RNA–Protein interactions for RNA: ENST00000621176.1

TRIM6-212, Transcript of tripartite motif containing 6, humanhuman

TSL 5 BASIC

Gene TRIM6, Length 3,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-212ENST00000621176 TRAK1Q9UPV9 953 aa11.24□□□□□ -0.61
TRIM6-212ENST00000621176 ATP7AQ04656 1500 aa11.24□□□□□ -0.61
TRIM6-212ENST00000621176 SBNO2Q9Y2G9 1366 aa11.24□□□□□ -0.61
TRIM6-212ENST00000621176 PMFBP1Q8TBY8 1022 aa11.23□□□□□ -0.61
TRIM6-212ENST00000621176 PDZRN3Q9UPQ7 1066 aa11.23□□□□□ -0.61
TRIM6-212ENST00000621176 NEURL4Q96JN8 1562 aa11.23□□□□□ -0.61
TRIM6-212ENST00000621176 BECN1Q14457 450 aa11.23□□□□□ -0.61
TRIM6-212ENST00000621176 ANTXR1Q9H6X2 564 aa11.23□□□□□ -0.61
TRIM6-212ENST00000621176 UHRF1BP1LA0JNW5 1464 aa11.23□□□□□ -0.61
TRIM6-212ENST00000621176 IQSEC2Q5JU85 1478 aa11.23□□□□□ -0.61
TRIM6-212ENST00000621176 PRKCSHP14314 528 aaPredicted RBP11.22□□□□□ -0.61
TRIM6-212ENST00000621176 MTHFSP49914 203 aa11.22□□□□□ -0.61
TRIM6-212ENST00000621176 MROH1Q8NDA8 1641 aa11.22□□□□□ -0.61
TRIM6-212ENST00000621176 WDR63Q8IWG1 891 aa11.22□□□□□ -0.61
TRIM6-212ENST00000621176 TBC1D32Q96NH3 1257 aa11.22□□□□□ -0.61
TRIM6-212ENST00000621176 NOS1P29475 1434 aa11.22□□□□□ -0.61
TRIM6-212ENST00000621176 INO80Q9ULG1 1556 aaPredicted RBP11.22□□□□□ -0.61
TRIM6-212ENST00000621176 NRXN1Q9ULB1 1477 aa11.21□□□□□ -0.61
TRIM6-212ENST00000621176 MROH2AA6NES4 1674 aa11.21□□□□□ -0.61
TRIM6-212ENST00000621176 MYO3AQ8NEV4 1616 aa11.21□□□□□ -0.61
TRIM6-212ENST00000621176 FANCAO15360 1455 aa11.21□□□□□ -0.61
TRIM6-212ENST00000621176 ARAP3Q8WWN8 1544 aa11.21□□□□□ -0.61
TRIM6-212ENST00000621176 CHGAP10645 457 aaKnown RBP11.21□□□□□ -0.62
TRIM6-212ENST00000621176 TMEM132EQ6IEE7 984 aa11.21□□□□□ -0.62
TRIM6-212ENST00000621176 TBC1D2Q9BYX2 928 aa11.21□□□□□ -0.62
TRIM6-212ENST00000621176 KIF1BO60333 1816 aa11.21□□□□□ -0.62
TRIM6-212ENST00000621176 IFT172Q9UG01 1749 aa11.21□□□□□ -0.62
TRIM6-212ENST00000621176 AAMPQ13685 434 aa11.19□□□□□ -0.62
TRIM6-212ENST00000621176 UPF2Q9HAU5 1272 aaKnown RBP11.19□□□□□ -0.62
TRIM6-212ENST00000621176 ZNF518AQ6AHZ1 1483 aa11.19□□□□□ -0.62
TRIM6-212ENST00000621176 EFCAB6Q5THR3 1501 aa11.19□□□□□ -0.62
TRIM6-212ENST00000621176 CCDC27Q2M243 656 aa11.19□□□□□ -0.62
TRIM6-212ENST00000621176 RWDD1Q9H446 243 aaPredicted RBP11.19□□□□□ -0.62
TRIM6-212ENST00000621176 MVPQ14764 893 aaKnown RBP11.18□□□□□ -0.62
TRIM6-212ENST00000621176 C14orf93Q9H972 538 aaKnown RBP11.18□□□□□ -0.62
TRIM6-212ENST00000621176 PPRC1Q5VV67 1664 aaKnown RBP11.17□□□□□ -0.62
TRIM6-212ENST00000621176 ADGRL1O94910 1474 aa11.17□□□□□ -0.62
TRIM6-212ENST00000621176 SPRYD3Q8NCJ5 442 aa11.17□□□□□ -0.62
TRIM6-212ENST00000621176 ZMYM3Q14202 1370 aa11.17□□□□□ -0.62
TRIM6-212ENST00000621176 U2AF1L5P0DN76 240 aaPredicted RBP11.17□□□□□ -0.62
TRIM6-212ENST00000621176 U2AF1Q01081 240 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRIM6-212ENST00000621176 TSR2Q969E8 191 aaKnown RBP11.17□□□□□ -0.62
TRIM6-212ENST00000621176 ABCA9Q8IUA7 1624 aa11.17□□□□□ -0.62
TRIM6-212ENST00000621176 SETBP1Q9Y6X0 1596 aa11.16□□□□□ -0.62
TRIM6-212ENST00000621176 FAM43AQ8N2R8 423 aa11.16□□□□□ -0.62
TRIM6-212ENST00000621176 CFAP53Q96M91 514 aa11.16□□□□□ -0.62
TRIM6-212ENST00000621176 MYH16Q9H6N6 1097 aa11.16□□□□□ -0.62
TRIM6-212ENST00000621176 ADGRB3O60242 1522 aa11.16□□□□□ -0.62
TRIM6-212ENST00000621176 QRICH2Q9H0J4 1663 aa11.16□□□□□ -0.62
TRIM6-212ENST00000621176 ADGRB1O14514 1584 aa11.15□□□□□ -0.62
TRIM6-212ENST00000621176 DZIP1LQ8IYY4 767 aaKnown RBP11.15□□□□□ -0.62
TRIM6-212ENST00000621176 ZKSCAN2Q63HK3 967 aa11.15□□□□□ -0.62
TRIM6-212ENST00000621176 CFAP65Q6ZU64 1925 aaKnown RBP11.15□□□□□ -0.62
TRIM6-212ENST00000621176 ZC3H13Q5T200 1668 aaKnown RBP11.15□□□□□ -0.63
TRIM6-212ENST00000621176 FTSJ3Q8IY81 847 aaKnown RBP11.14□□□□□ -0.63
TRIM6-212ENST00000621176 TRIM27P14373 513 aa11.14□□□□□ -0.63
TRIM6-212ENST00000621176 NUTM2DQ5VT03 806 aaPredicted RBP11.14□□□□□ -0.63
TRIM6-212ENST00000621176 EXOSC9Q06265 439 aaKnown RBP11.13□□□□□ -0.63
TRIM6-212ENST00000621176 NPATQ14207 1427 aa11.13□□□□□ -0.63
TRIM6-212ENST00000621176 MFAP1P55081 439 aaKnown RBP11.13□□□□□ -0.63
TRIM6-212ENST00000621176 ARXQ96QS3 562 aa11.13□□□□□ -0.63
TRIM6-212ENST00000621176 C22orf23Q9BZE7 217 aa11.13□□□□□ -0.63
TRIM6-212ENST00000621176 SMC4Q9NTJ3 1288 aa11.13□□□□□ -0.63
TRIM6-212ENST00000621176 KIDINS220Q9ULH0 1771 aa11.13□□□□□ -0.63
TRIM6-212ENST00000621176 USP32Q8NFA0 1604 aa11.12□□□□□ -0.63
TRIM6-212ENST00000621176 EIF5BO60841 1220 aaKnown RBP11.12□□□□□ -0.63
TRIM6-212ENST00000621176 SSH1Q8WYL5 1049 aa11.12□□□□□ -0.63
TRIM6-212ENST00000621176 CABP2Q9NPB3 220 aa11.12□□□□□ -0.63
TRIM6-212ENST00000621176 LMTK2Q8IWU2 1503 aa11.12□□□□□ -0.63
TRIM6-212ENST00000621176 ANKRD36BQ8N2N9 1353 aa11.12□□□□□ -0.63
TRIM6-212ENST00000621176 MCM4P33991 863 aa11.11□□□□□ -0.63
TRIM6-212ENST00000621176 NCBP3Q53F19 620 aaKnown RBP11.11□□□□□ -0.63
TRIM6-212ENST00000621176 GGT6Q6P531 493 aa11.11□□□□□ -0.63
TRIM6-212ENST00000621176 PLEKHF1Q96S99 279 aa11.11□□□□□ -0.63
TRIM6-212ENST00000621176 TRIM35Q9UPQ4 493 aa11.11□□□□□ -0.63
TRIM6-212ENST00000621176 PPLO60437 1756 aa11.11□□□□□ -0.63
TRIM6-212ENST00000621176 CD109Q6YHK3 1445 aa11.11□□□□□ -0.63
TRIM6-212ENST00000621176 SAFB2Q14151 953 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRIM6-212ENST00000621176 RRAGDQ9NQL2 400 aaPredicted RBP11.11□□□□□ -0.63
TRIM6-212ENST00000621176 ADGRB2O60241 1585 aa11.11□□□□□ -0.63
TRIM6-212ENST00000621176 U2SURPO15042 1029 aaKnown RBP11.11□□□□□ -0.63
TRIM6-212ENST00000621176 TMPOP42166 694 aaKnown RBP11.11□□□□□ -0.63
TRIM6-212ENST00000621176 HDAC1Q13547 482 aaPredicted RBP11.11□□□□□ -0.63
TRIM6-212ENST00000621176 ITPRIPQ8IWB1 547 aa11.11□□□□□ -0.63
TRIM6-212ENST00000621176 GZF1Q9H116 711 aaPredicted RBP11.11□□□□□ -0.63
TRIM6-212ENST00000621176 EVC2Q86UK5 1308 aa11.1□□□□□ -0.63
TRIM6-212ENST00000621176 TULP4Q9NRJ4 1543 aa11.1□□□□□ -0.63
TRIM6-212ENST00000621176 XRCC6P12956 609 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRIM6-212ENST00000621176 L1TD1Q5T7N2 865 aaKnown RBP11.1□□□□□ -0.63
TRIM6-212ENST00000621176 CT47B1P0C2W7 299 aaPredicted RBP11.1□□□□□ -0.63
TRIM6-212ENST00000621176 ATF7IPQ6VMQ6 1270 aa11.1□□□□□ -0.63
TRIM6-212ENST00000621176 NOB1Q9ULX3 412 aaKnown RBP11.1□□□□□ -0.63
TRIM6-212ENST00000621176 GGNBP2Q9H3C7 697 aa11.09□□□□□ -0.63
TRIM6-212ENST00000621176 SENP3Q9H4L4 574 aaPredicted RBP11.09□□□□□ -0.63
TRIM6-212ENST00000621176 DDX19BQ9UMR2 479 aa11.09□□□□□ -0.63
TRIM6-212ENST00000621176 NSD2O96028 1365 aa11.09□□□□□ -0.63
TRIM6-212ENST00000621176 FSD2A1L4K1 749 aa11.09□□□□□ -0.63
TRIM6-212ENST00000621176 SMC5Q8IY18 1101 aa11.09□□□□□ -0.63
TRIM6-212ENST00000621176 TMEM57Q8N5G2 664 aa11.09□□□□□ -0.63
TRIM6-212ENST00000621176 PUS7Q96PZ0 661 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms