RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 RWDD1Q9H446 243 aaPredicted RBP20.08■□□□□ 0.81
NPHP4-211ENST00000622020 POLR3AO14802 1390 aaPredicted RBP20.08■□□□□ 0.8
NPHP4-211ENST00000622020 STAC3Q96MF2 364 aa20.08■□□□□ 0.8
NPHP4-211ENST00000622020 TBC1D32Q96NH3 1257 aa20.07■□□□□ 0.8
NPHP4-211ENST00000622020 ABCC1P33527 1531 aa20.07■□□□□ 0.8
NPHP4-211ENST00000622020 CABP2Q9NPB3 220 aa20.07■□□□□ 0.8
NPHP4-211ENST00000622020 SPHKAPQ2M3C7 1700 aa20.07■□□□□ 0.8
NPHP4-211ENST00000622020 NOS1P29475 1434 aa20.06■□□□□ 0.8
NPHP4-211ENST00000622020 ITPRIPQ8IWB1 547 aa20.06■□□□□ 0.8
NPHP4-211ENST00000622020 UBE2Q2Q8WVN8 375 aa20.06■□□□□ 0.8
NPHP4-211ENST00000622020 SMC4Q9NTJ3 1288 aa20.06■□□□□ 0.8
NPHP4-211ENST00000622020 CFAP53Q96M91 514 aa20.06■□□□□ 0.8
NPHP4-211ENST00000622020 CHD1O14646 1710 aa20.05■□□□□ 0.8
NPHP4-211ENST00000622020 ANTXR1Q9H6X2 564 aa20.05■□□□□ 0.8
NPHP4-211ENST00000622020 EXOSC9Q06265 439 aaKnown RBP20.05■□□□□ 0.8
NPHP4-211ENST00000622020 STK26Q9P289 416 aa20.05■□□□□ 0.8
NPHP4-211ENST00000622020 CFAP65Q6ZU64 1925 aaKnown RBP20.04■□□□□ 0.8
NPHP4-211ENST00000622020 MVPQ14764 893 aaKnown RBP20.03■□□□□ 0.8
NPHP4-211ENST00000622020 DZIP1LQ8IYY4 767 aaKnown RBP20.03■□□□□ 0.8
NPHP4-211ENST00000622020 ZKSCAN2Q63HK3 967 aa20.03■□□□□ 0.8
NPHP4-211ENST00000622020 NGEFQ8N5V2 710 aa20.03■□□□□ 0.8
NPHP4-211ENST00000622020 GGNBP2Q9H3C7 697 aa20.02■□□□□ 0.8
NPHP4-211ENST00000622020 CEP152O94986 1710 aa20.02■□□□□ 0.8
NPHP4-211ENST00000622020 WDR63Q8IWG1 891 aa20.02■□□□□ 0.8
NPHP4-211ENST00000622020 MYH16Q9H6N6 1097 aa20.02■□□□□ 0.8
NPHP4-211ENST00000622020 NLRP1Q9C000 1473 aa20.01■□□□□ 0.79
NPHP4-211ENST00000622020 C22orf23Q9BZE7 217 aa20.01■□□□□ 0.79
NPHP4-211ENST00000622020 SLC24A1O60721 1099 aa20■□□□□ 0.79
NPHP4-211ENST00000622020 PANK2Q9BZ23 570 aa20■□□□□ 0.79
NPHP4-211ENST00000622020 ZFYVE16Q7Z3T8 1539 aa20■□□□□ 0.79
NPHP4-211ENST00000622020 TRIM27P14373 513 aa20■□□□□ 0.79
NPHP4-211ENST00000622020 ABCA6Q8N139 1617 aa19.99■□□□□ 0.79
NPHP4-211ENST00000622020 SSH1Q8WYL5 1049 aa19.99■□□□□ 0.79
NPHP4-211ENST00000622020 RRAGDQ9NQL2 400 aaPredicted RBP19.99■□□□□ 0.79
NPHP4-211ENST00000622020 NINLQ9Y2I6 1382 aa19.99■□□□□ 0.79
NPHP4-211ENST00000622020 ZCCHC11Q5TAX3 1644 aaKnown RBP19.98■□□□□ 0.79
NPHP4-211ENST00000622020 NOB1Q9ULX3 412 aaKnown RBP19.98■□□□□ 0.79
NPHP4-211ENST00000622020 FAM43AQ8N2R8 423 aa19.97■□□□□ 0.79
NPHP4-211ENST00000622020 FBLN1P23142 703 aa19.97■□□□□ 0.79
NPHP4-211ENST00000622020 PHF23Q9BUL5 403 aaPredicted RBP19.97■□□□□ 0.79
NPHP4-211ENST00000622020 FOXD4L1Q9NU39 408 aa19.97■□□□□ 0.79
NPHP4-211ENST00000622020 FANCAO15360 1455 aa19.97■□□□□ 0.79
NPHP4-211ENST00000622020 SRPK2P78362 688 aaKnown RBP19.96■□□□□ 0.79
NPHP4-211ENST00000622020 LNPKQ9C0E8 428 aa19.96■□□□□ 0.79
NPHP4-211ENST00000622020 MAP3K4Q9Y6R4 1608 aa19.95■□□□□ 0.78
NPHP4-211ENST00000622020 RTEL1-TNFRSF6BF6WH68 1400 aa19.95■□□□□ 0.78
NPHP4-211ENST00000622020 C14orf93Q9H972 538 aaKnown RBP19.95■□□□□ 0.78
NPHP4-211ENST00000622020 XRCC6P12956 609 aaKnown RBP eCLIP19.94■□□□□ 0.78
NPHP4-211ENST00000622020 MCM4P33991 863 aa19.94■□□□□ 0.78
NPHP4-211ENST00000622020 TMEM57Q8N5G2 664 aa19.94■□□□□ 0.78
NPHP4-211ENST00000622020 ATP7AQ04656 1500 aa19.93■□□□□ 0.78
NPHP4-211ENST00000622020 GOLGA6L3A6NEY3 463 aa19.93■□□□□ 0.78
NPHP4-211ENST00000622020 ADGRL1O94910 1474 aa19.92■□□□□ 0.78
NPHP4-211ENST00000622020 TET3O43151 1660 aa19.92■□□□□ 0.78
NPHP4-211ENST00000622020 TMPOP42166 694 aaKnown RBP19.92■□□□□ 0.78
NPHP4-211ENST00000622020 RIPK4P57078 832 aa19.92■□□□□ 0.78
NPHP4-211ENST00000622020 ELL2O00472 640 aaPredicted RBP19.91■□□□□ 0.78
NPHP4-211ENST00000622020 L1TD1Q5T7N2 865 aaKnown RBP19.91■□□□□ 0.78
NPHP4-211ENST00000622020 C1orf115Q9H7X2 142 aa19.91■□□□□ 0.78
NPHP4-211ENST00000622020 ATF7IPQ6VMQ6 1270 aa19.91■□□□□ 0.78
NPHP4-211ENST00000622020 TRAK2O60296 914 aa19.9■□□□□ 0.78
NPHP4-211ENST00000622020 TRIM35Q9UPQ4 493 aa19.9■□□□□ 0.78
NPHP4-211ENST00000622020 EVC2Q86UK5 1308 aa19.9■□□□□ 0.78
NPHP4-211ENST00000622020 ZNF518AQ6AHZ1 1483 aa19.9■□□□□ 0.78
NPHP4-211ENST00000622020 CCDC27Q2M243 656 aa19.89■□□□□ 0.78
NPHP4-211ENST00000622020 MINK1Q8N4C8 1332 aaPredicted RBP19.89■□□□□ 0.77
NPHP4-211ENST00000622020 SHPRHQ149N8 1683 aa19.89■□□□□ 0.77
NPHP4-211ENST00000622020 HSCBQ8IWL3 235 aa19.89■□□□□ 0.77
NPHP4-211ENST00000622020 IQSEC2Q5JU85 1478 aa19.89■□□□□ 0.77
NPHP4-211ENST00000622020 MYOM2P54296 1465 aa19.88■□□□□ 0.77
NPHP4-211ENST00000622020 CHMP5Q9NZZ3 219 aa19.88■□□□□ 0.77
NPHP4-211ENST00000622020 DDX19BQ9UMR2 479 aa19.88■□□□□ 0.77
NPHP4-211ENST00000622020 THUMPD2Q9BTF0 503 aaKnown RBP19.87■□□□□ 0.77
NPHP4-211ENST00000622020 VIRMAQ69YN4 1812 aaKnown RBP19.87■□□□□ 0.77
NPHP4-211ENST00000622020 SHROOM2Q13796 1616 aa19.87■□□□□ 0.77
NPHP4-211ENST00000622020 MROH2AA6NES4 1674 aa19.87■□□□□ 0.77
NPHP4-211ENST00000622020 AAMPQ13685 434 aa19.86■□□□□ 0.77
NPHP4-211ENST00000622020 SBNO2Q9Y2G9 1366 aa19.85■□□□□ 0.77
NPHP4-211ENST00000622020 KIF1BO60333 1816 aa19.84■□□□□ 0.77
NPHP4-211ENST00000622020 PLEKHF1Q96S99 279 aa19.84■□□□□ 0.77
NPHP4-211ENST00000622020 HSP90AA1P07900 732 aaKnown RBP19.84■□□□□ 0.77
NPHP4-211ENST00000622020 ANKRD45Q5TZF3 282 aa19.84■□□□□ 0.77
NPHP4-211ENST00000622020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.84■□□□□ 0.77
NPHP4-211ENST00000622020 RSPH6AQ9H0K4 717 aa19.84■□□□□ 0.77
NPHP4-211ENST00000622020 CD109Q6YHK3 1445 aa19.84■□□□□ 0.77
NPHP4-211ENST00000622020 HMOX1P09601 288 aa19.83■□□□□ 0.76
NPHP4-211ENST00000622020 DEPDC5O75140 1603 aa19.83■□□□□ 0.76
NPHP4-211ENST00000622020 NAP1L5Q96NT1 182 aaPredicted RBP19.82■□□□□ 0.76
NPHP4-211ENST00000622020 KIAA1210Q9ULL0 1709 aa19.82■□□□□ 0.76
NPHP4-211ENST00000622020 HDAC1Q13547 482 aaPredicted RBP19.82■□□□□ 0.76
NPHP4-211ENST00000622020 RBM42Q9BTD8 480 aaKnown RBP19.82■□□□□ 0.76
NPHP4-211ENST00000622020 ZBTB40Q9NUA8 1239 aa19.82■□□□□ 0.76
NPHP4-211ENST00000622020 NPATQ14207 1427 aa19.82■□□□□ 0.76
NPHP4-211ENST00000622020 HSP90AB1P08238 724 aaKnown RBP19.81■□□□□ 0.76
NPHP4-211ENST00000622020 A0A1W2PP64 1363 aa19.81■□□□□ 0.76
NPHP4-211ENST00000622020 FYB1O15117 783 aa19.81■□□□□ 0.76
NPHP4-211ENST00000622020 ANKRD36BQ8N2N9 1353 aa19.8■□□□□ 0.76
NPHP4-211ENST00000622020 SMC5Q8IY18 1101 aa19.8■□□□□ 0.76
NPHP4-211ENST00000622020 VWDEQ8N2E2 1590 aa19.8■□□□□ 0.76
NPHP4-211ENST00000622020 MROH1Q8NDA8 1641 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms