RNA–Protein interactions for RNA: ENST00000627740.1

APLF-207, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,180 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-207ENST00000627740 XIRP1Q702N8 1843 aaKnown RBP13.88□□□□□ -0.19
APLF-207ENST00000627740 NCOA3Q9Y6Q9 1424 aa13.88□□□□□ -0.19
APLF-207ENST00000627740 HIRIP3Q9BW71 556 aaPredicted RBP13.88□□□□□ -0.19
APLF-207ENST00000627740 TESK2Q96S53 571 aa13.87□□□□□ -0.19
APLF-207ENST00000627740 LRRC7Q96NW7 1537 aa13.87□□□□□ -0.19
APLF-207ENST00000627740 LTBP4Q8N2S1 1624 aa13.86□□□□□ -0.19
APLF-207ENST00000627740 MINK1Q8N4C8 1332 aaPredicted RBP13.86□□□□□ -0.19
APLF-207ENST00000627740 TMF1P82094 1093 aa13.86□□□□□ -0.19
APLF-207ENST00000627740 ADGRL3Q9HAR2 1447 aa13.86□□□□□ -0.19
APLF-207ENST00000627740 TMEM94Q12767 1356 aa13.86□□□□□ -0.19
APLF-207ENST00000627740 C14orf37Q86TY3 774 aa13.85□□□□□ -0.19
APLF-207ENST00000627740 EVC2Q86UK5 1308 aa13.84□□□□□ -0.19
APLF-207ENST00000627740 CDC42BPGQ6DT37 1551 aa13.84□□□□□ -0.19
APLF-207ENST00000627740 TULP4Q9NRJ4 1543 aa13.84□□□□□ -0.19
APLF-207ENST00000627740 CDCA8Q53HL2 280 aa13.83□□□□□ -0.2
APLF-207ENST00000627740 RBM33Q96EV2 1170 aaKnown RBP13.83□□□□□ -0.2
APLF-207ENST00000627740 DISP3Q9P2K9 1392 aa13.82□□□□□ -0.2
APLF-207ENST00000627740 FMN2Q9NZ56 1722 aa13.82□□□□□ -0.2
APLF-207ENST00000627740 WASLO00401 505 aaPredicted RBP13.82□□□□□ -0.2
APLF-207ENST00000627740 C19orf44Q9H6X5 657 aa13.82□□□□□ -0.2
APLF-207ENST00000627740 DCCP43146 1447 aa13.82□□□□□ -0.2
APLF-207ENST00000627740 MSH6P52701 1360 aa13.81□□□□□ -0.2
APLF-207ENST00000627740 ZNF316A6NFI3 1004 aaPredicted RBP13.81□□□□□ -0.2
APLF-207ENST00000627740 CDK19Q9BWU1 502 aa13.8□□□□□ -0.2
APLF-207ENST00000627740 ITSN1Q15811 1721 aa13.8□□□□□ -0.2
APLF-207ENST00000627740 SRPK2P78362 688 aaKnown RBP13.79□□□□□ -0.2
APLF-207ENST00000627740 PUS7Q96PZ0 661 aaKnown RBP13.79□□□□□ -0.2
APLF-207ENST00000627740 ATF3P18847 181 aa13.78□□□□□ -0.2
APLF-207ENST00000627740 RGPD8O14715 1765 aaPredicted RBP13.78□□□□□ -0.2
APLF-207ENST00000627740 C11orf95C9JLR9 678 aaPredicted RBP13.78□□□□□ -0.2
APLF-207ENST00000627740 KIF7Q2M1P5 1343 aa13.78□□□□□ -0.2
APLF-207ENST00000627740 ATAD2Q6PL18 1390 aa13.77□□□□□ -0.2
APLF-207ENST00000627740 CCDC7Q96M83 1385 aa13.77□□□□□ -0.2
APLF-207ENST00000627740 CADPS2Q86UW7 1296 aa13.77□□□□□ -0.21
APLF-207ENST00000627740 CABP2Q9NPB3 220 aa13.77□□□□□ -0.21
APLF-207ENST00000627740 ANKARQ7Z5J8 1434 aa13.77□□□□□ -0.21
APLF-207ENST00000627740 USP32Q8NFA0 1604 aa13.77□□□□□ -0.21
APLF-207ENST00000627740 TOPAZ1Q8N9V7 1692 aa13.77□□□□□ -0.21
APLF-207ENST00000627740 POLR3GLQ9BT43 218 aa13.76□□□□□ -0.21
APLF-207ENST00000627740 WASHC2AQ641Q2 1341 aa13.76□□□□□ -0.21
APLF-207ENST00000627740 IQSEC2Q5JU85 1478 aa13.76□□□□□ -0.21
APLF-207ENST00000627740 ATP7BP35670 1465 aa13.76□□□□□ -0.21
APLF-207ENST00000627740 MYOM1P52179 1685 aa13.76□□□□□ -0.21
APLF-207ENST00000627740 NUDT16Q96DE0 195 aaKnown RBP13.75□□□□□ -0.21
APLF-207ENST00000627740 NINLQ9Y2I6 1382 aa13.74□□□□□ -0.21
APLF-207ENST00000627740 MST1RQ04912 1400 aa13.73□□□□□ -0.21
APLF-207ENST00000627740 NUTM2FA1L443 756 aa13.73□□□□□ -0.21
APLF-207ENST00000627740 CCDC61Q9Y6R9 512 aa13.73□□□□□ -0.21
APLF-207ENST00000627740 PRR36Q9H6K5 1346 aa13.72□□□□□ -0.21
APLF-207ENST00000627740 PPIP5K1Q6PFW1 1433 aa13.72□□□□□ -0.21
APLF-207ENST00000627740 C1orf167Q5SNV9 1468 aa13.72□□□□□ -0.21
APLF-207ENST00000627740 KIF1AQ12756 1690 aa13.72□□□□□ -0.21
APLF-207ENST00000627740 CERKQ8TCT0 537 aa13.71□□□□□ -0.21
APLF-207ENST00000627740 TMC1Q8TDI8 760 aa13.71□□□□□ -0.21
APLF-207ENST00000627740 AKAP12Q02952 1782 aa13.7□□□□□ -0.22
APLF-207ENST00000627740 ESCO1Q5FWF5 840 aa13.69□□□□□ -0.22
APLF-207ENST00000627740 CABP1Q9NZU7 370 aa13.69□□□□□ -0.22
APLF-207ENST00000627740 SLAIN2Q9P270 581 aa13.69□□□□□ -0.22
APLF-207ENST00000627740 PLEKHG3A1L390 1219 aa13.68□□□□□ -0.22
APLF-207ENST00000627740 SLC12A5Q9H2X9 1139 aa13.68□□□□□ -0.22
APLF-207ENST00000627740 TERF2IPQ9NYB0 399 aa13.68□□□□□ -0.22
APLF-207ENST00000627740 PHF8Q9UPP1 1060 aa13.68□□□□□ -0.22
APLF-207ENST00000627740 ANKRD36BQ8N2N9 1353 aa13.67□□□□□ -0.22
APLF-207ENST00000627740 TOM1O60784 492 aa13.67□□□□□ -0.22
APLF-207ENST00000627740 MON2Q7Z3U7 1717 aa13.67□□□□□ -0.22
APLF-207ENST00000627740 HDGFL2Q7Z4V5 671 aaPredicted RBP13.66□□□□□ -0.22
APLF-207ENST00000627740 CD163L1Q9NR16 1453 aa13.66□□□□□ -0.22
APLF-207ENST00000627740 POLR3AO14802 1390 aaPredicted RBP13.65□□□□□ -0.22
APLF-207ENST00000627740 ROBO1Q9Y6N7 1651 aa13.65□□□□□ -0.22
APLF-207ENST00000627740 DDX10Q13206 875 aaKnown RBP13.65□□□□□ -0.22
APLF-207ENST00000627740 NGDNQ8NEJ9 315 aaKnown RBP13.65□□□□□ -0.22
APLF-207ENST00000627740 PMFBP1Q8TBY8 1022 aa13.65□□□□□ -0.22
APLF-207ENST00000627740 ORAI2Q96SN7 254 aa13.65□□□□□ -0.22
APLF-207ENST00000627740 ACEP12821 1306 aa13.65□□□□□ -0.22
APLF-207ENST00000627740 CPSF1Q10570 1443 aaKnown RBP13.65□□□□□ -0.22
APLF-207ENST00000627740 ZNF692Q9BU19 519 aaPredicted RBP13.65□□□□□ -0.22
APLF-207ENST00000627740 PANK3Q9H999 370 aa13.65□□□□□ -0.22
APLF-207ENST00000627740 A0A1W2PP64 1363 aa13.64□□□□□ -0.23
APLF-207ENST00000627740 UBAP1LF5GYI3 381 aa13.64□□□□□ -0.23
APLF-207ENST00000627740 BRINP3Q76B58 766 aa13.64□□□□□ -0.23
APLF-207ENST00000627740 KTN1Q86UP2 1357 aaKnown RBP13.63□□□□□ -0.23
APLF-207ENST00000627740 NHSL1Q5SYE7 1610 aa13.63□□□□□ -0.23
APLF-207ENST00000627740 NRKQ7Z2Y5 1582 aa13.62□□□□□ -0.23
APLF-207ENST00000627740 USP6P35125 1406 aa13.62□□□□□ -0.23
APLF-207ENST00000627740 NPHP3Q7Z494 1330 aa13.61□□□□□ -0.23
APLF-207ENST00000627740 BRD4O60885 1362 aaPredicted RBP13.61□□□□□ -0.23
APLF-207ENST00000627740 EDC4Q6P2E9 1401 aaKnown RBP13.61□□□□□ -0.23
APLF-207ENST00000627740 FOXO3O43524 673 aa13.61□□□□□ -0.23
APLF-207ENST00000627740 PSME1Q06323 249 aa13.61□□□□□ -0.23
APLF-207ENST00000627740 NSD3Q9BZ95 1437 aa13.61□□□□□ -0.23
APLF-207ENST00000627740 KIF20BQ96Q89 1820 aa13.61□□□□□ -0.23
APLF-207ENST00000627740 KNSTRNQ9Y448 316 aa13.59□□□□□ -0.23
APLF-207ENST00000627740 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
APLF-207ENST00000627740 AHDC1Q5TGY3 1603 aaPredicted RBP13.59□□□□□ -0.23
APLF-207ENST00000627740 PIP4K2BP78356 416 aa13.59□□□□□ -0.23
APLF-207ENST00000627740 CARD14Q9BXL6 1004 aa13.59□□□□□ -0.23
APLF-207ENST00000627740 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.23
APLF-207ENST00000627740 PER1O15534 1290 aaPredicted RBP13.58□□□□□ -0.24
APLF-207ENST00000627740 KRT28Q7Z3Y7 464 aa13.58□□□□□ -0.24
APLF-207ENST00000627740 PXDNQ92626 1479 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms