPZ6 1657 aa12.48□□□□□ -0.41
LINC01170-202ENST00000628324 ARHGEF10O15013 1369 aa12.47□□□□□ -0.41
LINC01170-202ENST00000628324 ANKRD30BQ9BXX2 1392 aa12.47□□□□□ -0.41
LINC01170-202ENST00000628324 RGPD1P0DJD0 1748 aa12.46□□□□□ -0.41
LINC01170-202ENST00000628324 TNS1Q9HBL0 1735 aaKnown RBP12.46□□□□□ -0.41
LINC01170-202ENST00000628324 PSDA5PKW4 1024 aaPredicted RBP12.46□□□□□ -0.41
LINC01170-202ENST00000628324 CAMKK2Q96RR4 588 aa12.46□□□□□ -0.41
LINC01170-202ENST00000628324 RGPD8O14715 1765 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms