RNA–Protein interactions for RNA: ENST00000627179.1

LINC01338-201, Transcript of long intergenic non-protein coding RNA 1338, humanhuman

TSL 3 BASIC

Gene LINC01338, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01338-201ENST00000627179 USB1Q9BQ65 265 aaKnown RBP10.83□□□□□ -0.68
LINC01338-201ENST00000627179 MMP16P51512 607 aa10.82□□□□□ -0.68
LINC01338-201ENST00000627179 AMHR2Q16671 573 aa10.82□□□□□ -0.68
LINC01338-201ENST00000627179 NUTM1Q86Y26 1132 aa10.82□□□□□ -0.68
LINC01338-201ENST00000627179 REPIN1Q9BWE0 567 aaKnown RBP10.82□□□□□ -0.68
LINC01338-201ENST00000627179 SSTR3P32745 418 aaPredicted RBP10.81□□□□□ -0.68
LINC01338-201ENST00000627179 PRDM9Q9NQV7 894 aa10.81□□□□□ -0.68
LINC01338-201ENST00000627179 DGAT1O75907 488 aa10.8□□□□□ -0.68
LINC01338-201ENST00000627179 ZBTB24O43167 697 aaPredicted RBP10.78□□□□□ -0.68
LINC01338-201ENST00000627179 HLA-CQ95604 372 aa10.78□□□□□ -0.68
LINC01338-201ENST00000627179 DXOO77932 396 aaKnown RBP10.77□□□□□ -0.69
LINC01338-201ENST00000627179 TTLL12Q14166 644 aaPredicted RBP10.77□□□□□ -0.69
LINC01338-201ENST00000627179 PKDCCQ504Y2 493 aa10.77□□□□□ -0.69
LINC01338-201ENST00000627179 TNFRSF10AO00220 468 aa10.76□□□□□ -0.69
LINC01338-201ENST00000627179 PKD2L1Q9P0L9 805 aa10.76□□□□□ -0.69
LINC01338-201ENST00000627179 FOXC1Q12948 553 aa10.74□□□□□ -0.69
LINC01338-201ENST00000627179 GIGYF2Q6Y7W6 1299 aaKnown RBP10.74□□□□□ -0.69
LINC01338-201ENST00000627179 AK7Q96M32 723 aa10.74□□□□□ -0.69
LINC01338-201ENST00000627179 FDX1P10109 184 aa10.73□□□□□ -0.69
LINC01338-201ENST00000627179 GUCA2AQ02747 115 aa10.73□□□□□ -0.69
LINC01338-201ENST00000627179 SPIRE2Q8WWL2 714 aa10.73□□□□□ -0.69
LINC01338-201ENST00000627179 FAM187AA6NFU0 413 aa10.72□□□□□ -0.69
LINC01338-201ENST00000627179 TRIM66O15016 1216 aa10.72□□□□□ -0.69
LINC01338-201ENST00000627179 RETREG3Q86VR2 466 aa10.72□□□□□ -0.69
LINC01338-201ENST00000627179 MYT1Q01538 1121 aa10.71□□□□□ -0.69
LINC01338-201ENST00000627179 JUNDP17535 347 aa10.7□□□□□ -0.7
LINC01338-201ENST00000627179 TRIM32Q13049 653 aa10.7□□□□□ -0.7
LINC01338-201ENST00000627179 DIXDC1Q155Q3 683 aa10.7□□□□□ -0.7
LINC01338-201ENST00000627179 SYMPKQ92797 1274 aaKnown RBP10.7□□□□□ -0.7
LINC01338-201ENST00000627179 BEGAINQ9BUH8 593 aa10.69□□□□□ -0.7
LINC01338-201ENST00000627179 TOR4AQ9NXH8 423 aa10.69□□□□□ -0.7
LINC01338-201ENST00000627179 PCDHGC3Q9UN70 934 aa10.69□□□□□ -0.7
LINC01338-201ENST00000627179 C6orf229H3BNL8 230 aa10.68□□□□□ -0.7
LINC01338-201ENST00000627179 PARP9Q8IXQ6 854 aa10.68□□□□□ -0.7
LINC01338-201ENST00000627179 CYP4X1Q8N118 509 aa10.68□□□□□ -0.7
LINC01338-201ENST00000627179 WNT7AO00755 349 aa10.67□□□□□ -0.7
LINC01338-201ENST00000627179 GJA5P36382 358 aa10.67□□□□□ -0.7
LINC01338-201ENST00000627179 ZNF787Q6DD87 383 aa10.67□□□□□ -0.7
LINC01338-201ENST00000627179 CCDC24Q8N4L8 307 aa10.67□□□□□ -0.7
LINC01338-201ENST00000627179 MOXD2PA6NHM9 499 aa10.66□□□□□ -0.7
LINC01338-201ENST00000627179 NDUFV2P19404 249 aa10.66□□□□□ -0.7
LINC01338-201ENST00000627179 SPDYE5A6NIY4 337 aa10.65□□□□□ -0.7
LINC01338-201ENST00000627179 TBC1D2Q9BYX2 928 aa10.64□□□□□ -0.71
LINC01338-201ENST00000627179 AVPP01185 164 aa10.63□□□□□ -0.71
LINC01338-201ENST00000627179 WNT7BP56706 349 aa10.63□□□□□ -0.71
LINC01338-201ENST00000627179 NUDT12Q9BQG2 462 aa10.63□□□□□ -0.71
LINC01338-201ENST00000627179 MS4A1P11836 297 aa10.62□□□□□ -0.71
LINC01338-201ENST00000627179 MTMR2Q13614 643 aa10.62□□□□□ -0.71
LINC01338-201ENST00000627179 CRIPAKQ8N1N5 446 aa10.62□□□□□ -0.71
LINC01338-201ENST00000627179 SNIP1Q8TAD8 396 aaKnown RBP10.62□□□□□ -0.71
LINC01338-201ENST00000627179 TTC24A2A3L6 582 aaPredicted RBP10.61□□□□□ -0.71
LINC01338-201ENST00000627179 PDE4DQ08499 809 aa10.61□□□□□ -0.71
LINC01338-201ENST00000627179 DESI1Q6ICB0 168 aa10.61□□□□□ -0.71
LINC01338-201ENST00000627179 AAASQ9NRG9 546 aa10.61□□□□□ -0.71
LINC01338-201ENST00000627179 PTPRNQ16849 979 aa10.6□□□□□ -0.71
LINC01338-201ENST00000627179 RSBN1LQ6PCB5 846 aaPredicted RBP10.6□□□□□ -0.71
LINC01338-201ENST00000627179 SPTLC1O15269 473 aa10.59□□□□□ -0.71
LINC01338-201ENST00000627179 CTC1Q2NKJ3 1217 aa10.59□□□□□ -0.71
LINC01338-201ENST00000627179 RC3H1Q5TC82 1133 aaKnown RBP10.59□□□□□ -0.71
LINC01338-201ENST00000627179 PRR7Q8TB68 274 aa10.59□□□□□ -0.71
LINC01338-201ENST00000627179 MRGPRX2Q96LB1 330 aa10.59□□□□□ -0.71
LINC01338-201ENST00000627179 CCNYL3P0C7X3 344 aa10.58□□□□□ -0.72
LINC01338-201ENST00000627179 PTCRAQ6ISU1 281 aaPredicted RBP10.58□□□□□ -0.72
LINC01338-201ENST00000627179 SLC24A3Q9HC58 644 aa10.58□□□□□ -0.72
LINC01338-201ENST00000627179 EVA1BQ9NVM1 165 aa10.58□□□□□ -0.72
LINC01338-201ENST00000627179 SMCPP49901 116 aaPredicted RBP10.57□□□□□ -0.72
LINC01338-201ENST00000627179 SKOR1P84550 965 aa10.57□□□□□ -0.72
LINC01338-201ENST00000627179 SMPD1P17405 629 aa10.56□□□□□ -0.72
LINC01338-201ENST00000627179 RIC3Q7Z5B4 369 aa10.56□□□□□ -0.72
LINC01338-201ENST00000627179 ST8SIA5O15466 376 aa10.55□□□□□ -0.72
LINC01338-201ENST00000627179 PRPF38BQ5VTL8 546 aaKnown RBP10.55□□□□□ -0.72
LINC01338-201ENST00000627179 PCDHB15Q9Y5E8 787 aa10.55□□□□□ -0.72
LINC01338-201ENST00000627179 AXIN1O15169 862 aa10.54□□□□□ -0.72
LINC01338-201ENST00000627179 KCNH2Q12809 1159 aa10.54□□□□□ -0.72
LINC01338-201ENST00000627179 ZBTB3Q9H5J0 574 aa10.54□□□□□ -0.72
LINC01338-201ENST00000627179 TUSC1Q2TAM9 212 aa10.53□□□□□ -0.72
LINC01338-201ENST00000627179 BCANQ96GW7 911 aa10.52□□□□□ -0.73
LINC01338-201ENST00000627179 POTECB2RU33 542 aa10.51□□□□□ -0.73
LINC01338-201ENST00000627179 J3QL48 77 aa10.51□□□□□ -0.73
LINC01338-201ENST00000627179 HRCP23327 699 aa10.51□□□□□ -0.73
LINC01338-201ENST00000627179 LYPD8Q6UX82 237 aa10.51□□□□□ -0.73
LINC01338-201ENST00000627179 UNC93B1Q9H1C4 597 aa10.51□□□□□ -0.73
LINC01338-201ENST00000627179 MYSM1Q5VVJ2 828 aa10.5□□□□□ -0.73
LINC01338-201ENST00000627179 SIAH2O43255 324 aa10.49□□□□□ -0.73
LINC01338-201ENST00000627179 SH3BP2P78314 561 aa10.49□□□□□ -0.73
LINC01338-201ENST00000627179 EHBP1Q8NDI1 1231 aa10.49□□□□□ -0.73
LINC01338-201ENST00000627179 ZNF775Q96BV0 537 aaPredicted RBP10.49□□□□□ -0.73
LINC01338-201ENST00000627179 CFAP99D6REC4 459 aa10.48□□□□□ -0.73
LINC01338-201ENST00000627179 RSPH6AQ9H0K4 717 aa10.48□□□□□ -0.73
LINC01338-201ENST00000627179 BAP1Q92560 729 aa10.47□□□□□ -0.73
LINC01338-201ENST00000627179 LIMD1Q9UGP4 676 aa10.47□□□□□ -0.73
LINC01338-201ENST00000627179 DACH1Q9UI36 760 aa10.47□□□□□ -0.73
LINC01338-201ENST00000627179 ALDH1A1P00352 501 aa10.46□□□□□ -0.73
LINC01338-201ENST00000627179 CABLES1Q8TDN4 633 aa10.46□□□□□ -0.73
LINC01338-201ENST00000627179 SLC24A1O60721 1099 aa10.45□□□□□ -0.74
LINC01338-201ENST00000627179 LILRB3O75022 631 aa10.45□□□□□ -0.74
LINC01338-201ENST00000627179 CTHP32929 405 aa10.45□□□□□ -0.74
LINC01338-201ENST00000627179 CSPP1Q1MSJ5 1256 aa10.45□□□□□ -0.74
LINC01338-201ENST00000627179 HPS1Q92902 700 aa10.45□□□□□ -0.74
LINC01338-201ENST00000627179 NUTM2BA6NNL0 878 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms