RNA–Protein interactions for RNA: ENST00000621013.4

SLC39A1-211, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLC39A1, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-211ENST00000621013 MORC1Q86VD1 984 aa22.55■■□□□ 1.2
SLC39A1-211ENST00000621013 QRICH2Q9H0J4 1663 aa22.55■■□□□ 1.2
SLC39A1-211ENST00000621013 PPLO60437 1756 aa22.55■■□□□ 1.2
SLC39A1-211ENST00000621013 GSE1Q14687 1217 aa22.54■■□□□ 1.2
SLC39A1-211ENST00000621013 C14orf93Q9H972 538 aaKnown RBP22.54■■□□□ 1.2
SLC39A1-211ENST00000621013 ZNF518AQ6AHZ1 1483 aa22.54■■□□□ 1.2
SLC39A1-211ENST00000621013 NCBP3Q53F19 620 aaKnown RBP22.53■■□□□ 1.2
SLC39A1-211ENST00000621013 WDR63Q8IWG1 891 aa22.52■■□□□ 1.2
SLC39A1-211ENST00000621013 CANXP27824 592 aaKnown RBP22.51■■□□□ 1.19
SLC39A1-211ENST00000621013 ZMYM3Q14202 1370 aa22.51■■□□□ 1.19
SLC39A1-211ENST00000621013 CCDC27Q2M243 656 aa22.51■■□□□ 1.19
SLC39A1-211ENST00000621013 USP19O94966 1318 aa22.5■■□□□ 1.19
SLC39A1-211ENST00000621013 RARSP54136 660 aaKnown RBP22.5■■□□□ 1.19
SLC39A1-211ENST00000621013 PANK1Q8TE04 598 aa22.5■■□□□ 1.19
SLC39A1-211ENST00000621013 COG6Q9Y2V7 657 aa22.5■■□□□ 1.19
SLC39A1-211ENST00000621013 ASXL2Q76L83 1435 aa22.5■■□□□ 1.19
SLC39A1-211ENST00000621013 RPGRIP1LQ68CZ1 1315 aa22.5■■□□□ 1.19
SLC39A1-211ENST00000621013 PUS7Q96PZ0 661 aaKnown RBP22.49■■□□□ 1.19
SLC39A1-211ENST00000621013 NPATQ14207 1427 aa22.49■■□□□ 1.19
SLC39A1-211ENST00000621013 TCP11L2Q8N4U5 519 aa22.48■■□□□ 1.19
SLC39A1-211ENST00000621013 SLC12A5Q9H2X9 1139 aa22.48■■□□□ 1.19
SLC39A1-211ENST00000621013 TRAK1Q9UPV9 953 aa22.48■■□□□ 1.19
SLC39A1-211ENST00000621013 IL27Q8NEV9 243 aa22.48■■□□□ 1.19
SLC39A1-211ENST00000621013 PMFBP1Q8TBY8 1022 aa22.47■■□□□ 1.19
SLC39A1-211ENST00000621013 NSD2O96028 1365 aa22.46■■□□□ 1.19
SLC39A1-211ENST00000621013 CFAP53Q96M91 514 aa22.45■■□□□ 1.18
SLC39A1-211ENST00000621013 FRMPD1Q5SYB0 1578 aa22.45■■□□□ 1.18
SLC39A1-211ENST00000621013 HECW2Q9P2P5 1572 aa22.44■■□□□ 1.18
SLC39A1-211ENST00000621013 NLRP1Q9C000 1473 aa22.43■■□□□ 1.18
SLC39A1-211ENST00000621013 MLH3Q9UHC1 1453 aa22.43■■□□□ 1.18
SLC39A1-211ENST00000621013 CHGAP10645 457 aaKnown RBP22.43■■□□□ 1.18
SLC39A1-211ENST00000621013 FRAT1Q92837 279 aaPredicted RBP22.43■■□□□ 1.18
SLC39A1-211ENST00000621013 RRP7AQ9Y3A4 280 aaKnown RBP22.43■■□□□ 1.18
SLC39A1-211ENST00000621013 MTHFSP49914 203 aa22.42■■□□□ 1.18
SLC39A1-211ENST00000621013 NEUROD2Q15784 382 aa22.42■■□□□ 1.18
SLC39A1-211ENST00000621013 ANKRD36BQ8N2N9 1353 aa22.41■■□□□ 1.18
SLC39A1-211ENST00000621013 CFAP74Q9C0B2 1584 aa22.41■■□□□ 1.18
SLC39A1-211ENST00000621013 POGZQ7Z3K3 1410 aa22.41■■□□□ 1.18
SLC39A1-211ENST00000621013 TNNT2P45379 298 aaPredicted RBP22.41■■□□□ 1.18
SLC39A1-211ENST00000621013 ADGRB2O60241 1585 aa22.41■■□□□ 1.18
SLC39A1-211ENST00000621013 GLI2P10070 1586 aa22.41■■□□□ 1.18
SLC39A1-211ENST00000621013 MYH16Q9H6N6 1097 aa22.4■■□□□ 1.18
SLC39A1-211ENST00000621013 ABCC3O15438 1527 aa22.39■■□□□ 1.18
SLC39A1-211ENST00000621013 TULP4Q9NRJ4 1543 aa22.39■■□□□ 1.18
SLC39A1-211ENST00000621013 FRAT2O75474 233 aaPredicted RBP22.39■■□□□ 1.17
SLC39A1-211ENST00000621013 RLBP1P12271 317 aa22.39■■□□□ 1.17
SLC39A1-211ENST00000621013 PCDHB15Q9Y5E8 787 aa22.39■■□□□ 1.17
SLC39A1-211ENST00000621013 SEC24BO95487 1268 aa22.39■■□□□ 1.17
SLC39A1-211ENST00000621013 EVC2Q86UK5 1308 aa22.38■■□□□ 1.17
SLC39A1-211ENST00000621013 ARHGEF28Q8N1W1 1705 aaKnown RBP22.38■■□□□ 1.17
SLC39A1-211ENST00000621013 BECN1Q14457 450 aa22.38■■□□□ 1.17
SLC39A1-211ENST00000621013 TMEM132EQ6IEE7 984 aa22.38■■□□□ 1.17
SLC39A1-211ENST00000621013 CT47B1P0C2W7 299 aaPredicted RBP22.36■■□□□ 1.17
SLC39A1-211ENST00000621013 PIK3C2BO00750 1634 aa22.36■■□□□ 1.17
SLC39A1-211ENST00000621013 CAMSAP1Q5T5Y3 1602 aa22.35■■□□□ 1.17
SLC39A1-211ENST00000621013 RWDD1Q9H446 243 aaPredicted RBP22.35■■□□□ 1.17
SLC39A1-211ENST00000621013 NEXMIFQ5QGS0 1516 aa22.34■■□□□ 1.17
SLC39A1-211ENST00000621013 PDZRN3Q9UPQ7 1066 aa22.34■■□□□ 1.17
SLC39A1-211ENST00000621013 TNNQ9UQP3 1299 aa22.34■■□□□ 1.17
SLC39A1-211ENST00000621013 MVPQ14764 893 aaKnown RBP22.32■■□□□ 1.16
SLC39A1-211ENST00000621013 GGT6Q6P531 493 aa22.32■■□□□ 1.16
SLC39A1-211ENST00000621013 VGFO15240 615 aaPredicted RBP22.31■■□□□ 1.16
SLC39A1-211ENST00000621013 TBC1D32Q96NH3 1257 aa22.31■■□□□ 1.16
SLC39A1-211ENST00000621013 BCL2L13Q9BXK5 485 aa22.31■■□□□ 1.16
SLC39A1-211ENST00000621013 UPF2Q9HAU5 1272 aaKnown RBP22.31■■□□□ 1.16
SLC39A1-211ENST00000621013 BRPF3Q9ULD4 1205 aa22.31■■□□□ 1.16
SLC39A1-211ENST00000621013 SIGLEC1Q9BZZ2 1709 aa22.31■■□□□ 1.16
SLC39A1-211ENST00000621013 U2AF1L5P0DN76 240 aaPredicted RBP22.3■■□□□ 1.16
SLC39A1-211ENST00000621013 U2AF1Q01081 240 aaKnown RBP eCLIP22.3■■□□□ 1.16
SLC39A1-211ENST00000621013 ZKSCAN2Q63HK3 967 aa22.3■■□□□ 1.16
SLC39A1-211ENST00000621013 CFAP65Q6ZU64 1925 aaKnown RBP22.3■■□□□ 1.16
SLC39A1-211ENST00000621013 ABCC11Q96J66 1382 aa22.3■■□□□ 1.16
SLC39A1-211ENST00000621013 CD109Q6YHK3 1445 aa22.3■■□□□ 1.16
SLC39A1-211ENST00000621013 ZFYVE9O95405 1425 aa22.28■■□□□ 1.16
SLC39A1-211ENST00000621013 DZIP1LQ8IYY4 767 aaKnown RBP22.27■■□□□ 1.16
SLC39A1-211ENST00000621013 COL3A1P02461 1466 aaPredicted RBP22.27■■□□□ 1.16
SLC39A1-211ENST00000621013 RTN4Q9NQC3 1192 aaKnown RBP22.26■■□□□ 1.15
SLC39A1-211ENST00000621013 ARHGAP31Q2M1Z3 1444 aa22.26■■□□□ 1.15
SLC39A1-211ENST00000621013 PLEKHF1Q96S99 279 aa22.26■■□□□ 1.15
SLC39A1-211ENST00000621013 ANTXR1Q9H6X2 564 aa22.26■■□□□ 1.15
SLC39A1-211ENST00000621013 MED14O60244 1454 aa22.25■■□□□ 1.15
SLC39A1-211ENST00000621013 A0A1W2PP64 1363 aa22.25■■□□□ 1.15
SLC39A1-211ENST00000621013 CABP2Q9NPB3 220 aa22.24■■□□□ 1.15
SLC39A1-211ENST00000621013 FTSJ3Q8IY81 847 aaKnown RBP22.24■■□□□ 1.15
SLC39A1-211ENST00000621013 OSCARQ8IYS5 282 aa22.24■■□□□ 1.15
SLC39A1-211ENST00000621013 IL16Q14005 1332 aa22.24■■□□□ 1.15
SLC39A1-211ENST00000621013 HDAC1Q13547 482 aaPredicted RBP22.23■■□□□ 1.15
SLC39A1-211ENST00000621013 NPM1P06748 294 aaKnown RBP eCLIP22.22■■□□□ 1.15
SLC39A1-211ENST00000621013 ANKRD26Q9UPS8 1709 aa22.22■■□□□ 1.15
SLC39A1-211ENST00000621013 TMPOP42166 694 aaKnown RBP22.22■■□□□ 1.15
SLC39A1-211ENST00000621013 TBC1D2Q9BYX2 928 aa22.2■■□□□ 1.15
SLC39A1-211ENST00000621013 TRIM35Q9UPQ4 493 aa22.2■■□□□ 1.15
SLC39A1-211ENST00000621013 TSR2Q969E8 191 aaKnown RBP22.2■■□□□ 1.14
SLC39A1-211ENST00000621013 SMC4Q9NTJ3 1288 aa22.2■■□□□ 1.14
SLC39A1-211ENST00000621013 DDX19BQ9UMR2 479 aa22.2■■□□□ 1.14
SLC39A1-211ENST00000621013 ATAD2Q6PL18 1390 aa22.2■■□□□ 1.14
SLC39A1-211ENST00000621013 NEO1Q92859 1461 aa22.19■■□□□ 1.14
SLC39A1-211ENST00000621013 EXOSC9Q06265 439 aaKnown RBP22.19■■□□□ 1.14
SLC39A1-211ENST00000621013 CLTCQ00610 1675 aaKnown RBP22.19■■□□□ 1.14
SLC39A1-211ENST00000621013 TRIM27P14373 513 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms