RNA–Protein interactions for RNA: ENST00000620876.4

LINC02028-220, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 5

Gene LINC02028, Length 476 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-220ENST00000620876 VGFO15240 615 aaPredicted RBP23.49■■□□□ 1.35
LINC02028-220ENST00000620876 EP400Q96L91 3159 aa23.48■■□□□ 1.35
LINC02028-220ENST00000620876 NGLY1Q96IV0 654 aa23.48■■□□□ 1.35
LINC02028-220ENST00000620876 RPGRIP1LQ68CZ1 1315 aa23.48■■□□□ 1.35
LINC02028-220ENST00000620876 BCL9LQ86UU0 1499 aa23.47■■□□□ 1.35
LINC02028-220ENST00000620876 MARF1Q9Y4F3 1742 aaKnown RBP23.47■■□□□ 1.35
LINC02028-220ENST00000620876 TECPR2O15040 1411 aa23.46■■□□□ 1.35
LINC02028-220ENST00000620876 IFT172Q9UG01 1749 aa23.45■■□□□ 1.34
LINC02028-220ENST00000620876 USP21Q9UK80 565 aa23.44■■□□□ 1.34
LINC02028-220ENST00000620876 ATAD2Q6PL18 1390 aa23.43■■□□□ 1.34
LINC02028-220ENST00000620876 KNDC1Q76NI1 1749 aa23.42■■□□□ 1.34
LINC02028-220ENST00000620876 SPATA31E1Q6ZUB1 1445 aa23.42■■□□□ 1.34
LINC02028-220ENST00000620876 TRPC5Q9UL62 973 aaPredicted RBP23.41■■□□□ 1.34
LINC02028-220ENST00000620876 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.4■■□□□ 1.34
LINC02028-220ENST00000620876 ADGRF5Q8IZF2 1346 aa23.39■■□□□ 1.34
LINC02028-220ENST00000620876 NPHP3Q7Z494 1330 aa23.38■■□□□ 1.33
LINC02028-220ENST00000620876 FMN2Q9NZ56 1722 aa23.38■■□□□ 1.33
LINC02028-220ENST00000620876 PLEKHH1Q9ULM0 1364 aa23.37■■□□□ 1.33
LINC02028-220ENST00000620876 GLI3P10071 1580 aa23.36■■□□□ 1.33
LINC02028-220ENST00000620876 LRPPRCP42704 1394 aaKnown RBP23.36■■□□□ 1.33
LINC02028-220ENST00000620876 SLIT2O94813 1529 aa23.35■■□□□ 1.33
LINC02028-220ENST00000620876 SLC4A1APQ9BWU0 796 aaKnown RBP23.35■■□□□ 1.33
LINC02028-220ENST00000620876 PIK3C2GO75747 1445 aa23.34■■□□□ 1.33
LINC02028-220ENST00000620876 ESCO1Q5FWF5 840 aa23.34■■□□□ 1.33
LINC02028-220ENST00000620876 ABCC11Q96J66 1382 aa23.34■■□□□ 1.33
LINC02028-220ENST00000620876 FOXD1Q16676 465 aa23.33■■□□□ 1.33
LINC02028-220ENST00000620876 FOXO3O43524 673 aa23.32■■□□□ 1.32
LINC02028-220ENST00000620876 XPCQ01831 940 aaPredicted RBP23.32■■□□□ 1.32
LINC02028-220ENST00000620876 WAPLQ7Z5K2 1190 aa23.32■■□□□ 1.32
LINC02028-220ENST00000620876 KIF1AQ12756 1690 aa23.32■■□□□ 1.32
LINC02028-220ENST00000620876 USP32Q8NFA0 1604 aa23.31■■□□□ 1.32
LINC02028-220ENST00000620876 CCDC144AA2RUR9 1427 aa23.29■■□□□ 1.32
LINC02028-220ENST00000620876 RALGAPBQ86X10 1494 aa23.29■■□□□ 1.32
LINC02028-220ENST00000620876 ANKRD30BQ9BXX2 1392 aa23.28■■□□□ 1.32
LINC02028-220ENST00000620876 GJD4Q96KN9 370 aaPredicted RBP23.28■■□□□ 1.32
LINC02028-220ENST00000620876 SPATA31A3Q5VYP0 1347 aa23.28■■□□□ 1.32
LINC02028-220ENST00000620876 NRXN1Q9ULB1 1477 aa23.27■■□□□ 1.32
LINC02028-220ENST00000620876 ABCA3Q99758 1704 aa23.27■■□□□ 1.32
LINC02028-220ENST00000620876 YTHDC2Q9H6S0 1430 aaKnown RBP23.26■■□□□ 1.31
LINC02028-220ENST00000620876 TMEM132EQ6IEE7 984 aa23.25■■□□□ 1.31
LINC02028-220ENST00000620876 BRWD3Q6RI45 1802 aa23.24■■□□□ 1.31
LINC02028-220ENST00000620876 NUTM2FA1L443 756 aa23.24■■□□□ 1.31
LINC02028-220ENST00000620876 STK26Q9P289 416 aa23.24■■□□□ 1.31
LINC02028-220ENST00000620876 RGPD8O14715 1765 aaPredicted RBP23.23■■□□□ 1.31
LINC02028-220ENST00000620876 CCDC125Q86Z20 511 aa23.22■■□□□ 1.31
LINC02028-220ENST00000620876 UNC5CLQ8IV45 518 aa23.22■■□□□ 1.31
LINC02028-220ENST00000620876 PLCH1Q4KWH8 1693 aa23.22■■□□□ 1.31
LINC02028-220ENST00000620876 RGL3Q3MIN7 710 aa23.21■■□□□ 1.31
LINC02028-220ENST00000620876 TNS3Q68CZ2 1445 aa23.21■■□□□ 1.31
LINC02028-220ENST00000620876 SIRT1Q96EB6 747 aa23.2■■□□□ 1.3
LINC02028-220ENST00000620876 NWD2Q9ULI1 1742 aa23.19■■□□□ 1.3
LINC02028-220ENST00000620876 BLMP54132 1417 aaPredicted RBP23.19■■□□□ 1.3
LINC02028-220ENST00000620876 ZRANB1Q9UGI0 708 aa23.19■■□□□ 1.3
LINC02028-220ENST00000620876 MPHOSPH9Q99550 1183 aa23.17■■□□□ 1.3
LINC02028-220ENST00000620876 ADGRB2O60241 1585 aa23.16■■□□□ 1.3
LINC02028-220ENST00000620876 KRT28Q7Z3Y7 464 aa23.16■■□□□ 1.3
LINC02028-220ENST00000620876 C14orf93Q9H972 538 aaKnown RBP23.16■■□□□ 1.3
LINC02028-220ENST00000620876 NRAPQ86VF7 1730 aa23.15■■□□□ 1.3
LINC02028-220ENST00000620876 SBNO1A3KN83 1393 aa23.14■■□□□ 1.3
LINC02028-220ENST00000620876 TRPM3Q9HCF6 1732 aaPredicted RBP23.14■■□□□ 1.3
LINC02028-220ENST00000620876 ONECUT3O60422 494 aaPredicted RBP23.14■■□□□ 1.29
LINC02028-220ENST00000620876 DLC1Q96QB1 1528 aa23.13■■□□□ 1.29
LINC02028-220ENST00000620876 ADGRB1O14514 1584 aa23.13■■□□□ 1.29
LINC02028-220ENST00000620876 VPS72Q15906 364 aa23.12■■□□□ 1.29
LINC02028-220ENST00000620876 PHF8Q9UPP1 1060 aa23.12■■□□□ 1.29
LINC02028-220ENST00000620876 CABLES1Q8TDN4 633 aa23.11■■□□□ 1.29
LINC02028-220ENST00000620876 ALS2Q96Q42 1657 aa23.1■■□□□ 1.29
LINC02028-220ENST00000620876 DEFB132Q7Z7B7 95 aa23.1■■□□□ 1.29
LINC02028-220ENST00000620876 CRYBG1Q9Y4K1 1723 aa23.1■■□□□ 1.29
LINC02028-220ENST00000620876 ANKARQ7Z5J8 1434 aa23.09■■□□□ 1.29
LINC02028-220ENST00000620876 LRP5O75197 1615 aa23.09■■□□□ 1.29
LINC02028-220ENST00000620876 CFAP70Q5T0N1 1121 aa23.09■■□□□ 1.29
LINC02028-220ENST00000620876 SEPT12Q8IYM1 358 aa23.09■■□□□ 1.29
LINC02028-220ENST00000620876 ARHGEF10O15013 1369 aa23.06■■□□□ 1.28
LINC02028-220ENST00000620876 DHX57Q6P158 1386 aaKnown RBP23.05■■□□□ 1.28
LINC02028-220ENST00000620876 PRAM1Q96QH2 718 aa23.05■■□□□ 1.28
LINC02028-220ENST00000620876 FAM83GA6ND36 823 aa23.03■■□□□ 1.28
LINC02028-220ENST00000620876 PSME1Q06323 249 aa23.03■■□□□ 1.28
LINC02028-220ENST00000620876 PRR36Q9H6K5 1346 aa23.02■■□□□ 1.28
LINC02028-220ENST00000620876 THSD7AQ9UPZ6 1657 aa23.01■■□□□ 1.27
LINC02028-220ENST00000620876 COL14A1Q05707 1796 aaKnown RBP23.01■■□□□ 1.27
LINC02028-220ENST00000620876 TULP4Q9NRJ4 1543 aa23■■□□□ 1.27
LINC02028-220ENST00000620876 SAFB2Q14151 953 aaKnown RBP eCLIP23■■□□□ 1.27
LINC02028-220ENST00000620876 KRT27Q7Z3Y8 459 aa22.99■■□□□ 1.27
LINC02028-220ENST00000620876 PMFBP1Q8TBY8 1022 aa22.98■■□□□ 1.27
LINC02028-220ENST00000620876 TNS1Q9HBL0 1735 aaKnown RBP22.96■■□□□ 1.27
LINC02028-220ENST00000620876 HAP1P54257 671 aaPredicted RBP22.95■■□□□ 1.26
LINC02028-220ENST00000620876 ACIN1Q9UKV3 1341 aaKnown RBP22.95■■□□□ 1.26
LINC02028-220ENST00000620876 PLEKHG5O94827 1062 aa22.94■■□□□ 1.26
LINC02028-220ENST00000620876 RGPD1P0DJD0 1748 aa22.94■■□□□ 1.26
LINC02028-220ENST00000620876 DISP2A7MBM2 1401 aa22.93■■□□□ 1.26
LINC02028-220ENST00000620876 FAM98CQ17RN3 349 aaKnown RBP22.92■■□□□ 1.26
LINC02028-220ENST00000620876 LMOD2Q6P5Q4 547 aa22.92■■□□□ 1.26
LINC02028-220ENST00000620876 BTG4Q9NY30 223 aa22.92■■□□□ 1.26
LINC02028-220ENST00000620876 ATP7BP35670 1465 aa22.92■■□□□ 1.26
LINC02028-220ENST00000620876 SPATA31A5Q5VU36 1347 aa22.91■■□□□ 1.26
LINC02028-220ENST00000620876 SPATA31A7Q8IWB4 1347 aa22.91■■□□□ 1.26
LINC02028-220ENST00000620876 HIRIP3Q9BW71 556 aaPredicted RBP22.91■■□□□ 1.26
LINC02028-220ENST00000620876 CCDC9Q9Y3X0 531 aaKnown RBP22.91■■□□□ 1.26
LINC02028-220ENST00000620876 ARHGEF28Q8N1W1 1705 aaKnown RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms