RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 RGL3Q3MIN7 710 aa21.62■■□□□ 1.05
TUBB3-215ENST00000625617 TECPR2O15040 1411 aa21.62■■□□□ 1.05
TUBB3-215ENST00000625617 RBM6P78332 1123 aaKnown RBP21.61■■□□□ 1.05
TUBB3-215ENST00000625617 NGLY1Q96IV0 654 aa21.61■■□□□ 1.05
TUBB3-215ENST00000625617 QTRT2Q9H974 415 aaKnown RBP21.61■■□□□ 1.05
TUBB3-215ENST00000625617 NPHP3Q7Z494 1330 aa21.6■■□□□ 1.05
TUBB3-215ENST00000625617 MPHOSPH9Q99550 1183 aa21.6■■□□□ 1.05
TUBB3-215ENST00000625617 LRPPRCP42704 1394 aaKnown RBP21.6■■□□□ 1.05
TUBB3-215ENST00000625617 PIK3C2GO75747 1445 aa21.58■■□□□ 1.05
TUBB3-215ENST00000625617 ESCO1Q5FWF5 840 aa21.58■■□□□ 1.05
TUBB3-215ENST00000625617 STK26Q9P289 416 aa21.58■■□□□ 1.05
TUBB3-215ENST00000625617 ABCC11Q96J66 1382 aa21.56■■□□□ 1.04
TUBB3-215ENST00000625617 MYOM2P54296 1465 aa21.56■■□□□ 1.04
TUBB3-215ENST00000625617 PXDNQ92626 1479 aa21.56■■□□□ 1.04
TUBB3-215ENST00000625617 COL22A1Q8NFW1 1626 aaPredicted RBP21.55■■□□□ 1.04
TUBB3-215ENST00000625617 IFT172Q9UG01 1749 aa21.55■■□□□ 1.04
TUBB3-215ENST00000625617 USP21Q9UK80 565 aa21.55■■□□□ 1.04
TUBB3-215ENST00000625617 WAPLQ7Z5K2 1190 aa21.54■■□□□ 1.04
TUBB3-215ENST00000625617 PLEKHH1Q9ULM0 1364 aa21.53■■□□□ 1.04
TUBB3-215ENST00000625617 KNDC1Q76NI1 1749 aa21.53■■□□□ 1.04
TUBB3-215ENST00000625617 TMEM132EQ6IEE7 984 aa21.53■■□□□ 1.04
TUBB3-215ENST00000625617 NUTM2FA1L443 756 aa21.52■■□□□ 1.04
TUBB3-215ENST00000625617 FOXO3O43524 673 aa21.52■■□□□ 1.04
TUBB3-215ENST00000625617 XPCQ01831 940 aaPredicted RBP21.52■■□□□ 1.04
TUBB3-215ENST00000625617 TRPC5Q9UL62 973 aaPredicted RBP21.52■■□□□ 1.04
TUBB3-215ENST00000625617 YTHDC2Q9H6S0 1430 aaKnown RBP21.52■■□□□ 1.04
TUBB3-215ENST00000625617 FNBP4Q8N3X1 1017 aaPredicted RBP21.51■■□□□ 1.03
TUBB3-215ENST00000625617 ACIN1Q9UKV3 1341 aaKnown RBP21.51■■□□□ 1.03
TUBB3-215ENST00000625617 ATRNO75882 1429 aa21.49■■□□□ 1.03
TUBB3-215ENST00000625617 ATAD2Q6PL18 1390 aa21.48■■□□□ 1.03
TUBB3-215ENST00000625617 NRXN1Q9ULB1 1477 aa21.46■■□□□ 1.03
TUBB3-215ENST00000625617 FMN2Q9NZ56 1722 aa21.46■■□□□ 1.03
TUBB3-215ENST00000625617 KIF1AQ12756 1690 aa21.45■■□□□ 1.02
TUBB3-215ENST00000625617 C14orf93Q9H972 538 aaKnown RBP21.44■■□□□ 1.02
TUBB3-215ENST00000625617 SIRT1Q96EB6 747 aa21.43■■□□□ 1.02
TUBB3-215ENST00000625617 DHX57Q6P158 1386 aaKnown RBP21.43■■□□□ 1.02
TUBB3-215ENST00000625617 BCL9LQ86UU0 1499 aa21.43■■□□□ 1.02
TUBB3-215ENST00000625617 SPATA31A3Q5VYP0 1347 aa21.42■■□□□ 1.02
TUBB3-215ENST00000625617 CFAP70Q5T0N1 1121 aa21.41■■□□□ 1.02
TUBB3-215ENST00000625617 RAB3GAP2Q9H2M9 1393 aa21.4■■□□□ 1.02
TUBB3-215ENST00000625617 TNS3Q68CZ2 1445 aa21.38■■□□□ 1.01
TUBB3-215ENST00000625617 KRT28Q7Z3Y7 464 aa21.38■■□□□ 1.01
TUBB3-215ENST00000625617 PRAM1Q96QH2 718 aa21.38■■□□□ 1.01
TUBB3-215ENST00000625617 PHF8Q9UPP1 1060 aa21.38■■□□□ 1.01
TUBB3-215ENST00000625617 SAFB2Q14151 953 aaKnown RBP eCLIP21.37■■□□□ 1.01
TUBB3-215ENST00000625617 MARF1Q9Y4F3 1742 aaKnown RBP21.37■■□□□ 1.01
TUBB3-215ENST00000625617 USP32Q8NFA0 1604 aa21.37■■□□□ 1.01
TUBB3-215ENST00000625617 SLIT2O94813 1529 aa21.36■■□□□ 1.01
TUBB3-215ENST00000625617 DLC1Q96QB1 1528 aa21.36■■□□□ 1.01
TUBB3-215ENST00000625617 GJD4Q96KN9 370 aaPredicted RBP21.36■■□□□ 1.01
TUBB3-215ENST00000625617 HAP1P54257 671 aaPredicted RBP21.35■■□□□ 1.01
TUBB3-215ENST00000625617 PSME1Q06323 249 aa21.34■■□□□ 1.01
TUBB3-215ENST00000625617 UNC5CLQ8IV45 518 aa21.34■■□□□ 1.01
TUBB3-215ENST00000625617 POGKQ9P215 609 aa21.34■■□□□ 1.01
TUBB3-215ENST00000625617 ANKARQ7Z5J8 1434 aa21.34■■□□□ 1.01
TUBB3-215ENST00000625617 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.34■■□□□ 1.01
TUBB3-215ENST00000625617 SBNO1A3KN83 1393 aa21.33■■□□□ 1
TUBB3-215ENST00000625617 RALGAPBQ86X10 1494 aa21.32■■□□□ 1
TUBB3-215ENST00000625617 ADGRB1O14514 1584 aa21.32■■□□□ 1
TUBB3-215ENST00000625617 ADGRB2O60241 1585 aa21.32■■□□□ 1
TUBB3-215ENST00000625617 ARHGEF10O15013 1369 aa21.32■■□□□ 1
TUBB3-215ENST00000625617 GLI3P10071 1580 aa21.3■■□□□ 1
TUBB3-215ENST00000625617 LMOD2Q6P5Q4 547 aa21.29■■□□□ 1
TUBB3-215ENST00000625617 EIF3AQ14152 1382 aaKnown RBP21.28■■□□□ 1
TUBB3-215ENST00000625617 PLEKHG5O94827 1062 aa21.28■■□□□ 1
TUBB3-215ENST00000625617 CABLES1Q8TDN4 633 aa21.28■■□□□ 1
TUBB3-215ENST00000625617 CCDC125Q86Z20 511 aa21.27■■□□□ 1
TUBB3-215ENST00000625617 PMFBP1Q8TBY8 1022 aa21.27■■□□□ 1
TUBB3-215ENST00000625617 TRAK1Q9UPV9 953 aa21.27■■□□□ 1
TUBB3-215ENST00000625617 HIRIP3Q9BW71 556 aaPredicted RBP21.25■□□□□ 0.99
TUBB3-215ENST00000625617 RGPD8O14715 1765 aaPredicted RBP21.25■□□□□ 0.99
TUBB3-215ENST00000625617 TULP4Q9NRJ4 1543 aa21.24■□□□□ 0.99
TUBB3-215ENST00000625617 ABCA3Q99758 1704 aa21.24■□□□□ 0.99
TUBB3-215ENST00000625617 VPS72Q15906 364 aa21.24■□□□□ 0.99
TUBB3-215ENST00000625617 DCAF11Q8TEB1 546 aa21.24■□□□□ 0.99
TUBB3-215ENST00000625617 KDM2AQ9Y2K7 1162 aa21.24■□□□□ 0.99
TUBB3-215ENST00000625617 MINK1Q8N4C8 1332 aaPredicted RBP21.24■□□□□ 0.99
TUBB3-215ENST00000625617 ZRANB1Q9UGI0 708 aa21.23■□□□□ 0.99
TUBB3-215ENST00000625617 CCDC9Q9Y3X0 531 aaKnown RBP21.23■□□□□ 0.99
TUBB3-215ENST00000625617 GPRASP1Q5JY77 1395 aa21.23■□□□□ 0.99
TUBB3-215ENST00000625617 EP400Q96L91 3159 aa21.22■□□□□ 0.99
TUBB3-215ENST00000625617 BLMP54132 1417 aaPredicted RBP21.22■□□□□ 0.99
TUBB3-215ENST00000625617 PLCH1Q4KWH8 1693 aa21.22■□□□□ 0.99
TUBB3-215ENST00000625617 SEPT12Q8IYM1 358 aa21.21■□□□□ 0.99
TUBB3-215ENST00000625617 STAC3Q96MF2 364 aa21.21■□□□□ 0.99
TUBB3-215ENST00000625617 PRR36Q9H6K5 1346 aa21.21■□□□□ 0.99
TUBB3-215ENST00000625617 NWD2Q9ULI1 1742 aa21.21■□□□□ 0.99
TUBB3-215ENST00000625617 WASLO00401 505 aaPredicted RBP21.19■□□□□ 0.98
TUBB3-215ENST00000625617 TRPM3Q9HCF6 1732 aaPredicted RBP21.18■□□□□ 0.98
TUBB3-215ENST00000625617 FAM83GA6ND36 823 aa21.16■□□□□ 0.98
TUBB3-215ENST00000625617 HRCP23327 699 aa21.16■□□□□ 0.98
TUBB3-215ENST00000625617 NGDNQ8NEJ9 315 aaKnown RBP21.16■□□□□ 0.98
TUBB3-215ENST00000625617 ALS2Q96Q42 1657 aa21.15■□□□□ 0.98
TUBB3-215ENST00000625617 A0A0G2JS52 829 aa21.15■□□□□ 0.98
TUBB3-215ENST00000625617 MYT1Q01538 1121 aa21.15■□□□□ 0.98
TUBB3-215ENST00000625617 SF3B2Q13435 895 aaKnown RBP21.15■□□□□ 0.98
TUBB3-215ENST00000625617 ATP7BP35670 1465 aa21.14■□□□□ 0.98
TUBB3-215ENST00000625617 ONECUT3O60422 494 aaPredicted RBP21.13■□□□□ 0.97
TUBB3-215ENST00000625617 KRT27Q7Z3Y8 459 aa21.13■□□□□ 0.97
TUBB3-215ENST00000625617 BTG4Q9NY30 223 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms