RNA–Protein interactions for RNA: ENST00000621640.1

GTF2I-220, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-220ENST00000621640 ADAMTS2O95450 1211 aa22.96■■□□□ 1.27
GTF2I-220ENST00000621640 RGL3Q3MIN7 710 aa22.96■■□□□ 1.27
GTF2I-220ENST00000621640 ANKRD30BQ9BXX2 1392 aa22.96■■□□□ 1.27
GTF2I-220ENST00000621640 RGS12O14924 1447 aa22.96■■□□□ 1.27
GTF2I-220ENST00000621640 PIK3C2GO75747 1445 aa22.95■■□□□ 1.26
GTF2I-220ENST00000621640 COL22A1Q8NFW1 1626 aaPredicted RBP22.94■■□□□ 1.26
GTF2I-220ENST00000621640 LRPPRCP42704 1394 aaKnown RBP22.94■■□□□ 1.26
GTF2I-220ENST00000621640 QTRT2Q9H974 415 aaKnown RBP22.93■■□□□ 1.26
GTF2I-220ENST00000621640 PXDNQ92626 1479 aa22.92■■□□□ 1.26
GTF2I-220ENST00000621640 KNDC1Q76NI1 1749 aa22.92■■□□□ 1.26
GTF2I-220ENST00000621640 STK26Q9P289 416 aa22.92■■□□□ 1.26
GTF2I-220ENST00000621640 ABCC11Q96J66 1382 aa22.91■■□□□ 1.26
GTF2I-220ENST00000621640 RBM6P78332 1123 aaKnown RBP22.91■■□□□ 1.26
GTF2I-220ENST00000621640 ESCO1Q5FWF5 840 aa22.91■■□□□ 1.26
GTF2I-220ENST00000621640 WAPLQ7Z5K2 1190 aa22.91■■□□□ 1.26
GTF2I-220ENST00000621640 NGLY1Q96IV0 654 aa22.91■■□□□ 1.26
GTF2I-220ENST00000621640 MYOM2P54296 1465 aa22.91■■□□□ 1.26
GTF2I-220ENST00000621640 PLEKHH1Q9ULM0 1364 aa22.9■■□□□ 1.26
GTF2I-220ENST00000621640 TMEM132EQ6IEE7 984 aa22.9■■□□□ 1.26
GTF2I-220ENST00000621640 NPHP3Q7Z494 1330 aa22.89■■□□□ 1.26
GTF2I-220ENST00000621640 YTHDC2Q9H6S0 1430 aaKnown RBP22.87■■□□□ 1.25
GTF2I-220ENST00000621640 FOXO3O43524 673 aa22.86■■□□□ 1.25
GTF2I-220ENST00000621640 NRXN1Q9ULB1 1477 aa22.85■■□□□ 1.25
GTF2I-220ENST00000621640 NUTM2FA1L443 756 aa22.85■■□□□ 1.25
GTF2I-220ENST00000621640 XPCQ01831 940 aaPredicted RBP22.85■■□□□ 1.25
GTF2I-220ENST00000621640 FNBP4Q8N3X1 1017 aaPredicted RBP22.85■■□□□ 1.25
GTF2I-220ENST00000621640 USP21Q9UK80 565 aa22.85■■□□□ 1.25
GTF2I-220ENST00000621640 FMN2Q9NZ56 1722 aa22.85■■□□□ 1.25
GTF2I-220ENST00000621640 ATRNO75882 1429 aa22.82■■□□□ 1.24
GTF2I-220ENST00000621640 C14orf93Q9H972 538 aaKnown RBP22.81■■□□□ 1.24
GTF2I-220ENST00000621640 TRPC5Q9UL62 973 aaPredicted RBP22.81■■□□□ 1.24
GTF2I-220ENST00000621640 KIF1AQ12756 1690 aa22.8■■□□□ 1.24
GTF2I-220ENST00000621640 MARF1Q9Y4F3 1742 aaKnown RBP22.79■■□□□ 1.24
GTF2I-220ENST00000621640 SIRT1Q96EB6 747 aa22.79■■□□□ 1.24
GTF2I-220ENST00000621640 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
GTF2I-220ENST00000621640 BCL9LQ86UU0 1499 aa22.79■■□□□ 1.24
GTF2I-220ENST00000621640 CFAP70Q5T0N1 1121 aa22.77■■□□□ 1.24
GTF2I-220ENST00000621640 EP400Q96L91 3159 aa22.77■■□□□ 1.23
GTF2I-220ENST00000621640 RAB3GAP2Q9H2M9 1393 aa22.76■■□□□ 1.23
GTF2I-220ENST00000621640 SPATA31A3Q5VYP0 1347 aa22.75■■□□□ 1.23
GTF2I-220ENST00000621640 ATAD2Q6PL18 1390 aa22.75■■□□□ 1.23
GTF2I-220ENST00000621640 DHX57Q6P158 1386 aaKnown RBP22.74■■□□□ 1.23
GTF2I-220ENST00000621640 RGPD8O14715 1765 aaPredicted RBP22.72■■□□□ 1.23
GTF2I-220ENST00000621640 DLC1Q96QB1 1528 aa22.72■■□□□ 1.23
GTF2I-220ENST00000621640 PRAM1Q96QH2 718 aa22.71■■□□□ 1.23
GTF2I-220ENST00000621640 ADGRB1O14514 1584 aa22.71■■□□□ 1.23
GTF2I-220ENST00000621640 USP32Q8NFA0 1604 aa22.71■■□□□ 1.23
GTF2I-220ENST00000621640 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.71■■□□□ 1.23
GTF2I-220ENST00000621640 KRT28Q7Z3Y7 464 aa22.7■■□□□ 1.22
GTF2I-220ENST00000621640 SLIT2O94813 1529 aa22.7■■□□□ 1.22
GTF2I-220ENST00000621640 SRCAPQ6ZRS2 3230 aa22.7■■□□□ 1.22
GTF2I-220ENST00000621640 TNS3Q68CZ2 1445 aa22.69■■□□□ 1.22
GTF2I-220ENST00000621640 SAFB2Q14151 953 aaKnown RBP eCLIP22.69■■□□□ 1.22
GTF2I-220ENST00000621640 PHF8Q9UPP1 1060 aa22.69■■□□□ 1.22
GTF2I-220ENST00000621640 ADGRB2O60241 1585 aa22.67■■□□□ 1.22
GTF2I-220ENST00000621640 GJD4Q96KN9 370 aaPredicted RBP22.67■■□□□ 1.22
GTF2I-220ENST00000621640 GLI3P10071 1580 aa22.67■■□□□ 1.22
GTF2I-220ENST00000621640 ANKARQ7Z5J8 1434 aa22.65■■□□□ 1.22
GTF2I-220ENST00000621640 UNC5CLQ8IV45 518 aa22.65■■□□□ 1.22
GTF2I-220ENST00000621640 RALGAPBQ86X10 1494 aa22.65■■□□□ 1.22
GTF2I-220ENST00000621640 SBNO1A3KN83 1393 aa22.64■■□□□ 1.22
GTF2I-220ENST00000621640 ABCA3Q99758 1704 aa22.64■■□□□ 1.21
GTF2I-220ENST00000621640 POGKQ9P215 609 aa22.63■■□□□ 1.21
GTF2I-220ENST00000621640 PSME1Q06323 249 aa22.62■■□□□ 1.21
GTF2I-220ENST00000621640 CABLES1Q8TDN4 633 aa22.62■■□□□ 1.21
GTF2I-220ENST00000621640 TRAK1Q9UPV9 953 aa22.6■■□□□ 1.21
GTF2I-220ENST00000621640 ARHGEF10O15013 1369 aa22.6■■□□□ 1.21
GTF2I-220ENST00000621640 PLCH1Q4KWH8 1693 aa22.59■■□□□ 1.21
GTF2I-220ENST00000621640 PMFBP1Q8TBY8 1022 aa22.59■■□□□ 1.21
GTF2I-220ENST00000621640 TRPM3Q9HCF6 1732 aaPredicted RBP22.58■■□□□ 1.21
GTF2I-220ENST00000621640 HIRIP3Q9BW71 556 aaPredicted RBP22.58■■□□□ 1.21
GTF2I-220ENST00000621640 NWD2Q9ULI1 1742 aa22.57■■□□□ 1.2
GTF2I-220ENST00000621640 PLEKHG5O94827 1062 aa22.57■■□□□ 1.2
GTF2I-220ENST00000621640 HAP1P54257 671 aaPredicted RBP22.57■■□□□ 1.2
GTF2I-220ENST00000621640 DCAF11Q8TEB1 546 aa22.57■■□□□ 1.2
GTF2I-220ENST00000621640 KDM2AQ9Y2K7 1162 aa22.57■■□□□ 1.2
GTF2I-220ENST00000621640 TULP4Q9NRJ4 1543 aa22.57■■□□□ 1.2
GTF2I-220ENST00000621640 MINK1Q8N4C8 1332 aaPredicted RBP22.57■■□□□ 1.2
GTF2I-220ENST00000621640 PRR36Q9H6K5 1346 aa22.57■■□□□ 1.2
GTF2I-220ENST00000621640 LMOD2Q6P5Q4 547 aa22.56■■□□□ 1.2
GTF2I-220ENST00000621640 VPS72Q15906 364 aa22.54■■□□□ 1.2
GTF2I-220ENST00000621640 CCDC125Q86Z20 511 aa22.54■■□□□ 1.2
GTF2I-220ENST00000621640 ALS2Q96Q42 1657 aa22.54■■□□□ 1.2
GTF2I-220ENST00000621640 EIF3AQ14152 1382 aaKnown RBP22.53■■□□□ 1.2
GTF2I-220ENST00000621640 BRWD3Q6RI45 1802 aa22.53■■□□□ 1.2
GTF2I-220ENST00000621640 HRCP23327 699 aa22.52■■□□□ 1.2
GTF2I-220ENST00000621640 FAM83GA6ND36 823 aa22.51■■□□□ 1.19
GTF2I-220ENST00000621640 WASLO00401 505 aaPredicted RBP22.51■■□□□ 1.19
GTF2I-220ENST00000621640 STAC3Q96MF2 364 aa22.51■■□□□ 1.19
GTF2I-220ENST00000621640 ARHGEF28Q8N1W1 1705 aaKnown RBP22.51■■□□□ 1.19
GTF2I-220ENST00000621640 SEPT12Q8IYM1 358 aa22.5■■□□□ 1.19
GTF2I-220ENST00000621640 NRAPQ86VF7 1730 aa22.5■■□□□ 1.19
GTF2I-220ENST00000621640 GPRASP1Q5JY77 1395 aa22.5■■□□□ 1.19
GTF2I-220ENST00000621640 BLMP54132 1417 aaPredicted RBP22.49■■□□□ 1.19
GTF2I-220ENST00000621640 ONECUT3O60422 494 aaPredicted RBP22.49■■□□□ 1.19
GTF2I-220ENST00000621640 CRYBG1Q9Y4K1 1723 aa22.48■■□□□ 1.19
GTF2I-220ENST00000621640 ATP7BP35670 1465 aa22.47■■□□□ 1.19
GTF2I-220ENST00000621640 ZRANB1Q9UGI0 708 aa22.47■■□□□ 1.19
GTF2I-220ENST00000621640 CCDC9Q9Y3X0 531 aaKnown RBP22.46■■□□□ 1.19
GTF2I-220ENST00000621640 COL14A1Q05707 1796 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms