RNA–Protein interactions for RNA: ENST00000623527.3

CDHR1-206, Transcript of cadherin related family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR1, Length 6,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-206ENST00000623527 RNF20Q5VTR2 975 aa13.13□□□□□ -0.31
CDHR1-206ENST00000623527 BRPF1P55201 1214 aaPredicted RBP13.13□□□□□ -0.31
CDHR1-206ENST00000623527 CAGE1Q8TC20 777 aa13.13□□□□□ -0.31
CDHR1-206ENST00000623527 CTDP1Q9Y5B0 961 aaPredicted RBP13.12□□□□□ -0.31
CDHR1-206ENST00000623527 EVA1CP58658 441 aa13.12□□□□□ -0.31
CDHR1-206ENST00000623527 WASHC4Q2M389 1173 aa13.12□□□□□ -0.31
CDHR1-206ENST00000623527 HOOK1Q9UJC3 728 aaKnown RBP13.12□□□□□ -0.31
CDHR1-206ENST00000623527 PRPF40AO75400 957 aaKnown RBP13.12□□□□□ -0.31
CDHR1-206ENST00000623527 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
CDHR1-206ENST00000623527 NOL10Q9BSC4 688 aaKnown RBP13.12□□□□□ -0.31
CDHR1-206ENST00000623527 USP47Q96K76 1375 aa13.11□□□□□ -0.31
CDHR1-206ENST00000623527 DIAPH1O60610 1272 aaKnown RBP13.11□□□□□ -0.31
CDHR1-206ENST00000623527 MRE11P49959 708 aa13.11□□□□□ -0.31
CDHR1-206ENST00000623527 OFD1O75665 1012 aa13.11□□□□□ -0.31
CDHR1-206ENST00000623527 SMC2O95347 1197 aa13.11□□□□□ -0.31
CDHR1-206ENST00000623527 AMOTL1Q8IY63 956 aa13.11□□□□□ -0.31
CDHR1-206ENST00000623527 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
CDHR1-206ENST00000623527 ERICH2A1L162 156 aa13.11□□□□□ -0.31
CDHR1-206ENST00000623527 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
CDHR1-206ENST00000623527 CHMP4CQ96CF2 233 aa13.1□□□□□ -0.31
CDHR1-206ENST00000623527 CDCA7LQ96GN5 454 aa13.1□□□□□ -0.31
CDHR1-206ENST00000623527 FIBPO43427 364 aa13.1□□□□□ -0.31
CDHR1-206ENST00000623527 ODF2Q5BJF6 829 aa13.1□□□□□ -0.31
CDHR1-206ENST00000623527 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.1□□□□□ -0.312e-6■■■■■ 149.1
CDHR1-206ENST00000623527 NOM1Q5C9Z4 860 aaKnown RBP13.09□□□□□ -0.31
CDHR1-206ENST00000623527 API5Q9BZZ5 524 aaKnown RBP13.09□□□□□ -0.31
CDHR1-206ENST00000623527 C1orf115Q9H7X2 142 aa13.09□□□□□ -0.31
CDHR1-206ENST00000623527 CCDC39Q9UFE4 941 aa13.09□□□□□ -0.31
CDHR1-206ENST00000623527 PDS5BQ9NTI5 1447 aa13.09□□□□□ -0.31
CDHR1-206ENST00000623527 LRRFIP1Q32MZ4 808 aaKnown RBP13.09□□□□□ -0.31
CDHR1-206ENST00000623527 RALYLQ86SE5 291 aaKnown RBP13.09□□□□□ -0.31
CDHR1-206ENST00000623527 SAFBQ15424 915 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDHR1-206ENST00000623527 TSPYL4Q9UJ04 414 aa13.09□□□□□ -0.31
CDHR1-206ENST00000623527 HSP90AB2PQ58FF8 381 aa13.09□□□□□ -0.31
CDHR1-206ENST00000623527 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
CDHR1-206ENST00000623527 NUTM2GQ5VZR2 741 aa13.08□□□□□ -0.32
CDHR1-206ENST00000623527 NEK4P51957 841 aa13.08□□□□□ -0.32
CDHR1-206ENST00000623527 TSPYL1Q9H0U9 437 aa13.08□□□□□ -0.32
CDHR1-206ENST00000623527 OLFM4Q6UX06 510 aa13.08□□□□□ -0.32
CDHR1-206ENST00000623527 FAM177A1Q8N128 213 aaPredicted RBP13.08□□□□□ -0.32
CDHR1-206ENST00000623527 ACBD3Q9H3P7 528 aa13.08□□□□□ -0.32
CDHR1-206ENST00000623527 CCDC144AA2RUR9 1427 aa13.07□□□□□ -0.32
CDHR1-206ENST00000623527 AXDND1Q5T1B0 1012 aaPredicted RBP13.07□□□□□ -0.32
CDHR1-206ENST00000623527 EPS15P42566 896 aa13.07□□□□□ -0.32
CDHR1-206ENST00000623527 HSP90AB3PQ58FF7 597 aa13.07□□□□□ -0.32
CDHR1-206ENST00000623527 FAM177BA6PVY3 158 aa13.07□□□□□ -0.32
CDHR1-206ENST00000623527 PKNOX2Q96KN3 472 aa13.07□□□□□ -0.32
CDHR1-206ENST00000623527 EVC2Q86UK5 1308 aa13.07□□□□□ -0.32
CDHR1-206ENST00000623527 CDR1P51861 262 aa13.06□□□□□ -0.32
CDHR1-206ENST00000623527 GGNBP2Q9H3C7 697 aa13.06□□□□□ -0.32
CDHR1-206ENST00000623527 CDC45O75419 566 aa13.05□□□□□ -0.32
CDHR1-206ENST00000623527 RIC3Q7Z5B4 369 aa13.05□□□□□ -0.32
CDHR1-206ENST00000623527 FSD1Q9BTV5 496 aa13.05□□□□□ -0.32
CDHR1-206ENST00000623527 CCDC191Q8NCU4 936 aa13.04□□□□□ -0.32
CDHR1-206ENST00000623527 DNAJC2Q99543 621 aaKnown RBP13.04□□□□□ -0.32
CDHR1-206ENST00000623527 DDX58O95786 925 aaKnown RBP13.04□□□□□ -0.32
CDHR1-206ENST00000623527 STK3Q13188 491 aa13.04□□□□□ -0.32
CDHR1-206ENST00000623527 RUNDC1Q96C34 613 aa13.04□□□□□ -0.32
CDHR1-206ENST00000623527 ERC2O15083 957 aa13.04□□□□□ -0.32
CDHR1-206ENST00000623527 NAT10Q9H0A0 1025 aaKnown RBP13.04□□□□□ -0.32
CDHR1-206ENST00000623527 TSPY26PQ9H489 355 aa13.03□□□□□ -0.32
CDHR1-206ENST00000623527 CARMIL2Q6F5E8 1435 aa13.03□□□□□ -0.32
CDHR1-206ENST00000623527 RDXP35241 583 aaKnown RBP13.03□□□□□ -0.32
CDHR1-206ENST00000623527 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
CDHR1-206ENST00000623527 ADAMTS8Q9UP79 889 aa13.03□□□□□ -0.32
CDHR1-206ENST00000623527 UBTFL1P0CB47 393 aaPredicted RBP13.03□□□□□ -0.32
CDHR1-206ENST00000623527 KINO60870 393 aaKnown RBP13.02□□□□□ -0.32
CDHR1-206ENST00000623527 SURF6O75683 361 aaKnown RBP13.02□□□□□ -0.32
CDHR1-206ENST00000623527 PDZRN3Q9UPQ7 1066 aa13.02□□□□□ -0.33
CDHR1-206ENST00000623527 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.02□□□□□ -0.33
CDHR1-206ENST00000623527 IKQ13123 557 aaPredicted RBP13.02□□□□□ -0.33
CDHR1-206ENST00000623527 MAP4K4O95819 1239 aaPredicted RBP13.02□□□□□ -0.33
CDHR1-206ENST00000623527 CCDC173Q0VFZ6 552 aa13.02□□□□□ -0.33
CDHR1-206ENST00000623527 WASHC2AQ641Q2 1341 aa13.01□□□□□ -0.33
CDHR1-206ENST00000623527 WIZO95785 1651 aa13.01□□□□□ -0.33
CDHR1-206ENST00000623527 CWC15Q9P013 229 aaKnown RBP13.01□□□□□ -0.33
CDHR1-206ENST00000623527 CT47B1P0C2W7 299 aaPredicted RBP13□□□□□ -0.33
CDHR1-206ENST00000623527 CENPHQ9H3R5 247 aa13□□□□□ -0.33
CDHR1-206ENST00000623527 CCDC184Q52MB2 194 aa13□□□□□ -0.33
CDHR1-206ENST00000623527 ERICH4A6NGS2 130 aa13□□□□□ -0.33
CDHR1-206ENST00000623527 KRI1Q8N9T8 703 aaKnown RBP13□□□□□ -0.33
CDHR1-206ENST00000623527 PSME1Q06323 249 aa13□□□□□ -0.33
CDHR1-206ENST00000623527 CCDC66A2RUB6 948 aa12.99□□□□□ -0.33
CDHR1-206ENST00000623527 NEFHP12036 1026 aa12.99□□□□□ -0.33
CDHR1-206ENST00000623527 FAM193AP78312 1265 aa12.99□□□□□ -0.33
CDHR1-206ENST00000623527 KIF7Q2M1P5 1343 aa12.99□□□□□ -0.33
CDHR1-206ENST00000623527 GNAI1P63096 354 aa12.99□□□□□ -0.33
CDHR1-206ENST00000623527 LEKR1Q6ZMV7 388 aa12.99□□□□□ -0.33
CDHR1-206ENST00000623527 DCTN1Q14203 1278 aa12.99□□□□□ -0.33
CDHR1-206ENST00000623527 ROCK1Q13464 1354 aa12.99□□□□□ -0.33
CDHR1-206ENST00000623527 AKNAQ7Z591 1439 aa12.99□□□□□ -0.33
CDHR1-206ENST00000623527 VGFO15240 615 aaPredicted RBP12.99□□□□□ -0.33
CDHR1-206ENST00000623527 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
CDHR1-206ENST00000623527 CABP2Q9NPB3 220 aa12.99□□□□□ -0.33
CDHR1-206ENST00000623527 SERPINC1P01008 464 aa12.98□□□□□ -0.33
CDHR1-206ENST00000623527 RBM33Q96EV2 1170 aaKnown RBP12.98□□□□□ -0.33
CDHR1-206ENST00000623527 BCAR3O75815 825 aa12.98□□□□□ -0.33
CDHR1-206ENST00000623527 ANKRD62A6NC57 917 aa12.98□□□□□ -0.33
CDHR1-206ENST00000623527 C11orf95C9JLR9 678 aaPredicted RBP12.98□□□□□ -0.33
CDHR1-206ENST00000623527 BRMS1Q9HCU9 246 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms