RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 PANK3Q9H999 370 aa34.24■■■■□ 3.07
CAPNS1-215ENST00000628018 ROBO2Q9HCK4 1378 aa34.24■■■■□ 3.07
CAPNS1-215ENST00000628018 PER1O15534 1290 aaPredicted RBP34.22■■■■□ 3.07
CAPNS1-215ENST00000628018 XRN1Q8IZH2 1706 aaKnown RBP34.22■■■■□ 3.07
CAPNS1-215ENST00000628018 AMOTL2Q9Y2J4 779 aa34.21■■■■□ 3.07
CAPNS1-215ENST00000628018 PRKRIP1Q9H875 184 aaPredicted RBP34.2■■■■□ 3.06
CAPNS1-215ENST00000628018 PTCH1Q13635 1447 aa34.19■■■■□ 3.06
CAPNS1-215ENST00000628018 NCKAP5LQ9HCH0 1330 aa34.18■■■■□ 3.06
CAPNS1-215ENST00000628018 CCER2I3L3R5 266 aa34.15■■■■□ 3.06
CAPNS1-215ENST00000628018 CABP2Q9NPB3 220 aa34.15■■■■□ 3.06
CAPNS1-215ENST00000628018 CHD2O14647 1828 aaKnown RBP34.15■■■■□ 3.06
CAPNS1-215ENST00000628018 LMTK3Q96Q04 1460 aa34.13■■■■□ 3.05
CAPNS1-215ENST00000628018 CDK19Q9BWU1 502 aa34.13■■■■□ 3.05
CAPNS1-215ENST00000628018 SRPK2P78362 688 aaKnown RBP34.12■■■■□ 3.05
CAPNS1-215ENST00000628018 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.11■■■■□ 3.05
CAPNS1-215ENST00000628018 ADGRB2O60241 1585 aa34.1■■■■□ 3.05
CAPNS1-215ENST00000628018 ATAD2Q6PL18 1390 aa34.1■■■■□ 3.05
CAPNS1-215ENST00000628018 WASLO00401 505 aaPredicted RBP34.08■■■■□ 3.05
CAPNS1-215ENST00000628018 SLC12A5Q9H2X9 1139 aa34.08■■■■□ 3.05
CAPNS1-215ENST00000628018 NINLQ9Y2I6 1382 aa34.07■■■■□ 3.05
CAPNS1-215ENST00000628018 TMC1Q8TDI8 760 aa34.07■■■■□ 3.04
CAPNS1-215ENST00000628018 KCNA6P17658 529 aa34.06■■■■□ 3.04
CAPNS1-215ENST00000628018 HSPA2P54652 639 aa34.05■■■■□ 3.04
CAPNS1-215ENST00000628018 KTN1Q86UP2 1357 aaKnown RBP34.05■■■■□ 3.04
CAPNS1-215ENST00000628018 KNSTRNQ9Y448 316 aa34.04■■■■□ 3.04
CAPNS1-215ENST00000628018 CARD14Q9BXL6 1004 aa34.01■■■■□ 3.04
CAPNS1-215ENST00000628018 NWD1Q149M9 1564 aa34■■■■□ 3.03
CAPNS1-215ENST00000628018 ANKRD36BQ8N2N9 1353 aa34■■■■□ 3.03
CAPNS1-215ENST00000628018 RALBP1Q15311 655 aa33.99■■■■□ 3.03
CAPNS1-215ENST00000628018 PARD3Q8TEW0 1356 aa33.98■■■■□ 3.03
CAPNS1-215ENST00000628018 CNGB1Q14028 1251 aaPredicted RBP33.98■■■■□ 3.03
CAPNS1-215ENST00000628018 AMER1Q5JTC6 1135 aaPredicted RBP33.98■■■■□ 3.03
CAPNS1-215ENST00000628018 NPC1L1Q9UHC9 1359 aa33.97■■■■□ 3.03
CAPNS1-215ENST00000628018 STRCQ7RTU9 1775 aa33.94■■■■□ 3.02
CAPNS1-215ENST00000628018 CC2D1BQ5T0F9 858 aaKnown RBP33.94■■■■□ 3.02
CAPNS1-215ENST00000628018 CD163L1Q9NR16 1453 aa33.93■■■■□ 3.02
CAPNS1-215ENST00000628018 NSD3Q9BZ95 1437 aa33.92■■■■□ 3.02
CAPNS1-215ENST00000628018 ATP7BP35670 1465 aa33.92■■■■□ 3.02
CAPNS1-215ENST00000628018 USP32Q8NFA0 1604 aa33.91■■■■□ 3.02
CAPNS1-215ENST00000628018 NUDT16Q96DE0 195 aaKnown RBP33.91■■■■□ 3.02
CAPNS1-215ENST00000628018 CABP1Q9NZU7 370 aa33.91■■■■□ 3.02
CAPNS1-215ENST00000628018 A0A1W2PP64 1363 aa33.9■■■■□ 3.02
CAPNS1-215ENST00000628018 MYBBP1AQ9BQG0 1328 aaKnown RBP33.89■■■■□ 3.02
CAPNS1-215ENST00000628018 TERF2IPQ9NYB0 399 aa33.89■■■■□ 3.02
CAPNS1-215ENST00000628018 PRR36Q9H6K5 1346 aa33.88■■■■□ 3.01
CAPNS1-215ENST00000628018 CCDC184Q52MB2 194 aa33.88■■■■□ 3.01
CAPNS1-215ENST00000628018 PPIP5K1Q6PFW1 1433 aa33.87■■■■□ 3.01
CAPNS1-215ENST00000628018 CCDC61Q9Y6R9 512 aa33.87■■■■□ 3.01
CAPNS1-215ENST00000628018 NALCNQ8IZF0 1738 aa33.86■■■■□ 3.01
CAPNS1-215ENST00000628018 TOPAZ1Q8N9V7 1692 aa33.85■■■■□ 3.01
CAPNS1-215ENST00000628018 NKTRP30414 1462 aaKnown RBP33.84■■■■□ 3.01
CAPNS1-215ENST00000628018 HDGFL2Q7Z4V5 671 aaPredicted RBP33.83■■■■□ 3.01
CAPNS1-215ENST00000628018 MRS2Q9HD23 443 aa33.81■■■■□ 3
CAPNS1-215ENST00000628018 CDC42BPGQ6DT37 1551 aa33.81■■■■□ 3
CAPNS1-215ENST00000628018 CPSF1Q10570 1443 aaKnown RBP33.8■■■■□ 3
CAPNS1-215ENST00000628018 FMN2Q9NZ56 1722 aa33.8■■■■□ 3
CAPNS1-215ENST00000628018 ADGRL3Q9HAR2 1447 aa33.8■■■■□ 3
CAPNS1-215ENST00000628018 YTHDC1Q96MU7 727 aaKnown RBP33.79■■■■□ 3
CAPNS1-215ENST00000628018 CGNL1Q0VF96 1302 aa33.79■■■■□ 3
CAPNS1-215ENST00000628018 STRCP1A6NGW2 1772 aa33.79■■■■□ 3
CAPNS1-215ENST00000628018 BRD4O60885 1362 aaPredicted RBP33.78■■■■□ 3
CAPNS1-215ENST00000628018 AEBP2Q6ZN18 517 aaPredicted RBP33.76■■■■□ 3
CAPNS1-215ENST00000628018 NLRP13Q86W25 1043 aa33.76■■■■□ 3
CAPNS1-215ENST00000628018 ANKARQ7Z5J8 1434 aa33.76■■■□□ 2.99
CAPNS1-215ENST00000628018 ITSN1Q15811 1721 aa33.76■■■□□ 2.99
CAPNS1-215ENST00000628018 NSD2O96028 1365 aa33.75■■■□□ 2.99
CAPNS1-215ENST00000628018 RBM33Q96EV2 1170 aaKnown RBP33.75■■■□□ 2.99
CAPNS1-215ENST00000628018 AKAP12Q02952 1782 aa33.75■■■□□ 2.99
CAPNS1-215ENST00000628018 PLEKHG3A1L390 1219 aa33.74■■■□□ 2.99
CAPNS1-215ENST00000628018 NUTM2FA1L443 756 aa33.74■■■□□ 2.99
CAPNS1-215ENST00000628018 PROSER2Q86WR7 435 aaPredicted RBP33.74■■■□□ 2.99
CAPNS1-215ENST00000628018 MON2Q7Z3U7 1717 aa33.72■■■□□ 2.99
CAPNS1-215ENST00000628018 RGPD8O14715 1765 aaPredicted RBP33.72■■■□□ 2.99
CAPNS1-215ENST00000628018 PPP2R1AP30153 589 aa33.7■■■□□ 2.99
CAPNS1-215ENST00000628018 ZNF692Q9BU19 519 aaPredicted RBP33.69■■■□□ 2.98
CAPNS1-215ENST00000628018 EDC4Q6P2E9 1401 aaKnown RBP33.69■■■□□ 2.98
CAPNS1-215ENST00000628018 NCOA3Q9Y6Q9 1424 aa33.66■■■□□ 2.98
CAPNS1-215ENST00000628018 ANKRD26Q9UPS8 1709 aa33.66■■■□□ 2.98
CAPNS1-215ENST00000628018 KIF20BQ96Q89 1820 aa33.66■■■□□ 2.98
CAPNS1-215ENST00000628018 ACEP12821 1306 aa33.65■■■□□ 2.98
CAPNS1-215ENST00000628018 MORC1Q86VD1 984 aa33.65■■■□□ 2.98
CAPNS1-215ENST00000628018 FYB1O15117 783 aa33.64■■■□□ 2.98
CAPNS1-215ENST00000628018 C14orf37Q86TY3 774 aa33.64■■■□□ 2.98
CAPNS1-215ENST00000628018 POLR3AO14802 1390 aaPredicted RBP33.62■■■□□ 2.97
CAPNS1-215ENST00000628018 TMEM94Q12767 1356 aa33.62■■■□□ 2.97
CAPNS1-215ENST00000628018 NRKQ7Z2Y5 1582 aa33.61■■■□□ 2.97
CAPNS1-215ENST00000628018 PNISRQ8TF01 805 aaKnown RBP33.61■■■□□ 2.97
CAPNS1-215ENST00000628018 DMRT2Q9Y5R5 561 aa33.6■■■□□ 2.97
CAPNS1-215ENST00000628018 FAM9BQ8IZU0 186 aa33.59■■■□□ 2.97
CAPNS1-215ENST00000628018 GGNBP2Q9H3C7 697 aa33.59■■■□□ 2.97
CAPNS1-215ENST00000628018 C19orf44Q9H6X5 657 aa33.59■■■□□ 2.97
CAPNS1-215ENST00000628018 USP6P35125 1406 aa33.58■■■□□ 2.97
CAPNS1-215ENST00000628018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.58■■■□□ 2.97
CAPNS1-215ENST00000628018 PMFBP1Q8TBY8 1022 aa33.58■■■□□ 2.97
CAPNS1-215ENST00000628018 DCCP43146 1447 aa33.54■■■□□ 2.96
CAPNS1-215ENST00000628018 SSH2Q76I76 1423 aa33.54■■■□□ 2.96
CAPNS1-215ENST00000628018 ZNF335Q9H4Z2 1342 aaPredicted RBP33.54■■■□□ 2.96
CAPNS1-215ENST00000628018 NGDNQ8NEJ9 315 aaKnown RBP33.53■■■□□ 2.96
CAPNS1-215ENST00000628018 XIRP1Q702N8 1843 aaKnown RBP33.53■■■□□ 2.96
CAPNS1-215ENST00000628018 TTC21BQ7Z4L5 1316 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms