RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 TRIM32Q13049 653 aa7.84□□□□□ -1.15
CHD2-203ENST00000625243 HIC1Q14526 733 aa7.84□□□□□ -1.15
CHD2-203ENST00000625243 MSS51Q4VC12 460 aa7.84□□□□□ -1.15
CHD2-203ENST00000625243 GCGRP47871 477 aa7.83□□□□□ -1.16
CHD2-203ENST00000625243 HPS1Q92902 700 aa7.83□□□□□ -1.16
CHD2-203ENST00000625243 KIFC2Q96AC6 838 aa7.83□□□□□ -1.16
CHD2-203ENST00000625243 FAM181BA6NEQ2 426 aa7.82□□□□□ -1.16
CHD2-203ENST00000625243 RNF19BQ6ZMZ0 732 aa7.82□□□□□ -1.16
CHD2-203ENST00000625243 SLC16A10Q8TF71 515 aa7.81□□□□□ -1.16
CHD2-203ENST00000625243 NLRP7Q8WX94 980 aa7.81□□□□□ -1.16
CHD2-203ENST00000625243 SEMA3EO15041 775 aa7.8□□□□□ -1.16
CHD2-203ENST00000625243 SULF1Q8IWU6 871 aa7.8□□□□□ -1.16
CHD2-203ENST00000625243 GRIPAP1Q4V328 841 aa7.79□□□□□ -1.16
CHD2-203ENST00000625243 REPIN1Q9BWE0 567 aaKnown RBP7.79□□□□□ -1.16
CHD2-203ENST00000625243 TSHZ2Q9NRE2 1034 aa7.79□□□□□ -1.16
CHD2-203ENST00000625243 GNPATO15228 680 aa7.78□□□□□ -1.16
CHD2-203ENST00000625243 MMP16P51512 607 aa7.78□□□□□ -1.16
CHD2-203ENST00000625243 GMPRP36959 345 aa7.77□□□□□ -1.17
CHD2-203ENST00000625243 Q3C1V9 767 aa7.77□□□□□ -1.17
CHD2-203ENST00000625243 RC3H1Q5TC82 1133 aaKnown RBP7.77□□□□□ -1.17
CHD2-203ENST00000625243 NXF1Q9UBU9 619 aaKnown RBP7.77□□□□□ -1.17
CHD2-203ENST00000625243 RBM26Q5T8P6 1007 aaKnown RBP7.76□□□□□ -1.17
CHD2-203ENST00000625243 ZSCAN1Q8NBB4 408 aa7.76□□□□□ -1.17
CHD2-203ENST00000625243 LOC100996750A0A140TA64 210 aa7.75□□□□□ -1.17
CHD2-203ENST00000625243 CCDC24Q8N4L8 307 aa7.75□□□□□ -1.17
CHD2-203ENST00000625243 KRTAP4-6Q9BYQ5 205 aa7.75□□□□□ -1.17
CHD2-203ENST00000625243 IRF7Q92985 503 aa7.74□□□□□ -1.17
CHD2-203ENST00000625243 DXOO77932 396 aaKnown RBP7.73□□□□□ -1.17
CHD2-203ENST00000625243 ALDH1A1P00352 501 aa7.73□□□□□ -1.17
CHD2-203ENST00000625243 LORP23490 312 aaPredicted RBP7.73□□□□□ -1.17
CHD2-203ENST00000625243 SKOR1P84550 965 aa7.73□□□□□ -1.17
CHD2-203ENST00000625243 PHOX2BQ99453 314 aa7.73□□□□□ -1.17
CHD2-203ENST00000625243 USB1Q9BQ65 265 aaKnown RBP7.73□□□□□ -1.17
CHD2-203ENST00000625243 VEGFBP49765 207 aa7.72□□□□□ -1.17
CHD2-203ENST00000625243 WNT7BP56706 349 aa7.72□□□□□ -1.17
CHD2-203ENST00000625243 P3H3Q8IVL6 736 aa7.72□□□□□ -1.17
CHD2-203ENST00000625243 NPAS3Q8IXF0 933 aa7.71□□□□□ -1.18
CHD2-203ENST00000625243 BMP1P13497 986 aa7.7□□□□□ -1.18
CHD2-203ENST00000625243 GPR37O15354 613 aa7.69□□□□□ -1.18
CHD2-203ENST00000625243 CAPN5O15484 640 aaPredicted RBP7.69□□□□□ -1.18
CHD2-203ENST00000625243 SMYD5Q6GMV2 418 aa7.69□□□□□ -1.18
CHD2-203ENST00000625243 TRIM46Q7Z4K8 759 aa7.69□□□□□ -1.18
CHD2-203ENST00000625243 H3BM21 787 aa7.68□□□□□ -1.18
CHD2-203ENST00000625243 TESPA1A2RU30 521 aaPredicted RBP7.67□□□□□ -1.18
CHD2-203ENST00000625243 KDM4AO75164 1064 aa7.67□□□□□ -1.18
CHD2-203ENST00000625243 WASF2Q9Y6W5 498 aa7.67□□□□□ -1.18
CHD2-203ENST00000625243 ERBB4Q15303 1308 aa7.67□□□□□ -1.18
CHD2-203ENST00000625243 SIAH2O43255 324 aa7.65□□□□□ -1.18
CHD2-203ENST00000625243 CD46P15529 392 aa7.65□□□□□ -1.18
CHD2-203ENST00000625243 EHBP1Q8NDI1 1231 aa7.65□□□□□ -1.18
CHD2-203ENST00000625243 HLA-CQ95604 372 aa7.65□□□□□ -1.18
CHD2-203ENST00000625243 AMER1Q5JTC6 1135 aaPredicted RBP7.64□□□□□ -1.19
CHD2-203ENST00000625243 JUNDP17535 347 aa7.63□□□□□ -1.19
CHD2-203ENST00000625243 SUZ12Q15022 739 aaKnown RBP7.63□□□□□ -1.19
CHD2-203ENST00000625243 USP46P62068 366 aa7.62□□□□□ -1.19
CHD2-203ENST00000625243 PTCRAQ6ISU1 281 aaPredicted RBP7.62□□□□□ -1.19
CHD2-203ENST00000625243 ZFP42Q96MM3 310 aa7.62□□□□□ -1.19
CHD2-203ENST00000625243 SYMPKQ92797 1274 aaKnown RBP7.6□□□□□ -1.19
CHD2-203ENST00000625243 NUDT12Q9BQG2 462 aa7.6□□□□□ -1.19
CHD2-203ENST00000625243 HOXA2O43364 376 aa7.59□□□□□ -1.19
CHD2-203ENST00000625243 GUCA2AQ02747 115 aa7.59□□□□□ -1.19
CHD2-203ENST00000625243 RTN4Q9NQC3 1192 aaKnown RBP7.59□□□□□ -1.19
CHD2-203ENST00000625243 SH3BP2P78314 561 aa7.58□□□□□ -1.2
CHD2-203ENST00000625243 GPIHBP1Q8IV16 184 aa7.57□□□□□ -1.2
CHD2-203ENST00000625243 SCARF1Q14162 830 aa7.56□□□□□ -1.2
CHD2-203ENST00000625243 MDM2Q00987 491 aaPredicted RBP7.55□□□□□ -1.2
CHD2-203ENST00000625243 MRPL14Q6P1L8 145 aaKnown RBP7.55□□□□□ -1.2
CHD2-203ENST00000625243 RETREG3Q86VR2 466 aa7.55□□□□□ -1.2
CHD2-203ENST00000625243 KCTD17Q8N5Z5 321 aa7.55□□□□□ -1.2
CHD2-203ENST00000625243 PURBQ96QR8 312 aaKnown RBP7.55□□□□□ -1.2
CHD2-203ENST00000625243 TLL2Q9Y6L7 1015 aa7.55□□□□□ -1.2
CHD2-203ENST00000625243 SOBPA7XYQ1 873 aa7.54□□□□□ -1.2
CHD2-203ENST00000625243 KCNMA1Q12791 1236 aa7.54□□□□□ -1.2
CHD2-203ENST00000625243 PLEKHG3A1L390 1219 aa7.53□□□□□ -1.2
CHD2-203ENST00000625243 CCNYL3P0C7X3 344 aa7.53□□□□□ -1.2
CHD2-203ENST00000625243 VSIG8P0DPA2 414 aa7.53□□□□□ -1.2
CHD2-203ENST00000625243 MS4A1P11836 297 aa7.53□□□□□ -1.2
CHD2-203ENST00000625243 NNTQ13423 1086 aa7.53□□□□□ -1.2
CHD2-203ENST00000625243 MAP2K5Q13163 448 aa7.52□□□□□ -1.21
CHD2-203ENST00000625243 LINC01559Q495D7 138 aa7.52□□□□□ -1.21
CHD2-203ENST00000625243 BAP1Q92560 729 aa7.52□□□□□ -1.21
CHD2-203ENST00000625243 WDR4P57081 412 aaKnown RBP7.51□□□□□ -1.21
CHD2-203ENST00000625243 NUTM1Q86Y26 1132 aa7.51□□□□□ -1.21
CHD2-203ENST00000625243 UNC93B1Q9H1C4 597 aa7.51□□□□□ -1.21
CHD2-203ENST00000625243 C6orf229H3BNL8 230 aa7.5□□□□□ -1.21
CHD2-203ENST00000625243 IRF6O14896 467 aa7.5□□□□□ -1.21
CHD2-203ENST00000625243 TIMP2P16035 220 aa7.5□□□□□ -1.21
CHD2-203ENST00000625243 GSK3AP49840 483 aa7.5□□□□□ -1.21
CHD2-203ENST00000625243 ADH1CP00326 375 aa7.49□□□□□ -1.21
CHD2-203ENST00000625243 VARSP26640 1264 aaKnown RBP7.49□□□□□ -1.21
CHD2-203ENST00000625243 MPNDQ8N594 471 aa7.49□□□□□ -1.21
CHD2-203ENST00000625243 EVA1BQ9NVM1 165 aa7.49□□□□□ -1.21
CHD2-203ENST00000625243 MAN1A2O60476 641 aa7.48□□□□□ -1.21
CHD2-203ENST00000625243 FDX1P10109 184 aa7.48□□□□□ -1.21
CHD2-203ENST00000625243 TMEM151AQ8N4L1 468 aa7.48□□□□□ -1.21
CHD2-203ENST00000625243 ZNF511Q8NB15 262 aa7.48□□□□□ -1.21
CHD2-203ENST00000625243 PCDHGC3Q9UN70 934 aa7.48□□□□□ -1.21
CHD2-203ENST00000625243 KCNH2Q12809 1159 aa7.47□□□□□ -1.21
CHD2-203ENST00000625243 PTPRNQ16849 979 aa7.47□□□□□ -1.21
CHD2-203ENST00000625243 PPFIA3O75145 1194 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms