RNA–Protein interactions for RNA: ENST00000622142.5

PRDM11-206, Transcript of PR/SET domain 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM11, Length 10,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM11-206ENST00000622142 COG6Q9Y2V7 657 aa11.11□□□□□ -0.63
PRDM11-206ENST00000622142 CARMIL2Q6F5E8 1435 aa11.11□□□□□ -0.63
PRDM11-206ENST00000622142 IVLP07476 585 aa11.11□□□□□ -0.63
PRDM11-206ENST00000622142 CCDC47Q96A33 483 aaKnown RBP11.11□□□□□ -0.63
PRDM11-206ENST00000622142 ZMYND15Q9H091 742 aa11.11□□□□□ -0.63
PRDM11-206ENST00000622142 TUBB4BP68371 445 aa11.11□□□□□ -0.63
PRDM11-206ENST00000622142 API5Q9BZZ5 524 aaKnown RBP11.11□□□□□ -0.63
PRDM11-206ENST00000622142 CGNQ9P2M7 1197 aaKnown RBP11.11□□□□□ -0.63
PRDM11-206ENST00000622142 A0A0G2JS52 829 aa11.1□□□□□ -0.63
PRDM11-206ENST00000622142 FOXD1Q16676 465 aa11.1□□□□□ -0.63
PRDM11-206ENST00000622142 ANO2Q9NQ90 1003 aa11.1□□□□□ -0.63
PRDM11-206ENST00000622142 CECR2Q9BXF3 1484 aa11.1□□□□□ -0.63
PRDM11-206ENST00000622142 AK9Q5TCS8 1911 aa11.1□□□□□ -0.63
PRDM11-206ENST00000622142 KINO60870 393 aaKnown RBP11.1□□□□□ -0.63
PRDM11-206ENST00000622142 PRIMPOLQ96LW4 560 aa11.1□□□□□ -0.63
PRDM11-206ENST00000622142 KIAA1328Q86T90 577 aa11.1□□□□□ -0.63
PRDM11-206ENST00000622142 TRIM29Q14134 588 aa11.1□□□□□ -0.63
PRDM11-206ENST00000622142 AKNAQ7Z591 1439 aa11.09□□□□□ -0.63
PRDM11-206ENST00000622142 GBP2P32456 591 aaPredicted RBP11.09□□□□□ -0.63
PRDM11-206ENST00000622142 GBP3Q9H0R5 595 aa11.09□□□□□ -0.63
PRDM11-206ENST00000622142 AKAP17AQ02040 695 aaKnown RBP11.09□□□□□ -0.63
PRDM11-206ENST00000622142 MICALCLQ6ZW33 695 aa11.09□□□□□ -0.63
PRDM11-206ENST00000622142 VPS37CA5D8V6 355 aaPredicted RBP11.09□□□□□ -0.63
PRDM11-206ENST00000622142 RILPL2Q969X0 211 aa11.09□□□□□ -0.63
PRDM11-206ENST00000622142 PIP4K2AP48426 406 aaPredicted RBP11.08□□□□□ -0.64
PRDM11-206ENST00000622142 MAP9Q49MG5 647 aa11.08□□□□□ -0.64
PRDM11-206ENST00000622142 SMARCE1Q969G3 411 aa11.08□□□□□ -0.64
PRDM11-206ENST00000622142 FYCO1Q9BQS8 1478 aa11.08□□□□□ -0.64
PRDM11-206ENST00000622142 PANK3Q9H999 370 aa11.08□□□□□ -0.64
PRDM11-206ENST00000622142 WDR97A6NE52 1622 aa11.08□□□□□ -0.64
PRDM11-206ENST00000622142 MCM4P33991 863 aa11.08□□□□□ -0.64
PRDM11-206ENST00000622142 RSPH4AQ5TD94 716 aa11.08□□□□□ -0.64
PRDM11-206ENST00000622142 FGD6Q6ZV73 1430 aa11.07□□□□□ -0.64
PRDM11-206ENST00000622142 HS1BP3Q53T59 392 aa11.07□□□□□ -0.64
PRDM11-206ENST00000622142 HSP90AB3PQ58FF7 597 aa11.07□□□□□ -0.64
PRDM11-206ENST00000622142 CPLX1O14810 134 aa11.07□□□□□ -0.64
PRDM11-206ENST00000622142 NBPF1Q3BBV0 1214 aa11.07□□□□□ -0.64
PRDM11-206ENST00000622142 PAIP2Q9BPZ3 127 aaKnown RBP11.07□□□□□ -0.64
PRDM11-206ENST00000622142 ERC2O15083 957 aa11.07□□□□□ -0.64
PRDM11-206ENST00000622142 NPHP1O15259 732 aa11.07□□□□□ -0.64
PRDM11-206ENST00000622142 SH3BGRP55822 239 aaPredicted RBP11.07□□□□□ -0.64
PRDM11-206ENST00000622142 PDE3AQ14432 1141 aa11.07□□□□□ -0.64
PRDM11-206ENST00000622142 MYOM3Q5VTT5 1437 aa11.07□□□□□ -0.64
PRDM11-206ENST00000622142 CT47B1P0C2W7 299 aaPredicted RBP11.07□□□□□ -0.64
PRDM11-206ENST00000622142 PSMA5P28066 241 aa11.07□□□□□ -0.64
PRDM11-206ENST00000622142 RRBP1Q9P2E9 1410 aaKnown RBP11.06□□□□□ -0.64
PRDM11-206ENST00000622142 WASHC2AQ641Q2 1341 aa11.06□□□□□ -0.64
PRDM11-206ENST00000622142 WASHC2CQ9Y4E1 1318 aa11.06□□□□□ -0.64
PRDM11-206ENST00000622142 POLA1P09884 1462 aaPredicted RBP11.06□□□□□ -0.64
PRDM11-206ENST00000622142 PLEKHH1Q9ULM0 1364 aa11.06□□□□□ -0.64
PRDM11-206ENST00000622142 WDR33Q9C0J8 1336 aaKnown RBP11.06□□□□□ -0.64
PRDM11-206ENST00000622142 FOXD4L6Q3SYB3 417 aaPredicted RBP11.06□□□□□ -0.64
PRDM11-206ENST00000622142 FOXD4L3Q6VB84 417 aaPredicted RBP11.06□□□□□ -0.64
PRDM11-206ENST00000622142 CCDC91Q7Z6B0 441 aa11.06□□□□□ -0.64
PRDM11-206ENST00000622142 RNF214Q8ND24 703 aa11.06□□□□□ -0.64
PRDM11-206ENST00000622142 FHOD3Q2V2M9 1422 aa11.06□□□□□ -0.64
PRDM11-206ENST00000622142 SPATA24Q86W54 205 aa11.06□□□□□ -0.64
PRDM11-206ENST00000622142 SWAP70Q9UH65 585 aa11.06□□□□□ -0.64
PRDM11-206ENST00000622142 SYNE3Q6ZMZ3 975 aa11.06□□□□□ -0.64
PRDM11-206ENST00000622142 PCMTD1Q96MG8 357 aaPredicted RBP11.05□□□□□ -0.64
PRDM11-206ENST00000622142 ST20-MTHFSA0A0A6YYL1 179 aa11.05□□□□□ -0.64
PRDM11-206ENST00000622142 ERLIN2O94905 339 aa11.05□□□□□ -0.64
PRDM11-206ENST00000622142 SMC2O95347 1197 aa11.05□□□□□ -0.64
PRDM11-206ENST00000622142 CAVIN2O95810 425 aa11.05□□□□□ -0.64
PRDM11-206ENST00000622142 LUC7LQ9NQ29 371 aaKnown RBP11.05□□□□□ -0.64
PRDM11-206ENST00000622142 SLC4A10Q6U841 1118 aa11.05□□□□□ -0.64
PRDM11-206ENST00000622142 ZNF396Q96N95 335 aaPredicted RBP11.05□□□□□ -0.64
PRDM11-206ENST00000622142 LIG1P18858 919 aa11.05□□□□□ -0.64
PRDM11-206ENST00000622142 CBFA2T2O43439 604 aa11.05□□□□□ -0.64
PRDM11-206ENST00000622142 HSP90AB4PQ58FF6 505 aa11.05□□□□□ -0.64
PRDM11-206ENST00000622142 C11orf95C9JLR9 678 aaPredicted RBP11.05□□□□□ -0.64
PRDM11-206ENST00000622142 POTEB2H3BUK9 544 aa11.05□□□□□ -0.64
PRDM11-206ENST00000622142 RUNDC1Q96C34 613 aa11.04□□□□□ -0.64
PRDM11-206ENST00000622142 AEBP1Q8IUX7 1158 aa11.04□□□□□ -0.64
PRDM11-206ENST00000622142 SMAP1Q8IYB5 467 aaPredicted RBP11.04□□□□□ -0.64
PRDM11-206ENST00000622142 K7ELQ4 463 aaPredicted RBP11.04□□□□□ -0.64
PRDM11-206ENST00000622142 CHMP3Q9Y3E7 222 aa11.04□□□□□ -0.64
PRDM11-206ENST00000622142 SAFBQ15424 915 aaKnown RBP eCLIP11.04□□□□□ -0.64
PRDM11-206ENST00000622142 LRRC9Q6ZRR7 1453 aa11.04□□□□□ -0.64
PRDM11-206ENST00000622142 BBXQ8WY36 941 aaPredicted RBP11.04□□□□□ -0.64
PRDM11-206ENST00000622142 TUBB4AP04350 444 aa11.03□□□□□ -0.64
PRDM11-206ENST00000622142 HMGB1P1B2RPK0 211 aaPredicted RBP11.03□□□□□ -0.64
PRDM11-206ENST00000622142 MYO10Q9HD67 2058 aa11.03□□□□□ -0.64
PRDM11-206ENST00000622142 SHTN1A0MZ66 631 aa11.03□□□□□ -0.64
PRDM11-206ENST00000622142 EFCAB5A4FU69 1503 aa11.03□□□□□ -0.64
PRDM11-206ENST00000622142 CPSF2Q9P2I0 782 aaKnown RBP11.03□□□□□ -0.64
PRDM11-206ENST00000622142 V9GYY5 206 aaPredicted RBP11.03□□□□□ -0.64
PRDM11-206ENST00000622142 TERF1P54274 439 aa11.03□□□□□ -0.64
PRDM11-206ENST00000622142 SDF4Q9BRK5 362 aa11.02□□□□□ -0.64
PRDM11-206ENST00000622142 ERICH4A6NGS2 130 aa11.02□□□□□ -0.65
PRDM11-206ENST00000622142 PRPF40AO75400 957 aaKnown RBP11.02□□□□□ -0.65
PRDM11-206ENST00000622142 NEMFO60524 1076 aa11.02□□□□□ -0.65
PRDM11-206ENST00000622142 JMYQ8N9B5 988 aa11.02□□□□□ -0.65
PRDM11-206ENST00000622142 EHBP1L1Q8N3D4 1523 aa11.02□□□□□ -0.65
PRDM11-206ENST00000622142 PDILTQ8N807 584 aa11.02□□□□□ -0.65
PRDM11-206ENST00000622142 CLCN1P35523 988 aa11.01□□□□□ -0.65
PRDM11-206ENST00000622142 NAP1L1P55209 391 aaKnown RBP11.01□□□□□ -0.65
PRDM11-206ENST00000622142 KIF3BO15066 747 aa11.01□□□□□ -0.65
PRDM11-206ENST00000622142 FAM193AP78312 1265 aa11.01□□□□□ -0.65
PRDM11-206ENST00000622142 HIP1O00291 1037 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms