RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 C6orf229H3BNL8 230 aa7.27□□□□□ -1.25
MALAT1-216ENST00000620465 HRCP23327 699 aa7.27□□□□□ -1.25
MALAT1-216ENST00000620465 RFC5P40937 340 aa7.27□□□□□ -1.25
MALAT1-216ENST00000620465 PTPN5P54829 565 aa7.27□□□□□ -1.25
MALAT1-216ENST00000620465 RNF166Q96A37 237 aaPredicted RBP7.27□□□□□ -1.25
MALAT1-216ENST00000620465 SLC27A5Q9Y2P5 690 aa7.27□□□□□ -1.25
MALAT1-216ENST00000620465 FLIIQ13045 1269 aa7.26□□□□□ -1.25
MALAT1-216ENST00000620465 TMEM259Q4ZIN3 620 aa7.26□□□□□ -1.25
MALAT1-216ENST00000620465 FBXO31Q5XUX0 539 aaPredicted RBP7.26□□□□□ -1.25
MALAT1-216ENST00000620465 BLOC1S3Q6QNY0 202 aa7.26□□□□□ -1.25
MALAT1-216ENST00000620465 SPNS2Q8IVW8 549 aa7.26□□□□□ -1.25
MALAT1-216ENST00000620465 C14orf37Q86TY3 774 aa7.25□□□□□ -1.25
MALAT1-216ENST00000620465 RTL5Q5HYW3 569 aaPredicted RBP7.24□□□□□ -1.25
MALAT1-216ENST00000620465 RETREG3Q86VR2 466 aa7.24□□□□□ -1.25
MALAT1-216ENST00000620465 SCUBE3Q8IX30 993 aa7.24□□□□□ -1.25
MALAT1-216ENST00000620465 BANK1Q8NDB2 785 aa7.24□□□□□ -1.25
MALAT1-216ENST00000620465 HELBQ8NG08 1087 aaPredicted RBP7.24□□□□□ -1.25
MALAT1-216ENST00000620465 SALL2Q9Y467 1007 aaPredicted RBP7.24□□□□□ -1.25
MALAT1-216ENST00000620465 COPS2P61201 443 aa7.23□□□□□ -1.25
MALAT1-216ENST00000620465 MCM6Q14566 821 aa7.23□□□□□ -1.25
MALAT1-216ENST00000620465 RNF19BQ6ZMZ0 732 aa7.23□□□□□ -1.25
MALAT1-216ENST00000620465 SYMPKQ92797 1274 aaKnown RBP7.23□□□□□ -1.25
MALAT1-216ENST00000620465 MTRQ99707 1265 aa7.23□□□□□ -1.25
MALAT1-216ENST00000620465 HCSTQ9UBK5 93 aa7.23□□□□□ -1.25
MALAT1-216ENST00000620465 TIMELESSQ9UNS1 1208 aa7.23□□□□□ -1.25
MALAT1-216ENST00000620465 CFAP99D6REC4 459 aa7.22□□□□□ -1.25
MALAT1-216ENST00000620465 AP1G2O75843 785 aa7.22□□□□□ -1.25
MALAT1-216ENST00000620465 FMNL1O95466 1100 aaPredicted RBP7.22□□□□□ -1.25
MALAT1-216ENST00000620465 BRICD5Q6PL45 260 aa7.22□□□□□ -1.25
MALAT1-216ENST00000620465 PRR7Q8TB68 274 aa7.22□□□□□ -1.25
MALAT1-216ENST00000620465 THAP11Q96EK4 314 aa7.21□□□□□ -1.26
MALAT1-216ENST00000620465 USB1Q9BQ65 265 aaKnown RBP7.21□□□□□ -1.26
MALAT1-216ENST00000620465 ZPR1O75312 459 aa7.2□□□□□ -1.26
MALAT1-216ENST00000620465 USP17L8P0C7I0 530 aa7.2□□□□□ -1.26
MALAT1-216ENST00000620465 TSC1Q92574 1164 aa7.2□□□□□ -1.26
MALAT1-216ENST00000620465 IL21Q9HBE4 155 aa7.2□□□□□ -1.26
MALAT1-216ENST00000620465 APBB1O00213 710 aa7.19□□□□□ -1.26
MALAT1-216ENST00000620465 TLL1O43897 1013 aa7.19□□□□□ -1.26
MALAT1-216ENST00000620465 TJAP1Q5JTD0 557 aa7.19□□□□□ -1.26
MALAT1-216ENST00000620465 DESI1Q6ICB0 168 aa7.19□□□□□ -1.26
MALAT1-216ENST00000620465 SPSB2Q99619 263 aa7.19□□□□□ -1.26
MALAT1-216ENST00000620465 SOCS7O14512 581 aa7.18□□□□□ -1.26
MALAT1-216ENST00000620465 ADH1BP00325 375 aa7.18□□□□□ -1.26
MALAT1-216ENST00000620465 MSS51Q4VC12 460 aa7.18□□□□□ -1.26
MALAT1-216ENST00000620465 SNRKQ9NRH2 765 aa7.18□□□□□ -1.26
MALAT1-216ENST00000620465 UBTFP17480 764 aaKnown RBP7.17□□□□□ -1.26
MALAT1-216ENST00000620465 MTMR14Q8NCE2 650 aa7.17□□□□□ -1.26
MALAT1-216ENST00000620465 JUNDP17535 347 aa7.16□□□□□ -1.26
MALAT1-216ENST00000620465 CTDSPL2Q05D32 466 aa7.16□□□□□ -1.26
MALAT1-216ENST00000620465 MMRN1Q13201 1228 aa7.16□□□□□ -1.26
MALAT1-216ENST00000620465 ZNF516Q92618 1163 aa7.15□□□□□ -1.26
MALAT1-216ENST00000620465 DXOO77932 396 aaKnown RBP7.14□□□□□ -1.27
MALAT1-216ENST00000620465 ITGBL1O95965 494 aaPredicted RBP7.14□□□□□ -1.27
MALAT1-216ENST00000620465 PTPRNQ16849 979 aa7.14□□□□□ -1.27
MALAT1-216ENST00000620465 LYPD8Q6UX82 237 aa7.14□□□□□ -1.27
MALAT1-216ENST00000620465 FAM160A2Q8N612 972 aaPredicted RBP7.14□□□□□ -1.27
MALAT1-216ENST00000620465 PRDM9Q9NQV7 894 aa7.14□□□□□ -1.27
MALAT1-216ENST00000620465 PER1O15534 1290 aaPredicted RBP7.13□□□□□ -1.27
MALAT1-216ENST00000620465 RAD21O60216 631 aa7.13□□□□□ -1.27
MALAT1-216ENST00000620465 MMP16P51512 607 aa7.13□□□□□ -1.27
MALAT1-216ENST00000620465 KCNC4Q03721 635 aa7.13□□□□□ -1.27
MALAT1-216ENST00000620465 LRRN4Q8WUT4 740 aa7.13□□□□□ -1.27
MALAT1-216ENST00000620465 SLC6A16Q9GZN6 736 aa7.13□□□□□ -1.27
MALAT1-216ENST00000620465 PRM3Q9NNZ6 103 aa7.13□□□□□ -1.27
MALAT1-216ENST00000620465 HMX1Q9NP08 348 aaPredicted RBP7.13□□□□□ -1.27
MALAT1-216ENST00000620465 ZMYND15Q9H091 742 aa7.12□□□□□ -1.27
MALAT1-216ENST00000620465 CCNYL3P0C7X3 344 aa7.11□□□□□ -1.27
MALAT1-216ENST00000620465 NKX2-3Q8TAU0 364 aa7.11□□□□□ -1.27
MALAT1-216ENST00000620465 GJD4Q96KN9 370 aaPredicted RBP7.11□□□□□ -1.27
MALAT1-216ENST00000620465 COG6Q9Y2V7 657 aa7.11□□□□□ -1.27
MALAT1-216ENST00000620465 NDUFB9Q9Y6M9 179 aa7.11□□□□□ -1.27
MALAT1-216ENST00000620465 A6NJR5 290 aa7.1□□□□□ -1.27
MALAT1-216ENST00000620465 S1PR4O95977 384 aa7.1□□□□□ -1.27
MALAT1-216ENST00000620465 CLUAP1Q96AJ1 413 aa7.1□□□□□ -1.27
MALAT1-216ENST00000620465 POM121Q96HA1 1249 aa7.1□□□□□ -1.27
MALAT1-216ENST00000620465 NUDT12Q9BQG2 462 aa7.1□□□□□ -1.27
MALAT1-216ENST00000620465 TRIM34Q9BYJ4 488 aa7.1□□□□□ -1.27
MALAT1-216ENST00000620465 F12P00748 615 aaPredicted RBP7.09□□□□□ -1.27
MALAT1-216ENST00000620465 PNMA1Q8ND90 353 aa7.09□□□□□ -1.27
MALAT1-216ENST00000620465 GDPD2Q9HCC8 539 aa7.09□□□□□ -1.27
MALAT1-216ENST00000620465 TBC1D2BQ9UPU7 963 aa7.09□□□□□ -1.27
MALAT1-216ENST00000620465 NR6A1Q15406 480 aa7.08□□□□□ -1.28
MALAT1-216ENST00000620465 PROSER2Q86WR7 435 aaPredicted RBP7.08□□□□□ -1.28
MALAT1-216ENST00000620465 MAP10Q9P2G4 905 aa7.08□□□□□ -1.28
MALAT1-216ENST00000620465 CTHP32929 405 aa7.07□□□□□ -1.28
MALAT1-216ENST00000620465 GGCXP38435 758 aa7.07□□□□□ -1.28
MALAT1-216ENST00000620465 ABL2P42684 1182 aa7.07□□□□□ -1.28
MALAT1-216ENST00000620465 WWC1Q8IX03 1113 aa7.07□□□□□ -1.28
MALAT1-216ENST00000620465 EPS8L1Q8TE68 723 aa7.07□□□□□ -1.28
MALAT1-216ENST00000620465 KCNH2Q12809 1159 aa7.06□□□□□ -1.28
MALAT1-216ENST00000620465 EVA1BQ9NVM1 165 aa7.06□□□□□ -1.28
MALAT1-216ENST00000620465 FCF1Q9Y324 198 aaKnown RBP7.06□□□□□ -1.28
MALAT1-216ENST00000620465 CCDC24Q8N4L8 307 aa7.05□□□□□ -1.28
MALAT1-216ENST00000620465 ZC3H4Q9UPT8 1303 aaKnown RBP7.04□□□□□ -1.28
MALAT1-216ENST00000620465 GPR37L1O60883 481 aa7.04□□□□□ -1.28
MALAT1-216ENST00000620465 IFFO2Q5TF58 517 aa7.04□□□□□ -1.28
MALAT1-216ENST00000620465 ARMC2Q8NEN0 867 aa7.04□□□□□ -1.28
MALAT1-216ENST00000620465 FKBPLQ9UIM3 349 aa7.04□□□□□ -1.28
MALAT1-216ENST00000620465 RNF223E7ERA6 249 aa7.03□□□□□ -1.28
MALAT1-216ENST00000620465 TRAK2O60296 914 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms