RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 NALCNQ8IZF0 1738 aa13.85□□□□□ -0.19
TARDBP-227ENST00000622057 RBM6P78332 1123 aaKnown RBP13.85□□□□□ -0.19
TARDBP-227ENST00000622057 NHSL1Q5SYE7 1610 aa13.85□□□□□ -0.19
TARDBP-227ENST00000622057 FOXO3O43524 673 aa13.84□□□□□ -0.19
TARDBP-227ENST00000622057 XPCQ01831 940 aaPredicted RBP13.83□□□□□ -0.2
TARDBP-227ENST00000622057 USP21Q9UK80 565 aa13.83□□□□□ -0.2
TARDBP-227ENST00000622057 ANKRD30BQ9BXX2 1392 aa13.83□□□□□ -0.2
TARDBP-227ENST00000622057 NPHP3Q7Z494 1330 aa13.82□□□□□ -0.2
TARDBP-227ENST00000622057 PPLO60437 1756 aa13.81□□□□□ -0.2
TARDBP-227ENST00000622057 LRPPRCP42704 1394 aaKnown RBP13.81□□□□□ -0.2
TARDBP-227ENST00000622057 SPATA31E1Q6ZUB1 1445 aa13.81□□□□□ -0.2
TARDBP-227ENST00000622057 PRAG1Q86YV5 1406 aa13.81□□□□□ -0.2
TARDBP-227ENST00000622057 TRPC5Q9UL62 973 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-227ENST00000622057 PLEKHH1Q9ULM0 1364 aa13.8□□□□□ -0.2
TARDBP-227ENST00000622057 CFAP70Q5T0N1 1121 aa13.79□□□□□ -0.2
TARDBP-227ENST00000622057 ABCC11Q96J66 1382 aa13.79□□□□□ -0.2
TARDBP-227ENST00000622057 FNBP4Q8N3X1 1017 aaPredicted RBP13.78□□□□□ -0.2
TARDBP-227ENST00000622057 C14orf93Q9H972 538 aaKnown RBP13.78□□□□□ -0.2
TARDBP-227ENST00000622057 ACIN1Q9UKV3 1341 aaKnown RBP13.78□□□□□ -0.2
TARDBP-227ENST00000622057 CDK12Q9NYV4 1490 aaPredicted RBP13.78□□□□□ -0.2
TARDBP-227ENST00000622057 RGS12O14924 1447 aa13.77□□□□□ -0.21
TARDBP-227ENST00000622057 SAFB2Q14151 953 aaKnown RBP eCLIP13.77□□□□□ -0.21
TARDBP-227ENST00000622057 YTHDC2Q9H6S0 1430 aaKnown RBP13.76□□□□□ -0.21
TARDBP-227ENST00000622057 KRT28Q7Z3Y7 464 aa13.76□□□□□ -0.21
TARDBP-227ENST00000622057 SIRT1Q96EB6 747 aa13.76□□□□□ -0.21
TARDBP-227ENST00000622057 TECPR2O15040 1411 aa13.75□□□□□ -0.21
TARDBP-227ENST00000622057 PIK3C2GO75747 1445 aa13.75□□□□□ -0.21
TARDBP-227ENST00000622057 DHX57Q6P158 1386 aaKnown RBP13.75□□□□□ -0.21
TARDBP-227ENST00000622057 PLEKHG5O94827 1062 aa13.75□□□□□ -0.21
TARDBP-227ENST00000622057 PRAM1Q96QH2 718 aa13.74□□□□□ -0.21
TARDBP-227ENST00000622057 POGKQ9P215 609 aa13.74□□□□□ -0.21
TARDBP-227ENST00000622057 LAMC1P11047 1609 aa13.74□□□□□ -0.21
TARDBP-227ENST00000622057 CDC42BPGQ6DT37 1551 aa13.74□□□□□ -0.21
TARDBP-227ENST00000622057 PHF8Q9UPP1 1060 aa13.73□□□□□ -0.21
TARDBP-227ENST00000622057 KDM2AQ9Y2K7 1162 aa13.73□□□□□ -0.21
TARDBP-227ENST00000622057 RAB3GAP2Q9H2M9 1393 aa13.72□□□□□ -0.21
TARDBP-227ENST00000622057 SPATA31A3Q5VYP0 1347 aa13.72□□□□□ -0.21
TARDBP-227ENST00000622057 HAP1P54257 671 aaPredicted RBP13.72□□□□□ -0.21
TARDBP-227ENST00000622057 PSME1Q06323 249 aa13.72□□□□□ -0.21
TARDBP-227ENST00000622057 LMOD2Q6P5Q4 547 aa13.72□□□□□ -0.21
TARDBP-227ENST00000622057 PXDNQ92626 1479 aa13.72□□□□□ -0.21
TARDBP-227ENST00000622057 GJD4Q96KN9 370 aaPredicted RBP13.71□□□□□ -0.21
TARDBP-227ENST00000622057 TRAK1Q9UPV9 953 aa13.71□□□□□ -0.21
TARDBP-227ENST00000622057 MYOM2P54296 1465 aa13.71□□□□□ -0.21
TARDBP-227ENST00000622057 PMFBP1Q8TBY8 1022 aa13.7□□□□□ -0.22
TARDBP-227ENST00000622057 CABLES1Q8TDN4 633 aa13.7□□□□□ -0.22
TARDBP-227ENST00000622057 DCAF11Q8TEB1 546 aa13.7□□□□□ -0.22
TARDBP-227ENST00000622057 ATRNO75882 1429 aa13.7□□□□□ -0.22
TARDBP-227ENST00000622057 ATAD2Q6PL18 1390 aa13.7□□□□□ -0.22
TARDBP-227ENST00000622057 UNC5CLQ8IV45 518 aa13.69□□□□□ -0.22
TARDBP-227ENST00000622057 IFT172Q9UG01 1749 aa13.69□□□□□ -0.22
TARDBP-227ENST00000622057 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
TARDBP-227ENST00000622057 BCL9LQ86UU0 1499 aa13.68□□□□□ -0.22
TARDBP-227ENST00000622057 HIRIP3Q9BW71 556 aaPredicted RBP13.68□□□□□ -0.22
TARDBP-227ENST00000622057 KNDC1Q76NI1 1749 aa13.66□□□□□ -0.22
TARDBP-227ENST00000622057 NRXN1Q9ULB1 1477 aa13.66□□□□□ -0.22
TARDBP-227ENST00000622057 MINK1Q8N4C8 1332 aaPredicted RBP13.65□□□□□ -0.22
TARDBP-227ENST00000622057 CCDC9Q9Y3X0 531 aaKnown RBP13.65□□□□□ -0.22
TARDBP-227ENST00000622057 FMN2Q9NZ56 1722 aa13.64□□□□□ -0.23
TARDBP-227ENST00000622057 TNS3Q68CZ2 1445 aa13.64□□□□□ -0.23
TARDBP-227ENST00000622057 CCDC125Q86Z20 511 aa13.63□□□□□ -0.23
TARDBP-227ENST00000622057 SBNO1A3KN83 1393 aa13.62□□□□□ -0.23
TARDBP-227ENST00000622057 FAM83GA6ND36 823 aa13.62□□□□□ -0.23
TARDBP-227ENST00000622057 WASLO00401 505 aaPredicted RBP13.62□□□□□ -0.23
TARDBP-227ENST00000622057 HRCP23327 699 aa13.62□□□□□ -0.23
TARDBP-227ENST00000622057 SLIT2O94813 1529 aa13.62□□□□□ -0.23
TARDBP-227ENST00000622057 KIF1AQ12756 1690 aa13.61□□□□□ -0.23
TARDBP-227ENST00000622057 VPS72Q15906 364 aa13.61□□□□□ -0.23
TARDBP-227ENST00000622057 SEPT12Q8IYM1 358 aa13.61□□□□□ -0.23
TARDBP-227ENST00000622057 NGDNQ8NEJ9 315 aaKnown RBP13.61□□□□□ -0.23
TARDBP-227ENST00000622057 STAC3Q96MF2 364 aa13.61□□□□□ -0.23
TARDBP-227ENST00000622057 ZRANB1Q9UGI0 708 aa13.61□□□□□ -0.23
TARDBP-227ENST00000622057 RALGAPBQ86X10 1494 aa13.61□□□□□ -0.23
TARDBP-227ENST00000622057 ARHGEF10O15013 1369 aa13.6□□□□□ -0.23
TARDBP-227ENST00000622057 GPRASP1Q5JY77 1395 aa13.6□□□□□ -0.23
TARDBP-227ENST00000622057 PAK3O75914 559 aaPredicted RBP13.6□□□□□ -0.23
TARDBP-227ENST00000622057 PRR36Q9H6K5 1346 aa13.6□□□□□ -0.23
TARDBP-227ENST00000622057 DLC1Q96QB1 1528 aa13.59□□□□□ -0.23
TARDBP-227ENST00000622057 ANKARQ7Z5J8 1434 aa13.59□□□□□ -0.23
TARDBP-227ENST00000622057 RGPD8O14715 1765 aaPredicted RBP13.59□□□□□ -0.23
TARDBP-227ENST00000622057 A0A0G2JS52 829 aa13.59□□□□□ -0.23
TARDBP-227ENST00000622057 MYT1Q01538 1121 aa13.59□□□□□ -0.23
TARDBP-227ENST00000622057 BTG4Q9NY30 223 aa13.58□□□□□ -0.24
TARDBP-227ENST00000622057 MARF1Q9Y4F3 1742 aaKnown RBP13.58□□□□□ -0.24
TARDBP-227ENST00000622057 ADGRB1O14514 1584 aa13.58□□□□□ -0.24
TARDBP-227ENST00000622057 SF3B2Q13435 895 aaKnown RBP13.57□□□□□ -0.24
TARDBP-227ENST00000622057 EIF3AQ14152 1382 aaKnown RBP13.57□□□□□ -0.24
TARDBP-227ENST00000622057 USP32Q8NFA0 1604 aa13.57□□□□□ -0.24
TARDBP-227ENST00000622057 ONECUT3O60422 494 aaPredicted RBP13.56□□□□□ -0.24
TARDBP-227ENST00000622057 KRT27Q7Z3Y8 459 aa13.56□□□□□ -0.24
TARDBP-227ENST00000622057 NUDT16Q96DE0 195 aaKnown RBP13.56□□□□□ -0.24
TARDBP-227ENST00000622057 GLI3P10071 1580 aa13.56□□□□□ -0.24
TARDBP-227ENST00000622057 FAM98CQ17RN3 349 aaKnown RBP13.55□□□□□ -0.24
TARDBP-227ENST00000622057 DEFB132Q7Z7B7 95 aa13.55□□□□□ -0.24
TARDBP-227ENST00000622057 CDK19Q9BWU1 502 aa13.55□□□□□ -0.24
TARDBP-227ENST00000622057 BLMP54132 1417 aaPredicted RBP13.53□□□□□ -0.24
TARDBP-227ENST00000622057 NBPF1Q3BBV0 1214 aa13.52□□□□□ -0.25
TARDBP-227ENST00000622057 NUTM2GQ5VZR2 741 aa13.52□□□□□ -0.25
TARDBP-227ENST00000622057 TULP4Q9NRJ4 1543 aa13.52□□□□□ -0.25
TARDBP-227ENST00000622057 ADGRB2O60241 1585 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms