RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 TXNDC2Q86VQ3 553 aa9.66□□□□□ -0.86
CBWD3-219ENST00000622817 PLEKHG1Q9ULL1 1385 aa9.65□□□□□ -0.86
CBWD3-219ENST00000622817 ASXL1Q8IXJ9 1541 aa9.65□□□□□ -0.86
CBWD3-219ENST00000622817 SETD1BQ9UPS6 1966 aaKnown RBP9.65□□□□□ -0.86
CBWD3-219ENST00000622817 CEP170BQ9Y4F5 1589 aaPredicted RBP9.65□□□□□ -0.86
CBWD3-219ENST00000622817 YTHDC2Q9H6S0 1430 aaKnown RBP9.65□□□□□ -0.86
CBWD3-219ENST00000622817 BCANQ96GW7 911 aa9.65□□□□□ -0.86
CBWD3-219ENST00000622817 PTPRMP28827 1452 aa9.65□□□□□ -0.87
CBWD3-219ENST00000622817 LTKP29376 864 aa9.64□□□□□ -0.87
CBWD3-219ENST00000622817 STK26Q9P289 416 aa9.64□□□□□ -0.87
CBWD3-219ENST00000622817 NRXN3Q9Y4C0 1643 aa9.64□□□□□ -0.87
CBWD3-219ENST00000622817 LRPPRCP42704 1394 aaKnown RBP9.63□□□□□ -0.87
CBWD3-219ENST00000622817 ARHGEF28Q8N1W1 1705 aaKnown RBP9.62□□□□□ -0.87
CBWD3-219ENST00000622817 ZNF142P52746 1687 aaPredicted RBP9.62□□□□□ -0.87
CBWD3-219ENST00000622817 ABCC11Q96J66 1382 aa9.62□□□□□ -0.87
CBWD3-219ENST00000622817 SETD1AO15047 1707 aaKnown RBP9.62□□□□□ -0.87
CBWD3-219ENST00000622817 QRICH2Q9H0J4 1663 aa9.62□□□□□ -0.87
CBWD3-219ENST00000622817 POGKQ9P215 609 aa9.62□□□□□ -0.87
CBWD3-219ENST00000622817 DLC1Q96QB1 1528 aa9.61□□□□□ -0.87
CBWD3-219ENST00000622817 ADAMTS13Q76LX8 1427 aa9.61□□□□□ -0.87
CBWD3-219ENST00000622817 METP08581 1390 aa9.61□□□□□ -0.87
CBWD3-219ENST00000622817 CCER2I3L3R5 266 aa9.61□□□□□ -0.87
CBWD3-219ENST00000622817 PUS7Q96PZ0 661 aaKnown RBP9.61□□□□□ -0.87
CBWD3-219ENST00000622817 EVC2Q86UK5 1308 aa9.61□□□□□ -0.87
CBWD3-219ENST00000622817 ANKLE2Q86XL3 938 aa9.6□□□□□ -0.87
CBWD3-219ENST00000622817 SIRT1Q96EB6 747 aa9.6□□□□□ -0.87
CBWD3-219ENST00000622817 PRAM1Q96QH2 718 aa9.6□□□□□ -0.87
CBWD3-219ENST00000622817 SSUH2Q9Y2M2 353 aa9.6□□□□□ -0.87
CBWD3-219ENST00000622817 TBX22Q9Y458 520 aa9.6□□□□□ -0.87
CBWD3-219ENST00000622817 MED14O60244 1454 aa9.6□□□□□ -0.87
CBWD3-219ENST00000622817 DIP2AQ14689 1571 aa9.59□□□□□ -0.87
CBWD3-219ENST00000622817 TECPR2O15040 1411 aa9.59□□□□□ -0.87
CBWD3-219ENST00000622817 PRKRIP1Q9H875 184 aaPredicted RBP9.59□□□□□ -0.87
CBWD3-219ENST00000622817 PANK3Q9H999 370 aa9.59□□□□□ -0.87
CBWD3-219ENST00000622817 FAM135BQ49AJ0 1406 aa9.58□□□□□ -0.88
CBWD3-219ENST00000622817 SAFB2Q14151 953 aaKnown RBP eCLIP9.58□□□□□ -0.88
CBWD3-219ENST00000622817 PITPNM1O00562 1244 aa9.57□□□□□ -0.88
CBWD3-219ENST00000622817 SLC26A8Q96RN1 970 aa9.57□□□□□ -0.88
CBWD3-219ENST00000622817 KNDC1Q76NI1 1749 aa9.57□□□□□ -0.88
CBWD3-219ENST00000622817 PER1O15534 1290 aaPredicted RBP9.57□□□□□ -0.88
CBWD3-219ENST00000622817 MINK1Q8N4C8 1332 aaPredicted RBP9.57□□□□□ -0.88
CBWD3-219ENST00000622817 KTN1Q86UP2 1357 aaKnown RBP9.57□□□□□ -0.88
CBWD3-219ENST00000622817 CPS1P31327 1500 aa9.56□□□□□ -0.88
CBWD3-219ENST00000622817 TULP4Q9NRJ4 1543 aa9.56□□□□□ -0.88
CBWD3-219ENST00000622817 WAPLQ7Z5K2 1190 aa9.56□□□□□ -0.88
CBWD3-219ENST00000622817 ZNF692Q9BU19 519 aaPredicted RBP9.55□□□□□ -0.88
CBWD3-219ENST00000622817 KNSTRNQ9Y448 316 aa9.55□□□□□ -0.88
CBWD3-219ENST00000622817 PIK3R4Q99570 1358 aa9.55□□□□□ -0.88
CBWD3-219ENST00000622817 MYOM1P52179 1685 aa9.55□□□□□ -0.88
CBWD3-219ENST00000622817 KDM4FA0A1W2PPD8 638 aa9.55□□□□□ -0.88
CBWD3-219ENST00000622817 SRPK2P78362 688 aaKnown RBP9.55□□□□□ -0.88
CBWD3-219ENST00000622817 RALBP1Q15311 655 aa9.55□□□□□ -0.88
CBWD3-219ENST00000622817 PLEKHH1Q9ULM0 1364 aa9.55□□□□□ -0.88
CBWD3-219ENST00000622817 NINLQ9Y2I6 1382 aa9.55□□□□□ -0.88
CBWD3-219ENST00000622817 TMC1Q8TDI8 760 aa9.54□□□□□ -0.88
CBWD3-219ENST00000622817 AMOTL2Q9Y2J4 779 aa9.54□□□□□ -0.88
CBWD3-219ENST00000622817 ATAD2Q6PL18 1390 aa9.54□□□□□ -0.88
CBWD3-219ENST00000622817 ROBO2Q9HCK4 1378 aa9.54□□□□□ -0.88
CBWD3-219ENST00000622817 PTPRUQ92729 1446 aa9.53□□□□□ -0.88
CBWD3-219ENST00000622817 CDK19Q9BWU1 502 aa9.53□□□□□ -0.88
CBWD3-219ENST00000622817 CABP2Q9NPB3 220 aa9.53□□□□□ -0.88
CBWD3-219ENST00000622817 NPHP4O75161 1426 aaPredicted RBP9.53□□□□□ -0.88
CBWD3-219ENST00000622817 PTCH1Q13635 1447 aa9.53□□□□□ -0.88
CBWD3-219ENST00000622817 WASLO00401 505 aaPredicted RBP9.52□□□□□ -0.89
CBWD3-219ENST00000622817 SLC12A5Q9H2X9 1139 aa9.52□□□□□ -0.89
CBWD3-219ENST00000622817 PARD3Q8TEW0 1356 aa9.51□□□□□ -0.89
CBWD3-219ENST00000622817 NPC1L1Q9UHC9 1359 aa9.51□□□□□ -0.89
CBWD3-219ENST00000622817 CNGB1Q14028 1251 aaPredicted RBP9.51□□□□□ -0.89
CBWD3-219ENST00000622817 YTHDC1Q96MU7 727 aaKnown RBP9.51□□□□□ -0.89
CBWD3-219ENST00000622817 MYBBP1AQ9BQG0 1328 aaKnown RBP9.51□□□□□ -0.89
CBWD3-219ENST00000622817 NCKAP5LQ9HCH0 1330 aa9.51□□□□□ -0.89
CBWD3-219ENST00000622817 AMER1Q5JTC6 1135 aaPredicted RBP9.51□□□□□ -0.89
CBWD3-219ENST00000622817 XRN1Q8IZH2 1706 aaKnown RBP9.5□□□□□ -0.89
CBWD3-219ENST00000622817 ANKRD36BQ8N2N9 1353 aa9.5□□□□□ -0.89
CBWD3-219ENST00000622817 CC2D1BQ5T0F9 858 aaKnown RBP9.5□□□□□ -0.89
CBWD3-219ENST00000622817 CARD14Q9BXL6 1004 aa9.5□□□□□ -0.89
CBWD3-219ENST00000622817 TERF2IPQ9NYB0 399 aa9.5□□□□□ -0.89
CBWD3-219ENST00000622817 KCNA6P17658 529 aa9.49□□□□□ -0.89
CBWD3-219ENST00000622817 PIP4P2Q8N4L2 257 aa9.49□□□□□ -0.89
CBWD3-219ENST00000622817 MRS2Q9HD23 443 aa9.49□□□□□ -0.89
CBWD3-219ENST00000622817 ADGRB2O60241 1585 aa9.49□□□□□ -0.89
CBWD3-219ENST00000622817 CENPBP07199 599 aaPredicted RBP9.49□□□□□ -0.89
CBWD3-219ENST00000622817 HDGFL2Q7Z4V5 671 aaPredicted RBP9.48□□□□□ -0.89
CBWD3-219ENST00000622817 NLRP13Q86W25 1043 aa9.48□□□□□ -0.89
CBWD3-219ENST00000622817 NSD3Q9BZ95 1437 aa9.48□□□□□ -0.89
CBWD3-219ENST00000622817 CHD2O14647 1828 aaKnown RBP9.48□□□□□ -0.89
CBWD3-219ENST00000622817 BRD4O60885 1362 aaPredicted RBP9.48□□□□□ -0.89
CBWD3-219ENST00000622817 CGNL1Q0VF96 1302 aa9.47□□□□□ -0.89
CBWD3-219ENST00000622817 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.47□□□□□ -0.89
CBWD3-219ENST00000622817 FXR2P51116 673 aaKnown RBP eCLIP9.47□□□□□ -0.89
CBWD3-219ENST00000622817 NUDT16Q96DE0 195 aaKnown RBP9.47□□□□□ -0.89
CBWD3-219ENST00000622817 CABP1Q9NZU7 370 aa9.47□□□□□ -0.89
CBWD3-219ENST00000622817 CCDC184Q52MB2 194 aa9.47□□□□□ -0.89
CBWD3-219ENST00000622817 CCDC61Q9Y6R9 512 aa9.47□□□□□ -0.89
CBWD3-219ENST00000622817 A0A1W2PP64 1363 aa9.46□□□□□ -0.89
CBWD3-219ENST00000622817 USP32Q8NFA0 1604 aa9.46□□□□□ -0.9
CBWD3-219ENST00000622817 ATP7BP35670 1465 aa9.46□□□□□ -0.9
CBWD3-219ENST00000622817 HSPA2P54652 639 aa9.45□□□□□ -0.9
CBWD3-219ENST00000622817 SPDYE1Q8NFV5 336 aaPredicted RBP9.45□□□□□ -0.9
CBWD3-219ENST00000622817 NSD2O96028 1365 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms