RNA–Protein interactions for RNA: ENST00000624304.3

SMIM11B-205, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-205ENST00000624304 ROBO2Q9HCK4 1378 aa28.57■■■□□ 2.16
SMIM11B-205ENST00000624304 TSHZ2Q9NRE2 1034 aa28.57■■■□□ 2.16
SMIM11B-205ENST00000624304 MINK1Q8N4C8 1332 aaPredicted RBP28.55■■■□□ 2.16
SMIM11B-205ENST00000624304 TECPR2O15040 1411 aa28.55■■■□□ 2.16
SMIM11B-205ENST00000624304 CPS1P31327 1500 aa28.55■■■□□ 2.16
SMIM11B-205ENST00000624304 XRN1Q8IZH2 1706 aaKnown RBP28.53■■■□□ 2.16
SMIM11B-205ENST00000624304 SBNO2Q9Y2G9 1366 aa28.52■■■□□ 2.16
SMIM11B-205ENST00000624304 KCNA6P17658 529 aa28.52■■■□□ 2.16
SMIM11B-205ENST00000624304 TULP4Q9NRJ4 1543 aa28.49■■■□□ 2.15
SMIM11B-205ENST00000624304 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.49■■■□□ 2.15
SMIM11B-205ENST00000624304 PIK3R4Q99570 1358 aa28.48■■■□□ 2.15
SMIM11B-205ENST00000624304 FAM135BQ49AJ0 1406 aa28.47■■■□□ 2.15
SMIM11B-205ENST00000624304 SIRT1Q96EB6 747 aa28.46■■■□□ 2.15
SMIM11B-205ENST00000624304 RBM33Q96EV2 1170 aaKnown RBP28.46■■■□□ 2.15
SMIM11B-205ENST00000624304 STRCP1A6NGW2 1772 aa28.45■■■□□ 2.14
SMIM11B-205ENST00000624304 CABP2Q9NPB3 220 aa28.44■■■□□ 2.14
SMIM11B-205ENST00000624304 MYOM1P52179 1685 aa28.43■■■□□ 2.14
SMIM11B-205ENST00000624304 ANP32CO43423 234 aa28.42■■■□□ 2.14
SMIM11B-205ENST00000624304 PTCH1Q13635 1447 aa28.42■■■□□ 2.14
SMIM11B-205ENST00000624304 EVC2Q86UK5 1308 aa28.42■■■□□ 2.14
SMIM11B-205ENST00000624304 SLC24A1O60721 1099 aa28.39■■■□□ 2.14
SMIM11B-205ENST00000624304 CDK19Q9BWU1 502 aa28.39■■■□□ 2.14
SMIM11B-205ENST00000624304 CDCA8Q53HL2 280 aa28.38■■■□□ 2.13
SMIM11B-205ENST00000624304 SRPK2P78362 688 aaKnown RBP28.37■■■□□ 2.13
SMIM11B-205ENST00000624304 NWD1Q149M9 1564 aa28.36■■■□□ 2.13
SMIM11B-205ENST00000624304 NEFLP07196 543 aa28.36■■■□□ 2.13
SMIM11B-205ENST00000624304 WASLO00401 505 aaPredicted RBP28.34■■■□□ 2.13
SMIM11B-205ENST00000624304 FKBP8Q14318 412 aa28.33■■■□□ 2.13
SMIM11B-205ENST00000624304 SLC12A5Q9H2X9 1139 aa28.32■■■□□ 2.12
SMIM11B-205ENST00000624304 PANK3Q9H999 370 aa28.32■■■□□ 2.12
SMIM11B-205ENST00000624304 NALCNQ8IZF0 1738 aa28.31■■■□□ 2.12
SMIM11B-205ENST00000624304 TMC1Q8TDI8 760 aa28.31■■■□□ 2.12
SMIM11B-205ENST00000624304 NUTM2FA1L443 756 aa28.3■■■□□ 2.12
SMIM11B-205ENST00000624304 RGPD8O14715 1765 aaPredicted RBP28.29■■■□□ 2.12
SMIM11B-205ENST00000624304 ADGRB2O60241 1585 aa28.29■■■□□ 2.12
SMIM11B-205ENST00000624304 CNGB1Q14028 1251 aaPredicted RBP28.29■■■□□ 2.12
SMIM11B-205ENST00000624304 ANP32EQ9BTT0 268 aa28.28■■■□□ 2.12
SMIM11B-205ENST00000624304 PROSER2Q86WR7 435 aaPredicted RBP28.27■■■□□ 2.12
SMIM11B-205ENST00000624304 ZNF335Q9H4Z2 1342 aaPredicted RBP28.27■■■□□ 2.12
SMIM11B-205ENST00000624304 PUS7Q96PZ0 661 aaKnown RBP28.25■■■□□ 2.11
SMIM11B-205ENST00000624304 PER1O15534 1290 aaPredicted RBP28.25■■■□□ 2.11
SMIM11B-205ENST00000624304 PRR36Q9H6K5 1346 aa28.24■■■□□ 2.11
SMIM11B-205ENST00000624304 NUDT16Q96DE0 195 aaKnown RBP28.23■■■□□ 2.11
SMIM11B-205ENST00000624304 XIRP1Q702N8 1843 aaKnown RBP28.22■■■□□ 2.11
SMIM11B-205ENST00000624304 NKTRP30414 1462 aaKnown RBP28.22■■■□□ 2.11
SMIM11B-205ENST00000624304 AEBP2Q6ZN18 517 aaPredicted RBP28.22■■■□□ 2.11
SMIM11B-205ENST00000624304 CABP1Q9NZU7 370 aa28.22■■■□□ 2.11
SMIM11B-205ENST00000624304 USP32Q8NFA0 1604 aa28.21■■■□□ 2.11
SMIM11B-205ENST00000624304 CARD14Q9BXL6 1004 aa28.21■■■□□ 2.11
SMIM11B-205ENST00000624304 ATAD2Q6PL18 1390 aa28.2■■■□□ 2.11
SMIM11B-205ENST00000624304 C14orf37Q86TY3 774 aa28.19■■■□□ 2.1
SMIM11B-205ENST00000624304 ATP7BP35670 1465 aa28.19■■■□□ 2.1
SMIM11B-205ENST00000624304 DMRT2Q9Y5R5 561 aa28.19■■■□□ 2.1
SMIM11B-205ENST00000624304 TMEM94Q12767 1356 aa28.18■■■□□ 2.1
SMIM11B-205ENST00000624304 FMN2Q9NZ56 1722 aa28.18■■■□□ 2.1
SMIM11B-205ENST00000624304 ADGRL3Q9HAR2 1447 aa28.18■■■□□ 2.1
SMIM11B-205ENST00000624304 CD163L1Q9NR16 1453 aa28.16■■■□□ 2.1
SMIM11B-205ENST00000624304 PPIP5K1Q6PFW1 1433 aa28.15■■■□□ 2.1
SMIM11B-205ENST00000624304 CCDC61Q9Y6R9 512 aa28.14■■■□□ 2.1
SMIM11B-205ENST00000624304 TOPAZ1Q8N9V7 1692 aa28.14■■■□□ 2.09
SMIM11B-205ENST00000624304 CDC42BPGQ6DT37 1551 aa28.13■■■□□ 2.09
SMIM11B-205ENST00000624304 A0A1W2PP64 1363 aa28.13■■■□□ 2.09
SMIM11B-205ENST00000624304 LRRC7Q96NW7 1537 aa28.11■■■□□ 2.09
SMIM11B-205ENST00000624304 ANKRD36BQ8N2N9 1353 aa28.11■■■□□ 2.09
SMIM11B-205ENST00000624304 CC2D1BQ5T0F9 858 aaKnown RBP28.1■■■□□ 2.09
SMIM11B-205ENST00000624304 PRKRIP1Q9H875 184 aaPredicted RBP28.1■■■□□ 2.09
SMIM11B-205ENST00000624304 KNSTRNQ9Y448 316 aa28.1■■■□□ 2.09
SMIM11B-205ENST00000624304 NSD3Q9BZ95 1437 aa28.08■■■□□ 2.09
SMIM11B-205ENST00000624304 NINLQ9Y2I6 1382 aa28.08■■■□□ 2.09
SMIM11B-205ENST00000624304 PMFBP1Q8TBY8 1022 aa28.08■■■□□ 2.09
SMIM11B-205ENST00000624304 C19orf44Q9H6X5 657 aa28.08■■■□□ 2.09
SMIM11B-205ENST00000624304 ITSN1Q15811 1721 aa28.07■■■□□ 2.08
SMIM11B-205ENST00000624304 AMER1Q5JTC6 1135 aaPredicted RBP28.07■■■□□ 2.08
SMIM11B-205ENST00000624304 AKAP12Q02952 1782 aa28.06■■■□□ 2.08
SMIM11B-205ENST00000624304 TERF2IPQ9NYB0 399 aa28.04■■■□□ 2.08
SMIM11B-205ENST00000624304 CPSF1Q10570 1443 aaKnown RBP28.03■■■□□ 2.08
SMIM11B-205ENST00000624304 HDGFL2Q7Z4V5 671 aaPredicted RBP28.03■■■□□ 2.08
SMIM11B-205ENST00000624304 ACEP12821 1306 aa28.03■■■□□ 2.08
SMIM11B-205ENST00000624304 ANKARQ7Z5J8 1434 aa28.02■■■□□ 2.08
SMIM11B-205ENST00000624304 NCOA3Q9Y6Q9 1424 aa28.02■■■□□ 2.08
SMIM11B-205ENST00000624304 PLEKHG3A1L390 1219 aa28.02■■■□□ 2.08
SMIM11B-205ENST00000624304 MON2Q7Z3U7 1717 aa28.01■■■□□ 2.07
SMIM11B-205ENST00000624304 KTN1Q86UP2 1357 aaKnown RBP28■■■□□ 2.07
SMIM11B-205ENST00000624304 ERICH6BQ5W0A0 696 aa28■■■□□ 2.07
SMIM11B-205ENST00000624304 ORAI2Q96SN7 254 aa28■■■□□ 2.07
SMIM11B-205ENST00000624304 RBM19Q9Y4C8 960 aaKnown RBP28■■■□□ 2.07
SMIM11B-205ENST00000624304 ESCO1Q5FWF5 840 aa27.98■■■□□ 2.07
SMIM11B-205ENST00000624304 LTBP4Q8N2S1 1624 aa27.98■■■□□ 2.07
SMIM11B-205ENST00000624304 ATF3P18847 181 aa27.98■■■□□ 2.07
SMIM11B-205ENST00000624304 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.98■■■□□ 2.07
SMIM11B-205ENST00000624304 MSH6P52701 1360 aa27.97■■■□□ 2.07
SMIM11B-205ENST00000624304 CCDC184Q52MB2 194 aa27.97■■■□□ 2.07
SMIM11B-205ENST00000624304 NGDNQ8NEJ9 315 aaKnown RBP27.95■■■□□ 2.06
SMIM11B-205ENST00000624304 PARD3Q8TEW0 1356 aa27.95■■■□□ 2.06
SMIM11B-205ENST00000624304 MST1RQ04912 1400 aa27.94■■■□□ 2.06
SMIM11B-205ENST00000624304 C1orf167Q5SNV9 1468 aa27.94■■■□□ 2.06
SMIM11B-205ENST00000624304 PHF8Q9UPP1 1060 aa27.94■■■□□ 2.06
SMIM11B-205ENST00000624304 KIF20BQ96Q89 1820 aa27.93■■■□□ 2.06
SMIM11B-205ENST00000624304 GGNBP2Q9H3C7 697 aa27.93■■■□□ 2.06
SMIM11B-205ENST00000624304 CGNL1Q0VF96 1302 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms