RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-231ENST00000622045 MAST1Q9Y2H9 1570 aa18.19■□□□□ 0.5
SYNRG-231ENST00000622045 ADGRF5Q8IZF2 1346 aa18.19■□□□□ 0.5
SYNRG-231ENST00000622045 CHMP5Q9NZZ3 219 aa18.19■□□□□ 0.5
SYNRG-231ENST00000622045 FTSJ3Q8IY81 847 aaKnown RBP18.19■□□□□ 0.5
SYNRG-231ENST00000622045 NLRP1Q9C000 1473 aa18.18■□□□□ 0.5
SYNRG-231ENST00000622045 CFAP53Q96M91 514 aa18.18■□□□□ 0.5
SYNRG-231ENST00000622045 SLC12A5Q9H2X9 1139 aa18.18■□□□□ 0.5
SYNRG-231ENST00000622045 RLBP1P12271 317 aa18.17■□□□□ 0.5
SYNRG-231ENST00000622045 SYNMO15061 1565 aa18.17■□□□□ 0.5
SYNRG-231ENST00000622045 NINLQ9Y2I6 1382 aa18.16■□□□□ 0.5
SYNRG-231ENST00000622045 C22orf23Q9BZE7 217 aa18.16■□□□□ 0.5
SYNRG-231ENST00000622045 SCAPERQ9BY12 1400 aa18.16■□□□□ 0.5
SYNRG-231ENST00000622045 U2AF1L5P0DN76 240 aaPredicted RBP18.15■□□□□ 0.5
SYNRG-231ENST00000622045 MTHFSP49914 203 aa18.15■□□□□ 0.5
SYNRG-231ENST00000622045 U2AF1Q01081 240 aaKnown RBP eCLIP18.15■□□□□ 0.5
SYNRG-231ENST00000622045 PLCH2O75038 1416 aa18.15■□□□□ 0.5
SYNRG-231ENST00000622045 FOXD4L1Q9NU39 408 aa18.15■□□□□ 0.5
SYNRG-231ENST00000622045 ABCC2Q92887 1545 aa18.14■□□□□ 0.49
SYNRG-231ENST00000622045 PLXNC1O60486 1568 aa18.13■□□□□ 0.49
SYNRG-231ENST00000622045 CLASP1Q7Z460 1538 aa18.13■□□□□ 0.49
SYNRG-231ENST00000622045 GAS2L3Q86XJ1 694 aa18.12■□□□□ 0.49
SYNRG-231ENST00000622045 MADDQ8WXG6 1647 aa18.12■□□□□ 0.49
SYNRG-231ENST00000622045 AAMPQ13685 434 aa18.12■□□□□ 0.49
SYNRG-231ENST00000622045 POLR3AO14802 1390 aaPredicted RBP18.12■□□□□ 0.49
SYNRG-231ENST00000622045 HSCBQ8IWL3 235 aa18.12■□□□□ 0.49
SYNRG-231ENST00000622045 WDR63Q8IWG1 891 aa18.11■□□□□ 0.49
SYNRG-231ENST00000622045 RNF17Q9BXT8 1623 aaKnown RBP18.11■□□□□ 0.49
SYNRG-231ENST00000622045 NSD3Q9BZ95 1437 aa18.11■□□□□ 0.49
SYNRG-231ENST00000622045 TMEM132EQ6IEE7 984 aa18.1■□□□□ 0.49
SYNRG-231ENST00000622045 ZKSCAN2Q63HK3 967 aa18.1■□□□□ 0.49
SYNRG-231ENST00000622045 RBM10P98175 930 aaKnown RBP18.09■□□□□ 0.49
SYNRG-231ENST00000622045 ARID3AQ99856 593 aa18.09■□□□□ 0.49
SYNRG-231ENST00000622045 SENP3Q9H4L4 574 aaPredicted RBP18.09■□□□□ 0.49
SYNRG-231ENST00000622045 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
SYNRG-231ENST00000622045 DZIP1LQ8IYY4 767 aaKnown RBP18.09■□□□□ 0.49
SYNRG-231ENST00000622045 SMC4Q9NTJ3 1288 aa18.09■□□□□ 0.49
SYNRG-231ENST00000622045 DDX11L8A8MPP1 907 aa18.08■□□□□ 0.49
SYNRG-231ENST00000622045 ERVK-7P63135 1459 aa18.08■□□□□ 0.48
SYNRG-231ENST00000622045 KIAA1211Q6ZU35 1233 aa18.08■□□□□ 0.48
SYNRG-231ENST00000622045 ITPRIPQ8IWB1 547 aa18.08■□□□□ 0.48
SYNRG-231ENST00000622045 IQGAP1P46940 1657 aa18.07■□□□□ 0.48
SYNRG-231ENST00000622045 MVPQ14764 893 aaKnown RBP18.07■□□□□ 0.48
SYNRG-231ENST00000622045 TSR2Q969E8 191 aaKnown RBP18.07■□□□□ 0.48
SYNRG-231ENST00000622045 PTPRTO14522 1441 aa18.06■□□□□ 0.48
SYNRG-231ENST00000622045 TRPM2O94759 1503 aa18.06■□□□□ 0.48
SYNRG-231ENST00000622045 SAFB2Q14151 953 aaKnown RBP eCLIP18.05■□□□□ 0.48
SYNRG-231ENST00000622045 TNPO1Q92973 898 aaKnown RBP18.05■□□□□ 0.48
SYNRG-231ENST00000622045 KDM5AP29375 1690 aaKnown RBP18.05■□□□□ 0.48
SYNRG-231ENST00000622045 HSP90AB1P08238 724 aaKnown RBP18.04■□□□□ 0.48
SYNRG-231ENST00000622045 NUTM2DQ5VT03 806 aaPredicted RBP18.04■□□□□ 0.48
SYNRG-231ENST00000622045 EXOSC9Q06265 439 aaKnown RBP18.02■□□□□ 0.48
SYNRG-231ENST00000622045 CLTCL1P53675 1640 aa18.02■□□□□ 0.48
SYNRG-231ENST00000622045 GGT6Q6P531 493 aa18.02■□□□□ 0.47
SYNRG-231ENST00000622045 TPM2P07951 284 aa18.01■□□□□ 0.47
SYNRG-231ENST00000622045 ZNF692Q9BU19 519 aaPredicted RBP18.01■□□□□ 0.47
SYNRG-231ENST00000622045 RTEL1-TNFRSF6BF6WH68 1400 aa18■□□□□ 0.47
SYNRG-231ENST00000622045 CCDC27Q2M243 656 aa17.99■□□□□ 0.47
SYNRG-231ENST00000622045 FAM13BQ9NYF5 915 aa17.99■□□□□ 0.47
SYNRG-231ENST00000622045 VIRMAQ69YN4 1812 aaKnown RBP17.99■□□□□ 0.47
SYNRG-231ENST00000622045 PDCL3Q9H2J4 239 aa17.99■□□□□ 0.47
SYNRG-231ENST00000622045 DDX19BQ9UMR2 479 aa17.99■□□□□ 0.47
SYNRG-231ENST00000622045 UGGT1Q9NYU2 1555 aa17.99■□□□□ 0.47
SYNRG-231ENST00000622045 ABCC1P33527 1531 aa17.99■□□□□ 0.47
SYNRG-231ENST00000622045 NOS1P29475 1434 aa17.98■□□□□ 0.47
SYNRG-231ENST00000622045 SPHKAPQ2M3C7 1700 aa17.98■□□□□ 0.47
SYNRG-231ENST00000622045 GBP4Q96PP9 640 aa17.98■□□□□ 0.47
SYNRG-231ENST00000622045 PHF23Q9BUL5 403 aaPredicted RBP17.98■□□□□ 0.47
SYNRG-231ENST00000622045 MYOM1P52179 1685 aa17.98■□□□□ 0.47
SYNRG-231ENST00000622045 TRIM27P14373 513 aa17.98■□□□□ 0.47
SYNRG-231ENST00000622045 SSH1Q8WYL5 1049 aa17.98■□□□□ 0.47
SYNRG-231ENST00000622045 CABP2Q9NPB3 220 aa17.98■□□□□ 0.47
SYNRG-231ENST00000622045 ERCC6L2Q5T890 1561 aa17.97■□□□□ 0.47
SYNRG-231ENST00000622045 NCLP19338 710 aaKnown RBP17.97■□□□□ 0.47
SYNRG-231ENST00000622045 NASPP49321 788 aaPredicted RBP17.97■□□□□ 0.47
SYNRG-231ENST00000622045 NOB1Q9ULX3 412 aaKnown RBP17.97■□□□□ 0.47
SYNRG-231ENST00000622045 R3HCC1Q9Y3T6 440 aaKnown RBP17.96■□□□□ 0.47
SYNRG-231ENST00000622045 EVC2Q86UK5 1308 aa17.96■□□□□ 0.47
SYNRG-231ENST00000622045 ATF7IPQ6VMQ6 1270 aa17.96■□□□□ 0.47
SYNRG-231ENST00000622045 MSNP26038 577 aaKnown RBP17.96■□□□□ 0.46
SYNRG-231ENST00000622045 SRPK2P78362 688 aaKnown RBP17.96■□□□□ 0.46
SYNRG-231ENST00000622045 ANP32BQ92688 251 aaKnown RBP17.96■□□□□ 0.46
SYNRG-231ENST00000622045 LNPKQ9C0E8 428 aa17.95■□□□□ 0.46
SYNRG-231ENST00000622045 GGNBP2Q9H3C7 697 aa17.95■□□□□ 0.46
SYNRG-231ENST00000622045 C14orf93Q9H972 538 aaKnown RBP17.95■□□□□ 0.46
SYNRG-231ENST00000622045 STK26Q9P289 416 aa17.95■□□□□ 0.46
SYNRG-231ENST00000622045 ZBTB7CA1YPR0 619 aa17.94■□□□□ 0.46
SYNRG-231ENST00000622045 IPO8O15397 1037 aaKnown RBP17.94■□□□□ 0.46
SYNRG-231ENST00000622045 SSFA2P28290 1259 aa17.94■□□□□ 0.46
SYNRG-231ENST00000622045 TMPOP42166 694 aaKnown RBP17.93■□□□□ 0.46
SYNRG-231ENST00000622045 TMEM57Q8N5G2 664 aa17.93■□□□□ 0.46
SYNRG-231ENST00000622045 ISY1Q9ULR0 285 aaKnown RBP17.93■□□□□ 0.46
SYNRG-231ENST00000622045 SBNO2Q9Y2G9 1366 aa17.93■□□□□ 0.46
SYNRG-231ENST00000622045 RIPK4P57078 832 aa17.93■□□□□ 0.46
SYNRG-231ENST00000622045 CEP152O94986 1710 aa17.93■□□□□ 0.46
SYNRG-231ENST00000622045 ZSCAN30Q86W11 494 aa17.93■□□□□ 0.46
SYNRG-231ENST00000622045 RBM42Q9BTD8 480 aaKnown RBP17.93■□□□□ 0.46
SYNRG-231ENST00000622045 DDX49Q9Y6V7 483 aaKnown RBP17.93■□□□□ 0.46
SYNRG-231ENST00000622045 CD2BP2O95400 341 aaKnown RBP17.92■□□□□ 0.46
SYNRG-231ENST00000622045 CT47B1P0C2W7 299 aaPredicted RBP17.92■□□□□ 0.46
SYNRG-231ENST00000622045 HDAC1Q13547 482 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms