RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 TRIM44Q96DX7 344 aaPredicted RBP6.65□□□□□ -1.35
MATR3-228ENST00000620916 DDRGK1Q96HY6 314 aa6.65□□□□□ -1.35
MATR3-228ENST00000620916 CLIP1P30622 1438 aa6.64□□□□□ -1.35
MATR3-228ENST00000620916 DEPDC5O75140 1603 aa6.64□□□□□ -1.35
MATR3-228ENST00000620916 ABCA6Q8N139 1617 aa6.64□□□□□ -1.35
MATR3-228ENST00000620916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.64□□□□□ -1.35
MATR3-228ENST00000620916 BRPF1P55201 1214 aaPredicted RBP6.64□□□□□ -1.35
MATR3-228ENST00000620916 SHANK2Q9UPX8 1470 aa6.64□□□□□ -1.35
MATR3-228ENST00000620916 MYO3AQ8NEV4 1616 aa6.64□□□□□ -1.35
MATR3-228ENST00000620916 CEP170BQ9Y4F5 1589 aaPredicted RBP6.64□□□□□ -1.35
MATR3-228ENST00000620916 PYGBP11216 843 aa6.64□□□□□ -1.35
MATR3-228ENST00000620916 ZNF592Q92610 1267 aa6.64□□□□□ -1.35
MATR3-228ENST00000620916 FMN1Q68DA7 1419 aa6.64□□□□□ -1.35
MATR3-228ENST00000620916 SUPT6HQ7KZ85 1726 aaKnown RBP6.63□□□□□ -1.35
MATR3-228ENST00000620916 CEBPAP49715 358 aaPredicted RBP6.63□□□□□ -1.35
MATR3-228ENST00000620916 TERF1P54274 439 aa6.63□□□□□ -1.35
MATR3-228ENST00000620916 LMOD2Q6P5Q4 547 aa6.63□□□□□ -1.35
MATR3-228ENST00000620916 A2ML1A8K2U0 1454 aa6.63□□□□□ -1.35
MATR3-228ENST00000620916 MROH1Q8NDA8 1641 aa6.63□□□□□ -1.35
MATR3-228ENST00000620916 UBTFP17480 764 aaKnown RBP6.63□□□□□ -1.35
MATR3-228ENST00000620916 MTERF4Q7Z6M4 381 aaKnown RBP6.63□□□□□ -1.35
MATR3-228ENST00000620916 PRDM10Q9NQV6 1147 aa6.63□□□□□ -1.35
MATR3-228ENST00000620916 PPP4R3BQ5MIZ7 849 aa6.63□□□□□ -1.35
MATR3-228ENST00000620916 YY1AP1Q9H869 796 aa6.63□□□□□ -1.35
MATR3-228ENST00000620916 TROQ12816 1431 aaPredicted RBP6.63□□□□□ -1.35
MATR3-228ENST00000620916 ABCC1P33527 1531 aa6.62□□□□□ -1.35
MATR3-228ENST00000620916 SYNMO15061 1565 aa6.62□□□□□ -1.35
MATR3-228ENST00000620916 RRBP1Q9P2E9 1410 aaKnown RBP6.62□□□□□ -1.35
MATR3-228ENST00000620916 PPP4R2Q9NY27 417 aa6.62□□□□□ -1.35
MATR3-228ENST00000620916 HDAC5Q9UQL6 1122 aa6.62□□□□□ -1.35
MATR3-228ENST00000620916 ZMYM3Q14202 1370 aa6.62□□□□□ -1.35
MATR3-228ENST00000620916 PSMD1Q99460 953 aa6.62□□□□□ -1.35
MATR3-228ENST00000620916 ARHGAP5Q13017 1502 aa6.62□□□□□ -1.35
MATR3-228ENST00000620916 MED14O60244 1454 aa6.62□□□□□ -1.35
MATR3-228ENST00000620916 CASKIN1Q8WXD9 1431 aa6.61□□□□□ -1.35
MATR3-228ENST00000620916 PREX2Q70Z35 1606 aa6.61□□□□□ -1.35
MATR3-228ENST00000620916 CC2D2BQ6DHV5 1058 aa6.61□□□□□ -1.35
MATR3-228ENST00000620916 RASEFQ8IZ41 740 aa6.61□□□□□ -1.35
MATR3-228ENST00000620916 PLEKHH2Q8IVE3 1493 aa6.61□□□□□ -1.35
MATR3-228ENST00000620916 GOLGA6L3A6NEY3 463 aa6.61□□□□□ -1.35
MATR3-228ENST00000620916 HSPA1LP34931 641 aa6.61□□□□□ -1.35
MATR3-228ENST00000620916 ZNF335Q9H4Z2 1342 aaPredicted RBP6.6□□□□□ -1.35
MATR3-228ENST00000620916 FRAT1Q92837 279 aaPredicted RBP6.6□□□□□ -1.35
MATR3-228ENST00000620916 KIDINS220Q9ULH0 1771 aa6.6□□□□□ -1.35
MATR3-228ENST00000620916 GTPBP4Q9BZE4 634 aaKnown RBP6.6□□□□□ -1.35
MATR3-228ENST00000620916 ZC3H13Q5T200 1668 aaKnown RBP6.6□□□□□ -1.35
MATR3-228ENST00000620916 RNF17Q9BXT8 1623 aaKnown RBP6.59□□□□□ -1.35
MATR3-228ENST00000620916 NBPF20Q3BBV1 942 aa6.59□□□□□ -1.35
MATR3-228ENST00000620916 VPS8Q8N3P4 1428 aa6.59□□□□□ -1.35
MATR3-228ENST00000620916 KIAA1107Q9UPP5 1409 aa6.59□□□□□ -1.35
MATR3-228ENST00000620916 LETM1O95202 739 aaPredicted RBP6.59□□□□□ -1.35
MATR3-228ENST00000620916 SLC52A1Q9NWF4 448 aa6.59□□□□□ -1.35
MATR3-228ENST00000620916 ADGRL2O95490 1459 aa6.59□□□□□ -1.35
MATR3-228ENST00000620916 C1QBPQ07021 282 aaKnown RBP6.59□□□□□ -1.36
MATR3-228ENST00000620916 TMED8Q6PL24 325 aaPredicted RBP6.59□□□□□ -1.36
MATR3-228ENST00000620916 FAM43BQ6ZT52 329 aaPredicted RBP6.59□□□□□ -1.36
MATR3-228ENST00000620916 P3H3Q8IVL6 736 aa6.59□□□□□ -1.36
MATR3-228ENST00000620916 DCAF11Q8TEB1 546 aa6.59□□□□□ -1.36
MATR3-228ENST00000620916 DNMT1P26358 1616 aaKnown RBP6.58□□□□□ -1.36
MATR3-228ENST00000620916 UNC13BO14795 1591 aa6.58□□□□□ -1.36
MATR3-228ENST00000620916 TNNT2P45379 298 aaPredicted RBP6.58□□□□□ -1.36
MATR3-228ENST00000620916 DNAJC2Q99543 621 aaKnown RBP6.58□□□□□ -1.36
MATR3-228ENST00000620916 LAS1LQ9Y4W2 734 aaKnown RBP6.58□□□□□ -1.36
MATR3-228ENST00000620916 KIAA1210Q9ULL0 1709 aa6.58□□□□□ -1.36
MATR3-228ENST00000620916 NCKAP5LQ9HCH0 1330 aa6.58□□□□□ -1.36
MATR3-228ENST00000620916 VWDEQ8N2E2 1590 aa6.58□□□□□ -1.36
MATR3-228ENST00000620916 NLRP1Q9C000 1473 aa6.58□□□□□ -1.36
MATR3-228ENST00000620916 CDC42BPBQ9Y5S2 1711 aa6.58□□□□□ -1.36
MATR3-228ENST00000620916 ARID3CA6NKF2 412 aa6.58□□□□□ -1.36
MATR3-228ENST00000620916 L1TD1Q5T7N2 865 aaKnown RBP6.58□□□□□ -1.36
MATR3-228ENST00000620916 GEMIN8Q9NWZ8 242 aaKnown RBP6.58□□□□□ -1.36
MATR3-228ENST00000620916 MAFGO15525 162 aa6.57□□□□□ -1.36
MATR3-228ENST00000620916 SLC24A3Q9HC58 644 aa6.57□□□□□ -1.36
MATR3-228ENST00000620916 SAMD9LQ8IVG5 1584 aa6.57□□□□□ -1.36
MATR3-228ENST00000620916 AFAP1Q8N556 730 aa6.57□□□□□ -1.36
MATR3-228ENST00000620916 NEUROD2Q15784 382 aa6.56□□□□□ -1.36
MATR3-228ENST00000620916 CARD10Q9BWT7 1032 aa6.56□□□□□ -1.36
MATR3-228ENST00000620916 CDK13Q14004 1512 aaKnown RBP6.56□□□□□ -1.36
MATR3-228ENST00000620916 CLTCQ00610 1675 aaKnown RBP6.56□□□□□ -1.36
MATR3-228ENST00000620916 SEMA3EO15041 775 aa6.56□□□□□ -1.36
MATR3-228ENST00000620916 INO80Q9ULG1 1556 aaPredicted RBP6.56□□□□□ -1.36
MATR3-228ENST00000620916 ALKQ9UM73 1620 aa6.56□□□□□ -1.36
MATR3-228ENST00000620916 A2MP01023 1474 aa6.55□□□□□ -1.36
MATR3-228ENST00000620916 RTEL1-TNFRSF6BF6WH68 1400 aa6.55□□□□□ -1.36
MATR3-228ENST00000620916 ANKLE2Q86XL3 938 aa6.55□□□□□ -1.36
MATR3-228ENST00000620916 CLEC11AQ9Y240 323 aa6.55□□□□□ -1.36
MATR3-228ENST00000620916 PATL2C9JE40 543 aaKnown RBP6.55□□□□□ -1.36
MATR3-228ENST00000620916 CCER2I3L3R5 266 aa6.55□□□□□ -1.36
MATR3-228ENST00000620916 THEMISQ8N1K5 641 aaPredicted RBP6.55□□□□□ -1.36
MATR3-228ENST00000620916 ATP7AQ04656 1500 aa6.55□□□□□ -1.36
MATR3-228ENST00000620916 FAM135BQ49AJ0 1406 aa6.55□□□□□ -1.36
MATR3-228ENST00000620916 CEP162Q5TB80 1403 aa6.55□□□□□ -1.36
MATR3-228ENST00000620916 MIA2Q96PC5 1412 aa6.55□□□□□ -1.36
MATR3-228ENST00000620916 MNX1P50219 401 aaPredicted RBP6.54□□□□□ -1.36
MATR3-228ENST00000620916 RALBP1Q15311 655 aa6.54□□□□□ -1.36
MATR3-228ENST00000620916 CDC42BPAQ5VT25 1732 aa6.54□□□□□ -1.36
MATR3-228ENST00000620916 PZPP20742 1482 aa6.54□□□□□ -1.36
MATR3-228ENST00000620916 LRRC9Q6ZRR7 1453 aa6.54□□□□□ -1.36
MATR3-228ENST00000620916 NPHP4O75161 1426 aaPredicted RBP6.54□□□□□ -1.36
MATR3-228ENST00000620916 ARHGAP35Q9NRY4 1499 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms