RNA–Protein interactions for RNA: ENST00000622329.1

RNU6-538P-201, Transcript of RNA, U6 small nuclear 538, pseudogene, humanhuman

BASIC

Gene RNU6-538P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-538P-201ENST00000622329 AXIN1O15169 862 aa10.46□□□□□ -0.73
RNU6-538P-201ENST00000622329 CD46P15529 392 aa10.46□□□□□ -0.73
RNU6-538P-201ENST00000622329 WNT7AO00755 349 aa10.45□□□□□ -0.74
RNU6-538P-201ENST00000622329 CTC1Q2NKJ3 1217 aa10.45□□□□□ -0.74
RNU6-538P-201ENST00000622329 HLA-CQ95604 372 aa10.45□□□□□ -0.74
RNU6-538P-201ENST00000622329 PLCB2Q00722 1185 aa10.44□□□□□ -0.74
RNU6-538P-201ENST00000622329 NFX1Q12986 1120 aaKnown RBP10.44□□□□□ -0.74
RNU6-538P-201ENST00000622329 TRIM32Q13049 653 aa10.43□□□□□ -0.74
RNU6-538P-201ENST00000622329 GPIHBP1Q8IV16 184 aa10.43□□□□□ -0.74
RNU6-538P-201ENST00000622329 J3QL48 77 aa10.42□□□□□ -0.74
RNU6-538P-201ENST00000622329 DXOO77932 396 aaKnown RBP10.42□□□□□ -0.74
RNU6-538P-201ENST00000622329 MRGPRX2Q96LB1 330 aa10.42□□□□□ -0.74
RNU6-538P-201ENST00000622329 C11orf95C9JLR9 678 aaPredicted RBP10.4□□□□□ -0.74
RNU6-538P-201ENST00000622329 SNIP1Q8TAD8 396 aaKnown RBP10.4□□□□□ -0.74
RNU6-538P-201ENST00000622329 TTC24A2A3L6 582 aaPredicted RBP10.39□□□□□ -0.75
RNU6-538P-201ENST00000622329 SKOR1P84550 965 aa10.39□□□□□ -0.75
RNU6-538P-201ENST00000622329 ZBTB24O43167 697 aaPredicted RBP10.38□□□□□ -0.75
RNU6-538P-201ENST00000622329 WFS1O76024 890 aa10.38□□□□□ -0.75
RNU6-538P-201ENST00000622329 SNRPBP14678 240 aaKnown RBP10.38□□□□□ -0.75
RNU6-538P-201ENST00000622329 ATP13A2Q9NQ11 1180 aa10.38□□□□□ -0.75
RNU6-538P-201ENST00000622329 KDM2AQ9Y2K7 1162 aa10.38□□□□□ -0.75
RNU6-538P-201ENST00000622329 KDM4AO75164 1064 aa10.37□□□□□ -0.75
RNU6-538P-201ENST00000622329 PRKCSHP14314 528 aaPredicted RBP10.37□□□□□ -0.75
RNU6-538P-201ENST00000622329 MAP2K5Q13163 448 aa10.37□□□□□ -0.75
RNU6-538P-201ENST00000622329 HPS1Q92902 700 aa10.37□□□□□ -0.75
RNU6-538P-201ENST00000622329 USB1Q9BQ65 265 aaKnown RBP10.37□□□□□ -0.75
RNU6-538P-201ENST00000622329 Q3C1V9 767 aa10.36□□□□□ -0.75
RNU6-538P-201ENST00000622329 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
RNU6-538P-201ENST00000622329 GUCA2AQ02747 115 aa10.35□□□□□ -0.75
RNU6-538P-201ENST00000622329 IRF6O14896 467 aa10.34□□□□□ -0.75
RNU6-538P-201ENST00000622329 HOXA2O43364 376 aa10.34□□□□□ -0.75
RNU6-538P-201ENST00000622329 WIPF1O43516 503 aa10.34□□□□□ -0.75
RNU6-538P-201ENST00000622329 BCANQ96GW7 911 aa10.34□□□□□ -0.75
RNU6-538P-201ENST00000622329 MDM2Q00987 491 aaPredicted RBP10.33□□□□□ -0.76
RNU6-538P-201ENST00000622329 SYMPKQ92797 1274 aaKnown RBP10.32□□□□□ -0.76
RNU6-538P-201ENST00000622329 TRIM47Q96LD4 638 aa10.32□□□□□ -0.76
RNU6-538P-201ENST00000622329 RC3H1Q5TC82 1133 aaKnown RBP10.31□□□□□ -0.76
RNU6-538P-201ENST00000622329 PTCRAQ6ISU1 281 aaPredicted RBP10.3□□□□□ -0.76
RNU6-538P-201ENST00000622329 SIAH2O43255 324 aa10.28□□□□□ -0.76
RNU6-538P-201ENST00000622329 WNT7BP56706 349 aa10.28□□□□□ -0.76
RNU6-538P-201ENST00000622329 USP46P62068 366 aa10.28□□□□□ -0.76
RNU6-538P-201ENST00000622329 CCDC102AQ96A19 550 aa10.28□□□□□ -0.76
RNU6-538P-201ENST00000622329 TERTO14746 1132 aaKnown RBP10.27□□□□□ -0.77
RNU6-538P-201ENST00000622329 JUNDP17535 347 aa10.27□□□□□ -0.77
RNU6-538P-201ENST00000622329 CCDC24Q8N4L8 307 aa10.27□□□□□ -0.77
RNU6-538P-201ENST00000622329 REPIN1Q9BWE0 567 aaKnown RBP10.27□□□□□ -0.77
RNU6-538P-201ENST00000622329 FAM217BQ9NTX9 383 aaPredicted RBP10.27□□□□□ -0.77
RNU6-538P-201ENST00000622329 MINK1Q8N4C8 1332 aaPredicted RBP10.26□□□□□ -0.77
RNU6-538P-201ENST00000622329 PCDHGC3Q9UN70 934 aa10.25□□□□□ -0.77
RNU6-538P-201ENST00000622329 ARXQ96QS3 562 aa10.23□□□□□ -0.77
RNU6-538P-201ENST00000622329 TRIM46Q7Z4K8 759 aa10.22□□□□□ -0.77
RNU6-538P-201ENST00000622329 SENP2Q9HC62 589 aa10.22□□□□□ -0.77
RNU6-538P-201ENST00000622329 GPCPD1Q9NPB8 672 aa10.22□□□□□ -0.77
RNU6-538P-201ENST00000622329 STK17AQ9UEE5 414 aa10.22□□□□□ -0.77
RNU6-538P-201ENST00000622329 LORP23490 312 aaPredicted RBP10.21□□□□□ -0.77
RNU6-538P-201ENST00000622329 ALDH1A1P00352 501 aa10.2□□□□□ -0.78
RNU6-538P-201ENST00000622329 RETREG3Q86VR2 466 aa10.2□□□□□ -0.78
RNU6-538P-201ENST00000622329 NUDT12Q9BQG2 462 aa10.2□□□□□ -0.78
RNU6-538P-201ENST00000622329 HAP1P54257 671 aaPredicted RBP10.19□□□□□ -0.78
RNU6-538P-201ENST00000622329 BMP1P13497 986 aa10.18□□□□□ -0.78
RNU6-538P-201ENST00000622329 SH3BP2P78314 561 aa10.18□□□□□ -0.78
RNU6-538P-201ENST00000622329 KIFC2Q96AC6 838 aa10.18□□□□□ -0.78
RNU6-538P-201ENST00000622329 CLCN1P35523 988 aa10.17□□□□□ -0.78
RNU6-538P-201ENST00000622329 INSM1Q01101 510 aaPredicted RBP10.17□□□□□ -0.78
RNU6-538P-201ENST00000622329 FDX1P10109 184 aa10.14□□□□□ -0.79
RNU6-538P-201ENST00000622329 EHBP1Q8NDI1 1231 aa10.14□□□□□ -0.79
RNU6-538P-201ENST00000622329 NDUFV2P19404 249 aa10.13□□□□□ -0.79
RNU6-538P-201ENST00000622329 SPIRE2Q8WWL2 714 aa10.13□□□□□ -0.79
RNU6-538P-201ENST00000622329 CCNYL3P0C7X3 344 aa10.12□□□□□ -0.79
RNU6-538P-201ENST00000622329 NUTM1Q86Y26 1132 aa10.12□□□□□ -0.79
RNU6-538P-201ENST00000622329 NXF1Q9UBU9 619 aaKnown RBP10.12□□□□□ -0.79
RNU6-538P-201ENST00000622329 GMPRP36959 345 aa10.11□□□□□ -0.79
RNU6-538P-201ENST00000622329 UNC93B1Q9H1C4 597 aa10.11□□□□□ -0.79
RNU6-538P-201ENST00000622329 EVA1BQ9NVM1 165 aa10.11□□□□□ -0.79
RNU6-538P-201ENST00000622329 TLL2Q9Y6L7 1015 aa10.11□□□□□ -0.79
RNU6-538P-201ENST00000622329 MOXD2PA6NHM9 499 aa10.1□□□□□ -0.79
RNU6-538P-201ENST00000622329 C6orf229H3BNL8 230 aa10.1□□□□□ -0.79
RNU6-538P-201ENST00000622329 CAPN5O15484 640 aaPredicted RBP10.1□□□□□ -0.79
RNU6-538P-201ENST00000622329 MS4A1P11836 297 aa10.1□□□□□ -0.79
RNU6-538P-201ENST00000622329 PTPRNQ16849 979 aa10.1□□□□□ -0.79
RNU6-538P-201ENST00000622329 TPRNQ4KMQ1 711 aa10.1□□□□□ -0.79
RNU6-538P-201ENST00000622329 SSTR3P32745 418 aaPredicted RBP10.09□□□□□ -0.79
RNU6-538P-201ENST00000622329 VEGFBP49765 207 aa10.09□□□□□ -0.79
RNU6-538P-201ENST00000622329 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.09□□□□□ -0.79
RNU6-538P-201ENST00000622329 BAP1Q92560 729 aa10.09□□□□□ -0.79
RNU6-538P-201ENST00000622329 ERBB4Q15303 1308 aa10.08□□□□□ -0.8
RNU6-538P-201ENST00000622329 LINC01559Q495D7 138 aa10.08□□□□□ -0.8
RNU6-538P-201ENST00000622329 TIMELESSQ9UNS1 1208 aa10.08□□□□□ -0.8
RNU6-538P-201ENST00000622329 KCNH2Q12809 1159 aa10.07□□□□□ -0.8
RNU6-538P-201ENST00000622329 WASF2Q9Y6W5 498 aa10.07□□□□□ -0.8
RNU6-538P-201ENST00000622329 H3BM21 787 aa10.06□□□□□ -0.8
RNU6-538P-201ENST00000622329 ZFP42Q96MM3 310 aa10.06□□□□□ -0.8
RNU6-538P-201ENST00000622329 KLF16Q9BXK1 252 aaPredicted RBP10.06□□□□□ -0.8
RNU6-538P-201ENST00000622329 NPAS3Q8IXF0 933 aa10.05□□□□□ -0.8
RNU6-538P-201ENST00000622329 MPNDQ8N594 471 aa10.05□□□□□ -0.8
RNU6-538P-201ENST00000622329 ZNF511Q8NB15 262 aa10.05□□□□□ -0.8
RNU6-538P-201ENST00000622329 PRR7Q8TB68 274 aa10.05□□□□□ -0.8
RNU6-538P-201ENST00000622329 TIMP2P16035 220 aa10.03□□□□□ -0.8
RNU6-538P-201ENST00000622329 AMHR2Q16671 573 aa10.03□□□□□ -0.8
RNU6-538P-201ENST00000622329 DESI1Q6ICB0 168 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms