RNA–Protein interactions for RNA: ENST00000627784.2

TCF4-261, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-261ENST00000627784 PRAG1Q86YV5 1406 aa25.63■■□□□ 1.69
TCF4-261ENST00000627784 BCL9LQ86UU0 1499 aa25.62■■□□□ 1.69
TCF4-261ENST00000627784 COL22A1Q8NFW1 1626 aaPredicted RBP25.62■■□□□ 1.69
TCF4-261ENST00000627784 MYOM2P54296 1465 aa25.61■■□□□ 1.69
TCF4-261ENST00000627784 HFM1A2PYH4 1435 aa25.61■■□□□ 1.69
TCF4-261ENST00000627784 FOXO3O43524 673 aa25.6■■□□□ 1.69
TCF4-261ENST00000627784 RPGRIP1LQ68CZ1 1315 aa25.59■■□□□ 1.69
TCF4-261ENST00000627784 PXDNQ92626 1479 aa25.59■■□□□ 1.69
TCF4-261ENST00000627784 NPHP3Q7Z494 1330 aa25.58■■□□□ 1.69
TCF4-261ENST00000627784 NUTM2FA1L443 756 aa25.57■■□□□ 1.68
TCF4-261ENST00000627784 ZRANB1Q9UGI0 708 aa25.57■■□□□ 1.68
TCF4-261ENST00000627784 WAPLQ7Z5K2 1190 aa25.55■■□□□ 1.68
TCF4-261ENST00000627784 GJD4Q96KN9 370 aaPredicted RBP25.55■■□□□ 1.68
TCF4-261ENST00000627784 FOXD1Q16676 465 aa25.53■■□□□ 1.68
TCF4-261ENST00000627784 SLC4A1APQ9BWU0 796 aaKnown RBP25.53■■□□□ 1.68
TCF4-261ENST00000627784 STK26Q9P289 416 aa25.53■■□□□ 1.68
TCF4-261ENST00000627784 ADGRF5Q8IZF2 1346 aa25.53■■□□□ 1.68
TCF4-261ENST00000627784 PPLO60437 1756 aa25.53■■□□□ 1.68
TCF4-261ENST00000627784 RRBP1Q9P2E9 1410 aaKnown RBP25.52■■□□□ 1.68
TCF4-261ENST00000627784 CDC42BPGQ6DT37 1551 aa25.52■■□□□ 1.68
TCF4-261ENST00000627784 PLEKHH1Q9ULM0 1364 aa25.49■■□□□ 1.67
TCF4-261ENST00000627784 CCDC125Q86Z20 511 aa25.49■■□□□ 1.67
TCF4-261ENST00000627784 MARF1Q9Y4F3 1742 aaKnown RBP25.49■■□□□ 1.67
TCF4-261ENST00000627784 TMEM132EQ6IEE7 984 aa25.47■■□□□ 1.67
TCF4-261ENST00000627784 RGL3Q3MIN7 710 aa25.46■■□□□ 1.67
TCF4-261ENST00000627784 UNC5CLQ8IV45 518 aa25.46■■□□□ 1.67
TCF4-261ENST00000627784 GLI3P10071 1580 aa25.44■■□□□ 1.66
TCF4-261ENST00000627784 SLIT2O94813 1529 aa25.44■■□□□ 1.66
TCF4-261ENST00000627784 RALGAPBQ86X10 1494 aa25.44■■□□□ 1.66
TCF4-261ENST00000627784 LRPPRCP42704 1394 aaKnown RBP25.44■■□□□ 1.66
TCF4-261ENST00000627784 SPATA31A3Q5VYP0 1347 aa25.43■■□□□ 1.66
TCF4-261ENST00000627784 TECPR2O15040 1411 aa25.43■■□□□ 1.66
TCF4-261ENST00000627784 DEFB132Q7Z7B7 95 aa25.42■■□□□ 1.66
TCF4-261ENST00000627784 KRT28Q7Z3Y7 464 aa25.4■■□□□ 1.66
TCF4-261ENST00000627784 ABCC11Q96J66 1382 aa25.4■■□□□ 1.66
TCF4-261ENST00000627784 CABLES1Q8TDN4 633 aa25.39■■□□□ 1.66
TCF4-261ENST00000627784 BLMP54132 1417 aaPredicted RBP25.38■■□□□ 1.65
TCF4-261ENST00000627784 SPATA31E1Q6ZUB1 1445 aa25.38■■□□□ 1.65
TCF4-261ENST00000627784 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.38■■□□□ 1.65
TCF4-261ENST00000627784 PLEKHG5O94827 1062 aa25.38■■□□□ 1.65
TCF4-261ENST00000627784 SEPT12Q8IYM1 358 aa25.36■■□□□ 1.65
TCF4-261ENST00000627784 BRWD3Q6RI45 1802 aa25.35■■□□□ 1.65
TCF4-261ENST00000627784 FMN2Q9NZ56 1722 aa25.34■■□□□ 1.65
TCF4-261ENST00000627784 CCDC144AA2RUR9 1427 aa25.34■■□□□ 1.65
TCF4-261ENST00000627784 USP32Q8NFA0 1604 aa25.34■■□□□ 1.65
TCF4-261ENST00000627784 ANKRD30BQ9BXX2 1392 aa25.33■■□□□ 1.65
TCF4-261ENST00000627784 YTHDC2Q9H6S0 1430 aaKnown RBP25.33■■□□□ 1.65
TCF4-261ENST00000627784 PIK3C2GO75747 1445 aa25.32■■□□□ 1.64
TCF4-261ENST00000627784 VPS72Q15906 364 aa25.31■■□□□ 1.64
TCF4-261ENST00000627784 PHF8Q9UPP1 1060 aa25.31■■□□□ 1.64
TCF4-261ENST00000627784 KNDC1Q76NI1 1749 aa25.31■■□□□ 1.64
TCF4-261ENST00000627784 IFT172Q9UG01 1749 aa25.31■■□□□ 1.64
TCF4-261ENST00000627784 TNS3Q68CZ2 1445 aa25.29■■□□□ 1.64
TCF4-261ENST00000627784 RGPD8O14715 1765 aaPredicted RBP25.29■■□□□ 1.64
TCF4-261ENST00000627784 ONECUT3O60422 494 aaPredicted RBP25.29■■□□□ 1.64
TCF4-261ENST00000627784 HAP1P54257 671 aaPredicted RBP25.29■■□□□ 1.64
TCF4-261ENST00000627784 KIF1AQ12756 1690 aa25.29■■□□□ 1.64
TCF4-261ENST00000627784 MPHOSPH9Q99550 1183 aa25.28■■□□□ 1.64
TCF4-261ENST00000627784 LMOD2Q6P5Q4 547 aa25.27■■□□□ 1.64
TCF4-261ENST00000627784 CCDC9Q9Y3X0 531 aaKnown RBP25.27■■□□□ 1.64
TCF4-261ENST00000627784 FAM83GA6ND36 823 aa25.26■■□□□ 1.63
TCF4-261ENST00000627784 PSME1Q06323 249 aa25.26■■□□□ 1.63
TCF4-261ENST00000627784 SF3B2Q13435 895 aaKnown RBP25.26■■□□□ 1.63
TCF4-261ENST00000627784 SAFB2Q14151 953 aaKnown RBP eCLIP25.26■■□□□ 1.63
TCF4-261ENST00000627784 KRT27Q7Z3Y8 459 aa25.26■■□□□ 1.63
TCF4-261ENST00000627784 SIRT1Q96EB6 747 aa25.26■■□□□ 1.63
TCF4-261ENST00000627784 CFAP70Q5T0N1 1121 aa25.25■■□□□ 1.63
TCF4-261ENST00000627784 C14orf93Q9H972 538 aaKnown RBP25.25■■□□□ 1.63
TCF4-261ENST00000627784 PLCH1Q4KWH8 1693 aa25.23■■□□□ 1.63
TCF4-261ENST00000627784 NRXN1Q9ULB1 1477 aa25.22■■□□□ 1.63
TCF4-261ENST00000627784 SBNO1A3KN83 1393 aa25.22■■□□□ 1.63
TCF4-261ENST00000627784 PMFBP1Q8TBY8 1022 aa25.22■■□□□ 1.63
TCF4-261ENST00000627784 PSDA5PKW4 1024 aaPredicted RBP25.21■■□□□ 1.63
TCF4-261ENST00000627784 PRAM1Q96QH2 718 aa25.21■■□□□ 1.63
TCF4-261ENST00000627784 ABCA3Q99758 1704 aa25.19■■□□□ 1.62
TCF4-261ENST00000627784 NWD2Q9ULI1 1742 aa25.19■■□□□ 1.62
TCF4-261ENST00000627784 FAM98CQ17RN3 349 aaKnown RBP25.18■■□□□ 1.62
TCF4-261ENST00000627784 A0A0G2JS52 829 aa25.17■■□□□ 1.62
TCF4-261ENST00000627784 MYT1Q01538 1121 aa25.17■■□□□ 1.62
TCF4-261ENST00000627784 ARHGEF10O15013 1369 aa25.17■■□□□ 1.62
TCF4-261ENST00000627784 DHX57Q6P158 1386 aaKnown RBP25.17■■□□□ 1.62
TCF4-261ENST00000627784 FAM182BQ5T319 152 aa25.16■■□□□ 1.62
TCF4-261ENST00000627784 BTG4Q9NY30 223 aa25.16■■□□□ 1.62
TCF4-261ENST00000627784 LRP5O75197 1615 aa25.13■■□□□ 1.61
TCF4-261ENST00000627784 HRCP23327 699 aa25.13■■□□□ 1.61
TCF4-261ENST00000627784 BAG6P46379 1132 aa25.12■■□□□ 1.61
TCF4-261ENST00000627784 EN1Q05925 392 aaPredicted RBP25.12■■□□□ 1.61
TCF4-261ENST00000627784 HIRIP3Q9BW71 556 aaPredicted RBP25.12■■□□□ 1.61
TCF4-261ENST00000627784 POGKQ9P215 609 aa25.12■■□□□ 1.61
TCF4-261ENST00000627784 NRAPQ86VF7 1730 aa25.12■■□□□ 1.61
TCF4-261ENST00000627784 PRR36Q9H6K5 1346 aa25.1■■□□□ 1.61
TCF4-261ENST00000627784 ANKARQ7Z5J8 1434 aa25.08■■□□□ 1.61
TCF4-261ENST00000627784 TRPM3Q9HCF6 1732 aaPredicted RBP25.08■■□□□ 1.61
TCF4-261ENST00000627784 TRAK1Q9UPV9 953 aa25.06■■□□□ 1.6
TCF4-261ENST00000627784 SPATA31A5Q5VU36 1347 aa25.06■■□□□ 1.6
TCF4-261ENST00000627784 SPATA31A7Q8IWB4 1347 aa25.06■■□□□ 1.6
TCF4-261ENST00000627784 DLC1Q96QB1 1528 aa25.06■■□□□ 1.6
TCF4-261ENST00000627784 MINK1Q8N4C8 1332 aaPredicted RBP25.05■■□□□ 1.6
TCF4-261ENST00000627784 ACIN1Q9UKV3 1341 aaKnown RBP25.05■■□□□ 1.6
TCF4-261ENST00000627784 R3HDM1Q15032 1099 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms