RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 KLHL34Q8N239 644 aa9.5□□□□□ -0.89
TRIM49B-202ENST00000622138 DYNC1I1O14576 645 aa9.49□□□□□ -0.89
TRIM49B-202ENST00000622138 NCBP3Q53F19 620 aaKnown RBP9.49□□□□□ -0.89
TRIM49B-202ENST00000622138 SCAPERQ9BY12 1400 aa9.49□□□□□ -0.89
TRIM49B-202ENST00000622138 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
TRIM49B-202ENST00000622138 TMEM51Q9NW97 253 aa9.48□□□□□ -0.89
TRIM49B-202ENST00000622138 SCAF11Q99590 1463 aaKnown RBP9.48□□□□□ -0.89
TRIM49B-202ENST00000622138 NLRP1Q9C000 1473 aa9.48□□□□□ -0.89
TRIM49B-202ENST00000622138 MCM4P33991 863 aa9.48□□□□□ -0.89
TRIM49B-202ENST00000622138 ZSCAN30Q86W11 494 aa9.48□□□□□ -0.89
TRIM49B-202ENST00000622138 ZNF521Q96K83 1311 aa9.48□□□□□ -0.89
TRIM49B-202ENST00000622138 DEPDC5O75140 1603 aa9.47□□□□□ -0.89
TRIM49B-202ENST00000622138 ASXL1Q8IXJ9 1541 aa9.47□□□□□ -0.89
TRIM49B-202ENST00000622138 CCDC173Q0VFZ6 552 aa9.47□□□□□ -0.89
TRIM49B-202ENST00000622138 DUSP27Q5VZP5 1158 aa9.47□□□□□ -0.89
TRIM49B-202ENST00000622138 FTSJ3Q8IY81 847 aaKnown RBP9.47□□□□□ -0.89
TRIM49B-202ENST00000622138 ANP32BQ92688 251 aaKnown RBP9.47□□□□□ -0.89
TRIM49B-202ENST00000622138 CCDC94Q9BW85 323 aaPredicted RBP9.47□□□□□ -0.89
TRIM49B-202ENST00000622138 FAM13BQ9NYF5 915 aa9.47□□□□□ -0.89
TRIM49B-202ENST00000622138 PTPRTO14522 1441 aa9.47□□□□□ -0.89
TRIM49B-202ENST00000622138 ZSCAN20P17040 1043 aaPredicted RBP9.47□□□□□ -0.89
TRIM49B-202ENST00000622138 EFCAB2Q5VUJ9 269 aa9.47□□□□□ -0.89
TRIM49B-202ENST00000622138 CLASP1Q7Z460 1538 aa9.46□□□□□ -0.89
TRIM49B-202ENST00000622138 UGGT1Q9NYU2 1555 aa9.46□□□□□ -0.89
TRIM49B-202ENST00000622138 AFAP1Q8N556 730 aa9.46□□□□□ -0.89
TRIM49B-202ENST00000622138 KNSTRNQ9Y448 316 aa9.46□□□□□ -0.89
TRIM49B-202ENST00000622138 DDX11L8A8MPP1 907 aa9.46□□□□□ -0.9
TRIM49B-202ENST00000622138 TET3O43151 1660 aa9.46□□□□□ -0.9
TRIM49B-202ENST00000622138 SPAG9O60271 1321 aaKnown RBP9.45□□□□□ -0.9
TRIM49B-202ENST00000622138 PIK3C2GO75747 1445 aa9.45□□□□□ -0.9
TRIM49B-202ENST00000622138 MSNP26038 577 aaKnown RBP9.45□□□□□ -0.9
TRIM49B-202ENST00000622138 CCDC146Q8IYE0 955 aa9.45□□□□□ -0.9
TRIM49B-202ENST00000622138 PPP1R9BQ96SB3 815 aa9.45□□□□□ -0.9
TRIM49B-202ENST00000622138 USP19O94966 1318 aa9.45□□□□□ -0.9
TRIM49B-202ENST00000622138 ABCA6Q8N139 1617 aa9.45□□□□□ -0.9
TRIM49B-202ENST00000622138 UHRF1BP1LA0JNW5 1464 aa9.45□□□□□ -0.9
TRIM49B-202ENST00000622138 TRAK2O60296 914 aa9.44□□□□□ -0.9
TRIM49B-202ENST00000622138 WDR43Q15061 677 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRIM49B-202ENST00000622138 TEX2Q8IWB9 1127 aa9.44□□□□□ -0.9
TRIM49B-202ENST00000622138 SLKQ9H2G2 1235 aaPredicted RBP9.44□□□□□ -0.9
TRIM49B-202ENST00000622138 SPINK5Q9NQ38 1064 aaPredicted RBP9.44□□□□□ -0.9
TRIM49B-202ENST00000622138 VWDEQ8N2E2 1590 aa9.44□□□□□ -0.9
TRIM49B-202ENST00000622138 KDM5AP29375 1690 aaKnown RBP9.44□□□□□ -0.9
TRIM49B-202ENST00000622138 INO80Q9ULG1 1556 aaPredicted RBP9.44□□□□□ -0.9
TRIM49B-202ENST00000622138 MROH1Q8NDA8 1641 aa9.44□□□□□ -0.9
TRIM49B-202ENST00000622138 UQCRHLA0A096LP55 91 aa9.44□□□□□ -0.9
TRIM49B-202ENST00000622138 UQCRHP07919 91 aa9.44□□□□□ -0.9
TRIM49B-202ENST00000622138 HS1BP3Q53T59 392 aa9.44□□□□□ -0.9
TRIM49B-202ENST00000622138 BRD2P25440 801 aaKnown RBP9.43□□□□□ -0.9
TRIM49B-202ENST00000622138 ERVK-7P63135 1459 aa9.43□□□□□ -0.9
TRIM49B-202ENST00000622138 PRDM10Q9NQV6 1147 aa9.43□□□□□ -0.9
TRIM49B-202ENST00000622138 DMRT2Q9Y5R5 561 aa9.43□□□□□ -0.9
TRIM49B-202ENST00000622138 ZMYM3Q14202 1370 aa9.43□□□□□ -0.9
TRIM49B-202ENST00000622138 RTEL1-TNFRSF6BF6WH68 1400 aa9.43□□□□□ -0.9
TRIM49B-202ENST00000622138 ATP7AQ04656 1500 aa9.42□□□□□ -0.9
TRIM49B-202ENST00000622138 MROH2AA6NES4 1674 aa9.42□□□□□ -0.9
TRIM49B-202ENST00000622138 KIAA1210Q9ULL0 1709 aa9.42□□□□□ -0.9
TRIM49B-202ENST00000622138 CHRM1P11229 460 aaPredicted RBP9.42□□□□□ -0.9
TRIM49B-202ENST00000622138 PTMSP20962 102 aa9.42□□□□□ -0.9
TRIM49B-202ENST00000622138 ARAP3Q8WWN8 1544 aa9.41□□□□□ -0.9
TRIM49B-202ENST00000622138 ZNF500O60304 480 aaPredicted RBP9.41□□□□□ -0.9
TRIM49B-202ENST00000622138 GOLGA2Q08379 1002 aa9.41□□□□□ -0.9
TRIM49B-202ENST00000622138 SLFN5Q08AF3 891 aa9.41□□□□□ -0.9
TRIM49B-202ENST00000622138 CSPP1Q1MSJ5 1256 aa9.41□□□□□ -0.9
TRIM49B-202ENST00000622138 ZNF830Q96NB3 372 aaPredicted RBP9.41□□□□□ -0.9
TRIM49B-202ENST00000622138 ABCA9Q8IUA7 1624 aa9.41□□□□□ -0.9
TRIM49B-202ENST00000622138 MAP3K4Q9Y6R4 1608 aa9.41□□□□□ -0.9
TRIM49B-202ENST00000622138 NPC1L1Q9UHC9 1359 aa9.41□□□□□ -0.9
TRIM49B-202ENST00000622138 ADGRF5Q8IZF2 1346 aa9.41□□□□□ -0.9
TRIM49B-202ENST00000622138 CFAP70Q5T0N1 1121 aa9.41□□□□□ -0.9
TRIM49B-202ENST00000622138 GZF1Q9H116 711 aaPredicted RBP9.41□□□□□ -0.9
TRIM49B-202ENST00000622138 R3HCC1Q9Y3T6 440 aaKnown RBP9.41□□□□□ -0.9
TRIM49B-202ENST00000622138 CDK11BP21127 795 aaKnown RBP9.4□□□□□ -0.9
TRIM49B-202ENST00000622138 TRMT2AQ8IZ69 625 aaKnown RBP9.4□□□□□ -0.9
TRIM49B-202ENST00000622138 CARD14Q9BXL6 1004 aa9.4□□□□□ -0.9
TRIM49B-202ENST00000622138 CHMP5Q9NZZ3 219 aa9.4□□□□□ -0.9
TRIM49B-202ENST00000622138 IFT172Q9UG01 1749 aa9.4□□□□□ -0.9
TRIM49B-202ENST00000622138 EIF3AQ14152 1382 aaKnown RBP9.4□□□□□ -0.9
TRIM49B-202ENST00000622138 APAF1O14727 1248 aa9.4□□□□□ -0.91
TRIM49B-202ENST00000622138 SLC20A2Q08357 652 aa9.4□□□□□ -0.91
TRIM49B-202ENST00000622138 MYOM2P54296 1465 aa9.39□□□□□ -0.91
TRIM49B-202ENST00000622138 IBTKQ9P2D0 1353 aaPredicted RBP9.39□□□□□ -0.91
TRIM49B-202ENST00000622138 CDCA8Q53HL2 280 aa9.39□□□□□ -0.91
TRIM49B-202ENST00000622138 SASS6Q6UVJ0 657 aa9.39□□□□□ -0.91
TRIM49B-202ENST00000622138 PPRC1Q5VV67 1664 aaKnown RBP9.39□□□□□ -0.91
TRIM49B-202ENST00000622138 BCAR3O75815 825 aa9.39□□□□□ -0.91
TRIM49B-202ENST00000622138 FANCAO15360 1455 aa9.38□□□□□ -0.91
TRIM49B-202ENST00000622138 NEURL4Q96JN8 1562 aa9.38□□□□□ -0.91
TRIM49B-202ENST00000622138 MAPK8IP3Q9UPT6 1336 aa9.38□□□□□ -0.91
TRIM49B-202ENST00000622138 EFCAB6Q5THR3 1501 aa9.38□□□□□ -0.91
TRIM49B-202ENST00000622138 NKTRP30414 1462 aaKnown RBP9.38□□□□□ -0.91
TRIM49B-202ENST00000622138 KIF3BO15066 747 aa9.38□□□□□ -0.91
TRIM49B-202ENST00000622138 SKOR2Q2VWA4 1001 aaPredicted RBP9.38□□□□□ -0.91
TRIM49B-202ENST00000622138 MYO3AQ8NEV4 1616 aa9.37□□□□□ -0.91
TRIM49B-202ENST00000622138 ZFP91Q96JP5 570 aaPredicted RBP9.37□□□□□ -0.91
TRIM49B-202ENST00000622138 SHPRHQ149N8 1683 aa9.37□□□□□ -0.91
TRIM49B-202ENST00000622138 MCM5P33992 734 aa9.37□□□□□ -0.91
TRIM49B-202ENST00000622138 UPF2Q9HAU5 1272 aaKnown RBP9.37□□□□□ -0.91
TRIM49B-202ENST00000622138 KANK1Q14678 1352 aa9.37□□□□□ -0.91
TRIM49B-202ENST00000622138 ADGRL1O94910 1474 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms