RNA–Protein interactions for RNA: ENST00000625980.2

SPTAN1-211, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-211ENST00000625980 CABP2Q9NPB3 220 aa17.72■□□□□ 0.43
SPTAN1-211ENST00000625980 MYOM1P52179 1685 aa17.72■□□□□ 0.43
SPTAN1-211ENST00000625980 PER1O15534 1290 aaPredicted RBP17.72■□□□□ 0.43
SPTAN1-211ENST00000625980 FAM135BQ49AJ0 1406 aa17.72■□□□□ 0.43
SPTAN1-211ENST00000625980 NPHP4O75161 1426 aaPredicted RBP17.71■□□□□ 0.43
SPTAN1-211ENST00000625980 PRKRIP1Q9H875 184 aaPredicted RBP17.71■□□□□ 0.43
SPTAN1-211ENST00000625980 HSPA2P54652 639 aa17.69■□□□□ 0.42
SPTAN1-211ENST00000625980 SRPK2P78362 688 aaKnown RBP17.69■□□□□ 0.42
SPTAN1-211ENST00000625980 PUS7Q96PZ0 661 aaKnown RBP17.69■□□□□ 0.42
SPTAN1-211ENST00000625980 CDK19Q9BWU1 502 aa17.69■□□□□ 0.42
SPTAN1-211ENST00000625980 TMC1Q8TDI8 760 aa17.68■□□□□ 0.42
SPTAN1-211ENST00000625980 SLC12A5Q9H2X9 1139 aa17.68■□□□□ 0.42
SPTAN1-211ENST00000625980 CCER2I3L3R5 266 aa17.67■□□□□ 0.42
SPTAN1-211ENST00000625980 PIK3R4Q99570 1358 aa17.66■□□□□ 0.42
SPTAN1-211ENST00000625980 KCNA6P17658 529 aa17.66■□□□□ 0.42
SPTAN1-211ENST00000625980 XRN1Q8IZH2 1706 aaKnown RBP17.65■□□□□ 0.42
SPTAN1-211ENST00000625980 PTCH1Q13635 1447 aa17.64■□□□□ 0.42
SPTAN1-211ENST00000625980 WASLO00401 505 aaPredicted RBP17.64■□□□□ 0.41
SPTAN1-211ENST00000625980 CARD14Q9BXL6 1004 aa17.64■□□□□ 0.41
SPTAN1-211ENST00000625980 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.64■□□□□ 0.41
SPTAN1-211ENST00000625980 LMTK3Q96Q04 1460 aa17.64■□□□□ 0.41
SPTAN1-211ENST00000625980 KNSTRNQ9Y448 316 aa17.63■□□□□ 0.41
SPTAN1-211ENST00000625980 ATAD2Q6PL18 1390 aa17.62■□□□□ 0.41
SPTAN1-211ENST00000625980 CCDC184Q52MB2 194 aa17.62■□□□□ 0.41
SPTAN1-211ENST00000625980 CC2D1BQ5T0F9 858 aaKnown RBP17.62■□□□□ 0.41
SPTAN1-211ENST00000625980 CHD2O14647 1828 aaKnown RBP17.61■□□□□ 0.41
SPTAN1-211ENST00000625980 KTN1Q86UP2 1357 aaKnown RBP17.6■□□□□ 0.41
SPTAN1-211ENST00000625980 AMER1Q5JTC6 1135 aaPredicted RBP17.6■□□□□ 0.41
SPTAN1-211ENST00000625980 YTHDC1Q96MU7 727 aaKnown RBP17.6■□□□□ 0.41
SPTAN1-211ENST00000625980 CABP1Q9NZU7 370 aa17.58■□□□□ 0.41
SPTAN1-211ENST00000625980 PARD3Q8TEW0 1356 aa17.58■□□□□ 0.4
SPTAN1-211ENST00000625980 ADGRB2O60241 1585 aa17.58■□□□□ 0.4
SPTAN1-211ENST00000625980 RALBP1Q15311 655 aa17.58■□□□□ 0.4
SPTAN1-211ENST00000625980 ANKRD36BQ8N2N9 1353 aa17.57■□□□□ 0.4
SPTAN1-211ENST00000625980 NINLQ9Y2I6 1382 aa17.57■□□□□ 0.4
SPTAN1-211ENST00000625980 NSD3Q9BZ95 1437 aa17.57■□□□□ 0.4
SPTAN1-211ENST00000625980 NUDT16Q96DE0 195 aaKnown RBP17.57■□□□□ 0.4
SPTAN1-211ENST00000625980 RBM33Q96EV2 1170 aaKnown RBP17.57■□□□□ 0.4
SPTAN1-211ENST00000625980 PRR36Q9H6K5 1346 aa17.57■□□□□ 0.4
SPTAN1-211ENST00000625980 CD163L1Q9NR16 1453 aa17.56■□□□□ 0.4
SPTAN1-211ENST00000625980 A0A1W2PP64 1363 aa17.55■□□□□ 0.4
SPTAN1-211ENST00000625980 NUTM2FA1L443 756 aa17.55■□□□□ 0.4
SPTAN1-211ENST00000625980 MYBBP1AQ9BQG0 1328 aaKnown RBP17.54■□□□□ 0.4
SPTAN1-211ENST00000625980 MRS2Q9HD23 443 aa17.53■□□□□ 0.4
SPTAN1-211ENST00000625980 NPC1L1Q9UHC9 1359 aa17.53■□□□□ 0.4
SPTAN1-211ENST00000625980 ATP7BP35670 1465 aa17.53■□□□□ 0.4
SPTAN1-211ENST00000625980 NWD1Q149M9 1564 aa17.53■□□□□ 0.4
SPTAN1-211ENST00000625980 PPIP5K1Q6PFW1 1433 aa17.53■□□□□ 0.4
SPTAN1-211ENST00000625980 TERF2IPQ9NYB0 399 aa17.52■□□□□ 0.4
SPTAN1-211ENST00000625980 CCDC61Q9Y6R9 512 aa17.52■□□□□ 0.4
SPTAN1-211ENST00000625980 STRCQ7RTU9 1775 aa17.52■□□□□ 0.4
SPTAN1-211ENST00000625980 HDGFL2Q7Z4V5 671 aaPredicted RBP17.51■□□□□ 0.39
SPTAN1-211ENST00000625980 PROSER2Q86WR7 435 aaPredicted RBP17.49■□□□□ 0.39
SPTAN1-211ENST00000625980 CGNL1Q0VF96 1302 aa17.48■□□□□ 0.39
SPTAN1-211ENST00000625980 NALCNQ8IZF0 1738 aa17.48■□□□□ 0.39
SPTAN1-211ENST00000625980 USP32Q8NFA0 1604 aa17.48■□□□□ 0.39
SPTAN1-211ENST00000625980 NLRP13Q86W25 1043 aa17.47■□□□□ 0.39
SPTAN1-211ENST00000625980 CPSF1Q10570 1443 aaKnown RBP17.47■□□□□ 0.39
SPTAN1-211ENST00000625980 PPP2R1AP30153 589 aa17.47■□□□□ 0.39
SPTAN1-211ENST00000625980 ADGRL3Q9HAR2 1447 aa17.47■□□□□ 0.39
SPTAN1-211ENST00000625980 BRD4O60885 1362 aaPredicted RBP17.46■□□□□ 0.39
SPTAN1-211ENST00000625980 STRCP1A6NGW2 1772 aa17.46■□□□□ 0.39
SPTAN1-211ENST00000625980 CDC42BPGQ6DT37 1551 aa17.46■□□□□ 0.39
SPTAN1-211ENST00000625980 TOPAZ1Q8N9V7 1692 aa17.46■□□□□ 0.39
SPTAN1-211ENST00000625980 NKTRP30414 1462 aaKnown RBP17.46■□□□□ 0.38
SPTAN1-211ENST00000625980 PLEKHG3A1L390 1219 aa17.45■□□□□ 0.38
SPTAN1-211ENST00000625980 C14orf37Q86TY3 774 aa17.45■□□□□ 0.38
SPTAN1-211ENST00000625980 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
SPTAN1-211ENST00000625980 ACEP12821 1306 aa17.44■□□□□ 0.38
SPTAN1-211ENST00000625980 FMN2Q9NZ56 1722 aa17.44■□□□□ 0.38
SPTAN1-211ENST00000625980 FYB1O15117 783 aa17.44■□□□□ 0.38
SPTAN1-211ENST00000625980 MORC1Q86VD1 984 aa17.44■□□□□ 0.38
SPTAN1-211ENST00000625980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.44■□□□□ 0.38
SPTAN1-211ENST00000625980 PMFBP1Q8TBY8 1022 aa17.44■□□□□ 0.38
SPTAN1-211ENST00000625980 GGNBP2Q9H3C7 697 aa17.44■□□□□ 0.38
SPTAN1-211ENST00000625980 ANKARQ7Z5J8 1434 aa17.43■□□□□ 0.38
SPTAN1-211ENST00000625980 NSD2O96028 1365 aa17.42■□□□□ 0.38
SPTAN1-211ENST00000625980 TMEM94Q12767 1356 aa17.42■□□□□ 0.38
SPTAN1-211ENST00000625980 RGPD8O14715 1765 aaPredicted RBP17.41■□□□□ 0.38
SPTAN1-211ENST00000625980 TNNT2P45379 298 aaPredicted RBP17.41■□□□□ 0.38
SPTAN1-211ENST00000625980 PNISRQ8TF01 805 aaKnown RBP17.41■□□□□ 0.38
SPTAN1-211ENST00000625980 ZNF692Q9BU19 519 aaPredicted RBP17.41■□□□□ 0.38
SPTAN1-211ENST00000625980 EDC4Q6P2E9 1401 aaKnown RBP17.41■□□□□ 0.38
SPTAN1-211ENST00000625980 AKAP12Q02952 1782 aa17.4■□□□□ 0.38
SPTAN1-211ENST00000625980 ZNF335Q9H4Z2 1342 aaPredicted RBP17.4■□□□□ 0.38
SPTAN1-211ENST00000625980 ITSN1Q15811 1721 aa17.39■□□□□ 0.37
SPTAN1-211ENST00000625980 MON2Q7Z3U7 1717 aa17.39■□□□□ 0.37
SPTAN1-211ENST00000625980 NME9Q86XW9 330 aa17.38■□□□□ 0.37
SPTAN1-211ENST00000625980 NGDNQ8NEJ9 315 aaKnown RBP17.38■□□□□ 0.37
SPTAN1-211ENST00000625980 ZRANB1Q9UGI0 708 aa17.38■□□□□ 0.37
SPTAN1-211ENST00000625980 POLR3AO14802 1390 aaPredicted RBP17.37■□□□□ 0.37
SPTAN1-211ENST00000625980 C19orf44Q9H6X5 657 aa17.37■□□□□ 0.37
SPTAN1-211ENST00000625980 USP6P35125 1406 aa17.37■□□□□ 0.37
SPTAN1-211ENST00000625980 TTC21BQ7Z4L5 1316 aa17.36■□□□□ 0.37
SPTAN1-211ENST00000625980 KIF20BQ96Q89 1820 aa17.36■□□□□ 0.37
SPTAN1-211ENST00000625980 PHF8Q9UPP1 1060 aa17.35■□□□□ 0.37
SPTAN1-211ENST00000625980 NCOA3Q9Y6Q9 1424 aa17.35■□□□□ 0.37
SPTAN1-211ENST00000625980 ESCO1Q5FWF5 840 aa17.34■□□□□ 0.37
SPTAN1-211ENST00000625980 SSH2Q76I76 1423 aa17.34■□□□□ 0.37
SPTAN1-211ENST00000625980 DMRT2Q9Y5R5 561 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms