RNA–Protein interactions for RNA: ENST00000625581.2

SOX2-OT-237, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 495 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-237ENST00000625581 CADPS2Q86UW7 1296 aa20.89■□□□□ 0.93
SOX2-OT-237ENST00000625581 SIRT1Q96EB6 747 aa20.89■□□□□ 0.93
SOX2-OT-237ENST00000625581 ATF3P18847 181 aa20.87■□□□□ 0.93
SOX2-OT-237ENST00000625581 NBPF1Q3BBV0 1214 aa20.87■□□□□ 0.93
SOX2-OT-237ENST00000625581 SLAIN2Q9P270 581 aa20.87■□□□□ 0.93
SOX2-OT-237ENST00000625581 NBPF8Q3BBV2 869 aa20.85■□□□□ 0.93
SOX2-OT-237ENST00000625581 PRAM1Q96QH2 718 aa20.85■□□□□ 0.93
SOX2-OT-237ENST00000625581 TRAK1Q9UPV9 953 aa20.85■□□□□ 0.93
SOX2-OT-237ENST00000625581 NHSL1Q5SYE7 1610 aa20.85■□□□□ 0.93
SOX2-OT-237ENST00000625581 RALGAPBQ86X10 1494 aa20.84■□□□□ 0.93
SOX2-OT-237ENST00000625581 AHDC1Q5TGY3 1603 aaPredicted RBP20.84■□□□□ 0.93
SOX2-OT-237ENST00000625581 PHLPP1O60346 1717 aa20.84■□□□□ 0.93
SOX2-OT-237ENST00000625581 C1orf167Q5SNV9 1468 aa20.83■□□□□ 0.93
SOX2-OT-237ENST00000625581 HSPA1LP34931 641 aa20.83■□□□□ 0.93
SOX2-OT-237ENST00000625581 QRICH2Q9H0J4 1663 aa20.82■□□□□ 0.92
SOX2-OT-237ENST00000625581 COL16A1Q07092 1604 aaPredicted RBP20.82■□□□□ 0.92
SOX2-OT-237ENST00000625581 RGPD8O14715 1765 aaPredicted RBP20.81■□□□□ 0.92
SOX2-OT-237ENST00000625581 GPRASP1Q5JY77 1395 aa20.81■□□□□ 0.92
SOX2-OT-237ENST00000625581 USP32Q8NFA0 1604 aa20.81■□□□□ 0.92
SOX2-OT-237ENST00000625581 SAFB2Q14151 953 aaKnown RBP eCLIP20.79■□□□□ 0.92
SOX2-OT-237ENST00000625581 BRINP3Q76B58 766 aa20.79■□□□□ 0.92
SOX2-OT-237ENST00000625581 CCER1Q8TC90 406 aaPredicted RBP20.79■□□□□ 0.92
SOX2-OT-237ENST00000625581 ROCK2O75116 1388 aaKnown RBP20.79■□□□□ 0.92
SOX2-OT-237ENST00000625581 POGKQ9P215 609 aa20.77■□□□□ 0.92
SOX2-OT-237ENST00000625581 KIF1AQ12756 1690 aa20.74■□□□□ 0.91
SOX2-OT-237ENST00000625581 TULP4Q9NRJ4 1543 aa20.73■□□□□ 0.91
SOX2-OT-237ENST00000625581 MINK1Q8N4C8 1332 aaPredicted RBP20.73■□□□□ 0.91
SOX2-OT-237ENST00000625581 HIRIP3Q9BW71 556 aaPredicted RBP20.72■□□□□ 0.91
SOX2-OT-237ENST00000625581 TIMELESSQ9UNS1 1208 aa20.72■□□□□ 0.91
SOX2-OT-237ENST00000625581 ANKARQ7Z5J8 1434 aa20.71■□□□□ 0.91
SOX2-OT-237ENST00000625581 TOPAZ1Q8N9V7 1692 aa20.71■□□□□ 0.91
SOX2-OT-237ENST00000625581 ITSN1Q15811 1721 aa20.71■□□□□ 0.91
SOX2-OT-237ENST00000625581 ORAI2Q96SN7 254 aa20.71■□□□□ 0.91
SOX2-OT-237ENST00000625581 CENPJQ9HC77 1338 aaPredicted RBP20.7■□□□□ 0.9
SOX2-OT-237ENST00000625581 SHPRHQ149N8 1683 aa20.7■□□□□ 0.9
SOX2-OT-237ENST00000625581 NUTM2FA1L443 756 aa20.69■□□□□ 0.9
SOX2-OT-237ENST00000625581 ATP7BP35670 1465 aa20.69■□□□□ 0.9
SOX2-OT-237ENST00000625581 EIF3AQ14152 1382 aaKnown RBP20.67■□□□□ 0.9
SOX2-OT-237ENST00000625581 PXDNQ92626 1479 aa20.67■□□□□ 0.9
SOX2-OT-237ENST00000625581 WASLO00401 505 aaPredicted RBP20.66■□□□□ 0.9
SOX2-OT-237ENST00000625581 DDX17Q92841 729 aaKnown RBP20.66■□□□□ 0.9
SOX2-OT-237ENST00000625581 CARD11Q9BXL7 1154 aa20.66■□□□□ 0.9
SOX2-OT-237ENST00000625581 PRR36Q9H6K5 1346 aa20.66■□□□□ 0.9
SOX2-OT-237ENST00000625581 MED1Q15648 1581 aaPredicted RBP20.65■□□□□ 0.9
SOX2-OT-237ENST00000625581 DISP3Q9P2K9 1392 aa20.65■□□□□ 0.9
SOX2-OT-237ENST00000625581 ESCO1Q5FWF5 840 aa20.64■□□□□ 0.89
SOX2-OT-237ENST00000625581 SBNO2Q9Y2G9 1366 aa20.62■□□□□ 0.89
SOX2-OT-237ENST00000625581 JCADQ9P266 1359 aa20.61■□□□□ 0.89
SOX2-OT-237ENST00000625581 SOS2Q07890 1332 aaPredicted RBP20.61■□□□□ 0.89
SOX2-OT-237ENST00000625581 TRPM3Q9HCF6 1732 aaPredicted RBP20.61■□□□□ 0.89
SOX2-OT-237ENST00000625581 CDK19Q9BWU1 502 aa20.6■□□□□ 0.89
SOX2-OT-237ENST00000625581 COL22A1Q8NFW1 1626 aaPredicted RBP20.6■□□□□ 0.89
SOX2-OT-237ENST00000625581 NPHP3Q7Z494 1330 aa20.59■□□□□ 0.89
SOX2-OT-237ENST00000625581 ILDR2Q71H61 639 aa20.59■□□□□ 0.89
SOX2-OT-237ENST00000625581 PHF8Q9UPP1 1060 aa20.58■□□□□ 0.89
SOX2-OT-237ENST00000625581 FOXO3O43524 673 aa20.57■□□□□ 0.88
SOX2-OT-237ENST00000625581 PNPLA6Q8IY17 1366 aa20.57■□□□□ 0.88
SOX2-OT-237ENST00000625581 NUDT16Q96DE0 195 aaKnown RBP20.56■□□□□ 0.88
SOX2-OT-237ENST00000625581 USP47Q96K76 1375 aa20.56■□□□□ 0.88
SOX2-OT-237ENST00000625581 LRP6O75581 1613 aa20.56■□□□□ 0.88
SOX2-OT-237ENST00000625581 ALS2Q96Q42 1657 aa20.54■□□□□ 0.88
SOX2-OT-237ENST00000625581 XPCQ01831 940 aaPredicted RBP20.54■□□□□ 0.88
SOX2-OT-237ENST00000625581 PMFBP1Q8TBY8 1022 aa20.53■□□□□ 0.88
SOX2-OT-237ENST00000625581 CABP2Q9NPB3 220 aa20.53■□□□□ 0.88
SOX2-OT-237ENST00000625581 ABCA3Q99758 1704 aa20.53■□□□□ 0.88
SOX2-OT-237ENST00000625581 EVC2Q86UK5 1308 aa20.53■□□□□ 0.88
SOX2-OT-237ENST00000625581 SRPK2P78362 688 aaKnown RBP20.52■□□□□ 0.88
SOX2-OT-237ENST00000625581 LRRC59Q96AG4 307 aaKnown RBP20.52■□□□□ 0.88
SOX2-OT-237ENST00000625581 TESK2Q96S53 571 aa20.52■□□□□ 0.88
SOX2-OT-237ENST00000625581 PPIP5K1Q6PFW1 1433 aa20.52■□□□□ 0.87
SOX2-OT-237ENST00000625581 AKAP12Q02952 1782 aa20.51■□□□□ 0.87
SOX2-OT-237ENST00000625581 POLR3AO14802 1390 aaPredicted RBP20.51■□□□□ 0.87
SOX2-OT-237ENST00000625581 TNS3Q68CZ2 1445 aa20.51■□□□□ 0.87
SOX2-OT-237ENST00000625581 SPATA31A6Q5VVP1 1343 aa20.51■□□□□ 0.87
SOX2-OT-237ENST00000625581 ST20-MTHFSA0A0A6YYL1 179 aa20.5■□□□□ 0.87
SOX2-OT-237ENST00000625581 KRT28Q7Z3Y7 464 aa20.49■□□□□ 0.87
SOX2-OT-237ENST00000625581 CCDC61Q9Y6R9 512 aa20.49■□□□□ 0.87
SOX2-OT-237ENST00000625581 CRYBG1Q9Y4K1 1723 aa20.49■□□□□ 0.87
SOX2-OT-237ENST00000625581 SBNO1A3KN83 1393 aa20.48■□□□□ 0.87
SOX2-OT-237ENST00000625581 SPATA31A3Q5VYP0 1347 aa20.48■□□□□ 0.87
SOX2-OT-237ENST00000625581 MARF1Q9Y4F3 1742 aaKnown RBP20.47■□□□□ 0.87
SOX2-OT-237ENST00000625581 PLEKHG3A1L390 1219 aa20.47■□□□□ 0.87
SOX2-OT-237ENST00000625581 NRKQ7Z2Y5 1582 aa20.46■□□□□ 0.87
SOX2-OT-237ENST00000625581 ATAD2Q6PL18 1390 aa20.46■□□□□ 0.87
SOX2-OT-237ENST00000625581 MON2Q7Z3U7 1717 aa20.45■□□□□ 0.86
SOX2-OT-237ENST00000625581 ACEP12821 1306 aa20.45■□□□□ 0.86
SOX2-OT-237ENST00000625581 PSME1Q06323 249 aa20.44■□□□□ 0.86
SOX2-OT-237ENST00000625581 NGDNQ8NEJ9 315 aaKnown RBP20.44■□□□□ 0.86
SOX2-OT-237ENST00000625581 CD163L1Q9NR16 1453 aa20.42■□□□□ 0.86
SOX2-OT-237ENST00000625581 MYOM1P52179 1685 aa20.42■□□□□ 0.86
SOX2-OT-237ENST00000625581 CABP1Q9NZU7 370 aa20.41■□□□□ 0.86
SOX2-OT-237ENST00000625581 ARHGEF10O15013 1369 aa20.41■□□□□ 0.86
SOX2-OT-237ENST00000625581 USP6P35125 1406 aa20.41■□□□□ 0.86
SOX2-OT-237ENST00000625581 PHRF1Q9P1Y6 1649 aaKnown RBP20.41■□□□□ 0.86
SOX2-OT-237ENST00000625581 CPSF1Q10570 1443 aaKnown RBP20.4■□□□□ 0.86
SOX2-OT-237ENST00000625581 PIK3C2AO00443 1686 aa20.39■□□□□ 0.86
SOX2-OT-237ENST00000625581 SSH2Q76I76 1423 aa20.39■□□□□ 0.85
SOX2-OT-237ENST00000625581 NUTM2BA6NNL0 878 aaPredicted RBP20.39■□□□□ 0.85
SOX2-OT-237ENST00000625581 NUTM2EB1AL46 878 aaPredicted RBP20.39■□□□□ 0.85
SOX2-OT-237ENST00000625581 NUTM2AQ8IVF1 878 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms