RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 ABCC11Q96J66 1382 aa37.78■■■■□ 3.64
TCF4-259ENST00000627568 TMEM132EQ6IEE7 984 aa37.77■■■■□ 3.64
TCF4-259ENST00000627568 ORAI2Q96SN7 254 aa37.76■■■■□ 3.64
TCF4-259ENST00000627568 ZNF772Q68DY9 489 aaPredicted RBP37.75■■■■□ 3.63
TCF4-259ENST00000627568 YTHDC2Q9H6S0 1430 aaKnown RBP37.74■■■■□ 3.63
TCF4-259ENST00000627568 NRXN1Q9ULB1 1477 aa37.74■■■■□ 3.63
TCF4-259ENST00000627568 PNPLA6Q8IY17 1366 aa37.73■■■■□ 3.63
TCF4-259ENST00000627568 WAPLQ7Z5K2 1190 aa37.72■■■■□ 3.63
TCF4-259ENST00000627568 C14orf93Q9H972 538 aaKnown RBP37.7■■■■□ 3.63
TCF4-259ENST00000627568 HRCP23327 699 aa37.68■■■■□ 3.62
TCF4-259ENST00000627568 SOS2Q07890 1332 aaPredicted RBP37.66■■■■□ 3.62
TCF4-259ENST00000627568 ESCO1Q5FWF5 840 aa37.66■■■■□ 3.62
TCF4-259ENST00000627568 DHX57Q6P158 1386 aaKnown RBP37.66■■■■□ 3.62
TCF4-259ENST00000627568 PLEKHH1Q9ULM0 1364 aa37.66■■■■□ 3.62
TCF4-259ENST00000627568 CFAP70Q5T0N1 1121 aa37.64■■■■□ 3.62
TCF4-259ENST00000627568 NPHP3Q7Z494 1330 aa37.62■■■■□ 3.61
TCF4-259ENST00000627568 SIRT1Q96EB6 747 aa37.6■■■■□ 3.61
TCF4-259ENST00000627568 AFF2P51816 1311 aa37.6■■■■□ 3.61
TCF4-259ENST00000627568 FMN2Q9NZ56 1722 aa37.59■■■■□ 3.61
TCF4-259ENST00000627568 NUTM2FA1L443 756 aa37.58■■■■□ 3.61
TCF4-259ENST00000627568 C8orf37Q96NL8 207 aa37.57■■■■□ 3.6
TCF4-259ENST00000627568 PXDNQ92626 1479 aa37.52■■■■□ 3.6
TCF4-259ENST00000627568 FOXO3O43524 673 aa37.52■■■■□ 3.6
TCF4-259ENST00000627568 RXRBP28702 533 aa37.52■■■■□ 3.6
TCF4-259ENST00000627568 KIF1AQ12756 1690 aa37.52■■■■□ 3.6
TCF4-259ENST00000627568 COL22A1Q8NFW1 1626 aaPredicted RBP37.51■■■■□ 3.6
TCF4-259ENST00000627568 ADAMTS2O95450 1211 aa37.51■■■■□ 3.6
TCF4-259ENST00000627568 DCAF11Q8TEB1 546 aa37.51■■■■□ 3.6
TCF4-259ENST00000627568 DLC1Q96QB1 1528 aa37.51■■■■□ 3.59
TCF4-259ENST00000627568 KDM2AQ9Y2K7 1162 aa37.5■■■■□ 3.59
TCF4-259ENST00000627568 STAC3Q96MF2 364 aa37.49■■■■□ 3.59
TCF4-259ENST00000627568 PRAM1Q96QH2 718 aa37.49■■■■□ 3.59
TCF4-259ENST00000627568 ADGRB1O14514 1584 aa37.47■■■■□ 3.59
TCF4-259ENST00000627568 XPCQ01831 940 aaPredicted RBP37.47■■■■□ 3.59
TCF4-259ENST00000627568 SAFB2Q14151 953 aaKnown RBP eCLIP37.47■■■■□ 3.59
TCF4-259ENST00000627568 POGKQ9P215 609 aa37.47■■■■□ 3.59
TCF4-259ENST00000627568 NGLY1Q96IV0 654 aa37.46■■■■□ 3.59
TCF4-259ENST00000627568 CDK12Q9NYV4 1490 aaPredicted RBP37.43■■■■□ 3.58
TCF4-259ENST00000627568 RGPD8O14715 1765 aaPredicted RBP37.42■■■■□ 3.58
TCF4-259ENST00000627568 QTRT2Q9H974 415 aaKnown RBP37.39■■■■□ 3.58
TCF4-259ENST00000627568 TRAK1Q9UPV9 953 aa37.39■■■■□ 3.58
TCF4-259ENST00000627568 ADGRB2O60241 1585 aa37.38■■■■□ 3.57
TCF4-259ENST00000627568 PHF8Q9UPP1 1060 aa37.36■■■■□ 3.57
TCF4-259ENST00000627568 RBM6P78332 1123 aaKnown RBP37.35■■■■□ 3.57
TCF4-259ENST00000627568 USP21Q9UK80 565 aa37.33■■■■□ 3.57
TCF4-259ENST00000627568 ANKARQ7Z5J8 1434 aa37.33■■■■□ 3.57
TCF4-259ENST00000627568 MARF1Q9Y4F3 1742 aaKnown RBP37.33■■■■□ 3.57
TCF4-259ENST00000627568 KRT28Q7Z3Y7 464 aa37.32■■■■□ 3.56
TCF4-259ENST00000627568 SPATA31A3Q5VYP0 1347 aa37.32■■■■□ 3.56
TCF4-259ENST00000627568 EIF3AQ14152 1382 aaKnown RBP37.29■■■■□ 3.56
TCF4-259ENST00000627568 PSME1Q06323 249 aa37.29■■■■□ 3.56
TCF4-259ENST00000627568 FNBP4Q8N3X1 1017 aaPredicted RBP37.28■■■■□ 3.56
TCF4-259ENST00000627568 MINK1Q8N4C8 1332 aaPredicted RBP37.28■■■■□ 3.56
TCF4-259ENST00000627568 RGS12O14924 1447 aa37.27■■■■□ 3.56
TCF4-259ENST00000627568 HIRIP3Q9BW71 556 aaPredicted RBP37.27■■■■□ 3.56
TCF4-259ENST00000627568 TRPC5Q9UL62 973 aaPredicted RBP37.27■■■■□ 3.56
TCF4-259ENST00000627568 USP32Q8NFA0 1604 aa37.27■■■■□ 3.56
TCF4-259ENST00000627568 TNS3Q68CZ2 1445 aa37.26■■■■□ 3.55
TCF4-259ENST00000627568 ARHGEF28Q8N1W1 1705 aaKnown RBP37.24■■■■□ 3.55
TCF4-259ENST00000627568 TULP4Q9NRJ4 1543 aa37.21■■■■□ 3.55
TCF4-259ENST00000627568 UPF1Q92900 1129 aaKnown RBP eCLIP37.21■■■■□ 3.55
TCF4-259ENST00000627568 SBNO1A3KN83 1393 aa37.2■■■■□ 3.55
TCF4-259ENST00000627568 KIAA1210Q9ULL0 1709 aa37.2■■■■□ 3.55
TCF4-259ENST00000627568 PMFBP1Q8TBY8 1022 aa37.2■■■■□ 3.55
TCF4-259ENST00000627568 HAP1P54257 671 aaPredicted RBP37.19■■■■□ 3.54
TCF4-259ENST00000627568 ATRNO75882 1429 aa37.19■■■■□ 3.54
TCF4-259ENST00000627568 ARHGEF10O15013 1369 aa37.17■■■■□ 3.54
TCF4-259ENST00000627568 WASLO00401 505 aaPredicted RBP37.17■■■■□ 3.54
TCF4-259ENST00000627568 LMOD2Q6P5Q4 547 aa37.16■■■■□ 3.54
TCF4-259ENST00000627568 BCL9LQ86UU0 1499 aa37.14■■■■□ 3.54
TCF4-259ENST00000627568 GPRASP1Q5JY77 1395 aa37.13■■■■□ 3.53
TCF4-259ENST00000627568 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.13■■■■□ 3.53
TCF4-259ENST00000627568 PRR36Q9H6K5 1346 aa37.12■■■■□ 3.53
TCF4-259ENST00000627568 ITSN1Q15811 1721 aa37.1■■■■□ 3.53
TCF4-259ENST00000627568 ABCA3Q99758 1704 aa37.09■■■■□ 3.53
TCF4-259ENST00000627568 PLEKHG5O94827 1062 aa37.08■■■■□ 3.53
TCF4-259ENST00000627568 TRPM3Q9HCF6 1732 aaPredicted RBP37.07■■■■□ 3.53
TCF4-259ENST00000627568 SLIT2O94813 1529 aa37.07■■■■□ 3.53
TCF4-259ENST00000627568 CABLES1Q8TDN4 633 aa37.07■■■■□ 3.52
TCF4-259ENST00000627568 UNC5CLQ8IV45 518 aa37.05■■■■□ 3.52
TCF4-259ENST00000627568 NGDNQ8NEJ9 315 aaKnown RBP37.05■■■■□ 3.52
TCF4-259ENST00000627568 ATP7BP35670 1465 aa37.03■■■■□ 3.52
TCF4-259ENST00000627568 ATAD2Q6PL18 1390 aa37.03■■■■□ 3.52
TCF4-259ENST00000627568 GJD4Q96KN9 370 aaPredicted RBP37.02■■■■□ 3.52
TCF4-259ENST00000627568 ALS2Q96Q42 1657 aa37.02■■■■□ 3.52
TCF4-259ENST00000627568 NBPF1Q3BBV0 1214 aa37■■■■□ 3.51
TCF4-259ENST00000627568 NUDT16Q96DE0 195 aaKnown RBP37■■■■□ 3.51
TCF4-259ENST00000627568 PLCH1Q4KWH8 1693 aa36.99■■■■□ 3.51
TCF4-259ENST00000627568 NWD2Q9ULI1 1742 aa36.99■■■■□ 3.51
TCF4-259ENST00000627568 CDK19Q9BWU1 502 aa36.97■■■■□ 3.51
TCF4-259ENST00000627568 RALGAPBQ86X10 1494 aa36.95■■■■□ 3.51
TCF4-259ENST00000627568 PAK3O75914 559 aaPredicted RBP36.95■■■■□ 3.51
TCF4-259ENST00000627568 L3MBTL2Q969R5 705 aa36.94■■■■□ 3.5
TCF4-259ENST00000627568 GLI3P10071 1580 aa36.93■■■■□ 3.5
TCF4-259ENST00000627568 TOPAZ1Q8N9V7 1692 aa36.93■■■■□ 3.5
TCF4-259ENST00000627568 CENPJQ9HC77 1338 aaPredicted RBP36.9■■■■□ 3.5
TCF4-259ENST00000627568 SIN3AQ96ST3 1273 aa36.9■■■■□ 3.5
TCF4-259ENST00000627568 VPS72Q15906 364 aa36.88■■■■□ 3.49
TCF4-259ENST00000627568 CCDC9Q9Y3X0 531 aaKnown RBP36.88■■■■□ 3.49
TCF4-259ENST00000627568 CCDC61Q9Y6R9 512 aa36.88■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms