RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 YTHDC2Q9H6S0 1430 aaKnown RBP15.85■□□□□ 0.13
SSBP4-215ENST00000625926 MYOM2P54296 1465 aa15.84■□□□□ 0.13
SSBP4-215ENST00000625926 NRXN1Q9ULB1 1477 aa15.84■□□□□ 0.13
SSBP4-215ENST00000625926 NUTM2BA6NNL0 878 aaPredicted RBP15.84■□□□□ 0.13
SSBP4-215ENST00000625926 NUTM2EB1AL46 878 aaPredicted RBP15.84■□□□□ 0.13
SSBP4-215ENST00000625926 ESCO1Q5FWF5 840 aa15.84■□□□□ 0.13
SSBP4-215ENST00000625926 NUTM2AQ8IVF1 878 aaPredicted RBP15.84■□□□□ 0.13
SSBP4-215ENST00000625926 KDM2AQ9Y2K7 1162 aa15.84■□□□□ 0.13
SSBP4-215ENST00000625926 PLEKHH1Q9ULM0 1364 aa15.83■□□□□ 0.12
SSBP4-215ENST00000625926 SOS2Q07890 1332 aaPredicted RBP15.82■□□□□ 0.12
SSBP4-215ENST00000625926 NUTM2FA1L443 756 aa15.81■□□□□ 0.12
SSBP4-215ENST00000625926 ZNF772Q68DY9 489 aaPredicted RBP15.81■□□□□ 0.12
SSBP4-215ENST00000625926 PRAM1Q96QH2 718 aa15.8■□□□□ 0.12
SSBP4-215ENST00000625926 NALCNQ8IZF0 1738 aa15.8■□□□□ 0.12
SSBP4-215ENST00000625926 LRP6O75581 1613 aa15.79■□□□□ 0.12
SSBP4-215ENST00000625926 NPHP3Q7Z494 1330 aa15.79■□□□□ 0.12
SSBP4-215ENST00000625926 POGKQ9P215 609 aa15.79■□□□□ 0.12
SSBP4-215ENST00000625926 PNPLA6Q8IY17 1366 aa15.78■□□□□ 0.12
SSBP4-215ENST00000625926 FOXO3O43524 673 aa15.78■□□□□ 0.12
SSBP4-215ENST00000625926 SAFB2Q14151 953 aaKnown RBP eCLIP15.77■□□□□ 0.121e-6■■■■□ 20.5
SSBP4-215ENST00000625926 CDC42BPGQ6DT37 1551 aa15.76■□□□□ 0.11
SSBP4-215ENST00000625926 TRAK1Q9UPV9 953 aa15.76■□□□□ 0.11
SSBP4-215ENST00000625926 IFT172Q9UG01 1749 aa15.76■□□□□ 0.11
SSBP4-215ENST00000625926 C8orf37Q96NL8 207 aa15.74■□□□□ 0.11
SSBP4-215ENST00000625926 NHSL1Q5SYE7 1610 aa15.73■□□□□ 0.11
SSBP4-215ENST00000625926 ADAMTS2O95450 1211 aa15.73■□□□□ 0.11
SSBP4-215ENST00000625926 XPCQ01831 940 aaPredicted RBP15.73■□□□□ 0.11
SSBP4-215ENST00000625926 SHPRHQ149N8 1683 aa15.73■□□□□ 0.11
SSBP4-215ENST00000625926 AFF2P51816 1311 aa15.72■□□□□ 0.11
SSBP4-215ENST00000625926 NGLY1Q96IV0 654 aa15.72■□□□□ 0.11
SSBP4-215ENST00000625926 PHF8Q9UPP1 1060 aa15.72■□□□□ 0.11
SSBP4-215ENST00000625926 RXRBP28702 533 aa15.71■□□□□ 0.11
SSBP4-215ENST00000625926 DLC1Q96QB1 1528 aa15.71■□□□□ 0.11
SSBP4-215ENST00000625926 ADGRB1O14514 1584 aa15.7■□□□□ 0.1
SSBP4-215ENST00000625926 LAMC1P11047 1609 aa15.7■□□□□ 0.1
SSBP4-215ENST00000625926 KRT28Q7Z3Y7 464 aa15.7■□□□□ 0.1
SSBP4-215ENST00000625926 UPF1Q92900 1129 aaKnown RBP eCLIP15.7■□□□□ 0.1
SSBP4-215ENST00000625926 HIRIP3Q9BW71 556 aaPredicted RBP15.7■□□□□ 0.1
SSBP4-215ENST00000625926 PSME1Q06323 249 aa15.69■□□□□ 0.1
SSBP4-215ENST00000625926 MINK1Q8N4C8 1332 aaPredicted RBP15.68■□□□□ 0.1
SSBP4-215ENST00000625926 KNDC1Q76NI1 1749 aa15.68■□□□□ 0.1
SSBP4-215ENST00000625926 PXDNQ92626 1479 aa15.68■□□□□ 0.1
SSBP4-215ENST00000625926 QTRT2Q9H974 415 aaKnown RBP15.68■□□□□ 0.1
SSBP4-215ENST00000625926 SPATA31A3Q5VYP0 1347 aa15.68■□□□□ 0.1
SSBP4-215ENST00000625926 WASLO00401 505 aaPredicted RBP15.67■□□□□ 0.1
SSBP4-215ENST00000625926 PMFBP1Q8TBY8 1022 aa15.66■□□□□ 0.1
SSBP4-215ENST00000625926 FNBP4Q8N3X1 1017 aaPredicted RBP15.65■□□□□ 0.1
SSBP4-215ENST00000625926 USP21Q9UK80 565 aa15.65■□□□□ 0.1
SSBP4-215ENST00000625926 ANKARQ7Z5J8 1434 aa15.65■□□□□ 0.1
SSBP4-215ENST00000625926 EIF3AQ14152 1382 aaKnown RBP15.64■□□□□ 0.09
SSBP4-215ENST00000625926 RBM6P78332 1123 aaKnown RBP15.64■□□□□ 0.09
SSBP4-215ENST00000625926 NBPF1Q3BBV0 1214 aa15.64■□□□□ 0.09
SSBP4-215ENST00000625926 L3MBTL2Q969R5 705 aa15.64■□□□□ 0.09
SSBP4-215ENST00000625926 SIN3AQ96ST3 1273 aa15.64■□□□□ 0.09
SSBP4-215ENST00000625926 NEUROD1Q13562 356 aa15.63■□□□□ 0.09
SSBP4-215ENST00000625926 TRPC5Q9UL62 973 aaPredicted RBP15.62■□□□□ 0.09
SSBP4-215ENST00000625926 PRR36Q9H6K5 1346 aa15.62■□□□□ 0.09
SSBP4-215ENST00000625926 SBNO1A3KN83 1393 aa15.62■□□□□ 0.09
SSBP4-215ENST00000625926 FMN2Q9NZ56 1722 aa15.61■□□□□ 0.09
SSBP4-215ENST00000625926 LMOD2Q6P5Q4 547 aa15.61■□□□□ 0.09
SSBP4-215ENST00000625926 HAP1P54257 671 aaPredicted RBP15.6■□□□□ 0.09
SSBP4-215ENST00000625926 CDK19Q9BWU1 502 aa15.6■□□□□ 0.09
SSBP4-215ENST00000625926 GPRASP1Q5JY77 1395 aa15.6■□□□□ 0.09
SSBP4-215ENST00000625926 TNS3Q68CZ2 1445 aa15.6■□□□□ 0.09
SSBP4-215ENST00000625926 NGDNQ8NEJ9 315 aaKnown RBP15.59■□□□□ 0.09
SSBP4-215ENST00000625926 NUDT16Q96DE0 195 aaKnown RBP15.59■□□□□ 0.09
SSBP4-215ENST00000625926 CDK12Q9NYV4 1490 aaPredicted RBP15.59■□□□□ 0.09
SSBP4-215ENST00000625926 ADGRB2O60241 1585 aa15.58■□□□□ 0.09
SSBP4-215ENST00000625926 TRIM26Q12899 539 aaPredicted RBP15.58■□□□□ 0.08
SSBP4-215ENST00000625926 CABLES1Q8TDN4 633 aa15.58■□□□□ 0.08
SSBP4-215ENST00000625926 ARHGEF10O15013 1369 aa15.58■□□□□ 0.08
SSBP4-215ENST00000625926 COL22A1Q8NFW1 1626 aaPredicted RBP15.57■□□□□ 0.08
SSBP4-215ENST00000625926 KIF1AQ12756 1690 aa15.57■□□□□ 0.08
SSBP4-215ENST00000625926 PLEKHG5O94827 1062 aa15.57■□□□□ 0.08
SSBP4-215ENST00000625926 CCDC61Q9Y6R9 512 aa15.56■□□□□ 0.08
SSBP4-215ENST00000625926 TULP4Q9NRJ4 1543 aa15.56■□□□□ 0.08
SSBP4-215ENST00000625926 BCL9LQ86UU0 1499 aa15.55■□□□□ 0.08
SSBP4-215ENST00000625926 CENPJQ9HC77 1338 aaPredicted RBP15.55■□□□□ 0.08
SSBP4-215ENST00000625926 UNC5CLQ8IV45 518 aa15.55■□□□□ 0.08
SSBP4-215ENST00000625926 ATRNO75882 1429 aa15.54■□□□□ 0.08
SSBP4-215ENST00000625926 PAK3O75914 559 aaPredicted RBP15.54■□□□□ 0.08
SSBP4-215ENST00000625926 GJD4Q96KN9 370 aaPredicted RBP15.54■□□□□ 0.08
SSBP4-215ENST00000625926 SRPK2P78362 688 aaKnown RBP15.53■□□□□ 0.08
SSBP4-215ENST00000625926 RGS12O14924 1447 aa15.52■□□□□ 0.08
SSBP4-215ENST00000625926 PLEKHG3A1L390 1219 aa15.52■□□□□ 0.08
SSBP4-215ENST00000625926 USP32Q8NFA0 1604 aa15.52■□□□□ 0.08
SSBP4-215ENST00000625926 NBPF8Q3BBV2 869 aa15.51■□□□□ 0.07
SSBP4-215ENST00000625926 ATP7BP35670 1465 aa15.51■□□□□ 0.07
SSBP4-215ENST00000625926 ACEP12821 1306 aa15.5■□□□□ 0.07
SSBP4-215ENST00000625926 SLIT2O94813 1529 aa15.5■□□□□ 0.07
SSBP4-215ENST00000625926 FAM83GA6ND36 823 aa15.5■□□□□ 0.07
SSBP4-215ENST00000625926 CABP2Q9NPB3 220 aa15.5■□□□□ 0.07
SSBP4-215ENST00000625926 ROCK2O75116 1388 aaKnown RBP15.49■□□□□ 0.07
SSBP4-215ENST00000625926 KIAA1210Q9ULL0 1709 aa15.48■□□□□ 0.07
SSBP4-215ENST00000625926 VPS72Q15906 364 aa15.48■□□□□ 0.07
SSBP4-215ENST00000625926 POLR3AO14802 1390 aaPredicted RBP15.48■□□□□ 0.07
SSBP4-215ENST00000625926 ARHGEF28Q8N1W1 1705 aaKnown RBP15.47■□□□□ 0.07
SSBP4-215ENST00000625926 EVC2Q86UK5 1308 aa15.46■□□□□ 0.07
SSBP4-215ENST00000625926 CCDC9Q9Y3X0 531 aaKnown RBP15.46■□□□□ 0.07
SSBP4-215ENST00000625926 ATAD2Q6PL18 1390 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms