RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 IFT172Q9UG01 1749 aa16.59■□□□□ 0.25
TARDBP-221ENST00000619555 ADAMTS2O95450 1211 aa16.58■□□□□ 0.24
TARDBP-221ENST00000619555 ESCO1Q5FWF5 840 aa16.58■□□□□ 0.24
TARDBP-221ENST00000619555 LRPPRCP42704 1394 aaKnown RBP16.58■□□□□ 0.24
TARDBP-221ENST00000619555 PLEKHH1Q9ULM0 1364 aa16.56■□□□□ 0.24
TARDBP-221ENST00000619555 NUTM2FA1L443 756 aa16.56■□□□□ 0.24
TARDBP-221ENST00000619555 NGLY1Q96IV0 654 aa16.56■□□□□ 0.24
TARDBP-221ENST00000619555 QTRT2Q9H974 415 aaKnown RBP16.56■□□□□ 0.24
TARDBP-221ENST00000619555 TECPR2O15040 1411 aa16.55■□□□□ 0.24
TARDBP-221ENST00000619555 PIK3C2GO75747 1445 aa16.55■□□□□ 0.24
TARDBP-221ENST00000619555 ABCC11Q96J66 1382 aa16.55■□□□□ 0.24
TARDBP-221ENST00000619555 UPF1Q92900 1129 aaKnown RBP eCLIP16.55■□□□□ 0.242e-11■■■□□ 15.1
TARDBP-221ENST00000619555 CDC42BPGQ6DT37 1551 aa16.55■□□□□ 0.24
TARDBP-221ENST00000619555 XPCQ01831 940 aaPredicted RBP16.54■□□□□ 0.24
TARDBP-221ENST00000619555 ACIN1Q9UKV3 1341 aaKnown RBP16.53■□□□□ 0.24
TARDBP-221ENST00000619555 FOXO3O43524 673 aa16.53■□□□□ 0.24
TARDBP-221ENST00000619555 C14orf93Q9H972 538 aaKnown RBP16.53■□□□□ 0.24
TARDBP-221ENST00000619555 YTHDC2Q9H6S0 1430 aaKnown RBP16.53■□□□□ 0.24
TARDBP-221ENST00000619555 NPHP3Q7Z494 1330 aa16.52■□□□□ 0.24
TARDBP-221ENST00000619555 RBM6P78332 1123 aaKnown RBP16.52■□□□□ 0.24
TARDBP-221ENST00000619555 CFAP70Q5T0N1 1121 aa16.52■□□□□ 0.24
TARDBP-221ENST00000619555 CDK12Q9NYV4 1490 aaPredicted RBP16.52■□□□□ 0.23
TARDBP-221ENST00000619555 RAB3GAP2Q9H2M9 1393 aa16.51■□□□□ 0.23
TARDBP-221ENST00000619555 KNDC1Q76NI1 1749 aa16.51■□□□□ 0.23
TARDBP-221ENST00000619555 PXDNQ92626 1479 aa16.5■□□□□ 0.23
TARDBP-221ENST00000619555 RGS12O14924 1447 aa16.49■□□□□ 0.23
TARDBP-221ENST00000619555 SIRT1Q96EB6 747 aa16.49■□□□□ 0.23
TARDBP-221ENST00000619555 USP21Q9UK80 565 aa16.49■□□□□ 0.23
TARDBP-221ENST00000619555 NRXN1Q9ULB1 1477 aa16.48■□□□□ 0.23
TARDBP-221ENST00000619555 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
TARDBP-221ENST00000619555 FNBP4Q8N3X1 1017 aaPredicted RBP16.47■□□□□ 0.23
TARDBP-221ENST00000619555 DHX57Q6P158 1386 aaKnown RBP16.47■□□□□ 0.23
TARDBP-221ENST00000619555 FMN2Q9NZ56 1722 aa16.47■□□□□ 0.23
TARDBP-221ENST00000619555 MYOM2P54296 1465 aa16.47■□□□□ 0.23
TARDBP-221ENST00000619555 SAFB2Q14151 953 aaKnown RBP eCLIP16.46■□□□□ 0.23
TARDBP-221ENST00000619555 PRAM1Q96QH2 718 aa16.45■□□□□ 0.22
TARDBP-221ENST00000619555 TRPC5Q9UL62 973 aaPredicted RBP16.45■□□□□ 0.22
TARDBP-221ENST00000619555 KRT28Q7Z3Y7 464 aa16.44■□□□□ 0.22
TARDBP-221ENST00000619555 RGPD8O14715 1765 aaPredicted RBP16.43■□□□□ 0.22
TARDBP-221ENST00000619555 KDM2AQ9Y2K7 1162 aa16.43■□□□□ 0.22
TARDBP-221ENST00000619555 SPATA31A3Q5VYP0 1347 aa16.43■□□□□ 0.22
TARDBP-221ENST00000619555 POGKQ9P215 609 aa16.42■□□□□ 0.22
TARDBP-221ENST00000619555 PHF8Q9UPP1 1060 aa16.42■□□□□ 0.22
TARDBP-221ENST00000619555 ATRNO75882 1429 aa16.42■□□□□ 0.22
TARDBP-221ENST00000619555 BCL9LQ86UU0 1499 aa16.41■□□□□ 0.22
TARDBP-221ENST00000619555 KIF1AQ12756 1690 aa16.4■□□□□ 0.22
TARDBP-221ENST00000619555 MARF1Q9Y4F3 1742 aaKnown RBP16.4■□□□□ 0.22
TARDBP-221ENST00000619555 TRAK1Q9UPV9 953 aa16.4■□□□□ 0.22
TARDBP-221ENST00000619555 DCAF11Q8TEB1 546 aa16.39■□□□□ 0.21
TARDBP-221ENST00000619555 PLEKHG5O94827 1062 aa16.38■□□□□ 0.21
TARDBP-221ENST00000619555 DLC1Q96QB1 1528 aa16.38■□□□□ 0.21
TARDBP-221ENST00000619555 ADGRB1O14514 1584 aa16.38■□□□□ 0.21
TARDBP-221ENST00000619555 HRCP23327 699 aa16.37■□□□□ 0.21
TARDBP-221ENST00000619555 PSME1Q06323 249 aa16.37■□□□□ 0.21
TARDBP-221ENST00000619555 PMFBP1Q8TBY8 1022 aa16.37■□□□□ 0.21
TARDBP-221ENST00000619555 CABLES1Q8TDN4 633 aa16.37■□□□□ 0.21
TARDBP-221ENST00000619555 HIRIP3Q9BW71 556 aaPredicted RBP16.37■□□□□ 0.21
TARDBP-221ENST00000619555 GJD4Q96KN9 370 aaPredicted RBP16.36■□□□□ 0.21
TARDBP-221ENST00000619555 ATAD2Q6PL18 1390 aa16.36■□□□□ 0.21
TARDBP-221ENST00000619555 LMOD2Q6P5Q4 547 aa16.35■□□□□ 0.21
TARDBP-221ENST00000619555 UNC5CLQ8IV45 518 aa16.35■□□□□ 0.21
TARDBP-221ENST00000619555 MINK1Q8N4C8 1332 aaPredicted RBP16.35■□□□□ 0.21
TARDBP-221ENST00000619555 TNS3Q68CZ2 1445 aa16.35■□□□□ 0.21
TARDBP-221ENST00000619555 USP32Q8NFA0 1604 aa16.34■□□□□ 0.21
TARDBP-221ENST00000619555 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
TARDBP-221ENST00000619555 SBNO1A3KN83 1393 aa16.34■□□□□ 0.21
TARDBP-221ENST00000619555 SLIT2O94813 1529 aa16.34■□□□□ 0.21
TARDBP-221ENST00000619555 ANKARQ7Z5J8 1434 aa16.33■□□□□ 0.2
TARDBP-221ENST00000619555 ADGRB2O60241 1585 aa16.32■□□□□ 0.2
TARDBP-221ENST00000619555 PRR36Q9H6K5 1346 aa16.32■□□□□ 0.2
TARDBP-221ENST00000619555 STAC3Q96MF2 364 aa16.31■□□□□ 0.2
TARDBP-221ENST00000619555 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.31■□□□□ 0.2
TARDBP-221ENST00000619555 RALGAPBQ86X10 1494 aa16.3■□□□□ 0.2
TARDBP-221ENST00000619555 WASLO00401 505 aaPredicted RBP16.3■□□□□ 0.2
TARDBP-221ENST00000619555 EP400Q96L91 3159 aa16.3■□□□□ 0.2
TARDBP-221ENST00000619555 GLI3P10071 1580 aa16.3■□□□□ 0.2
TARDBP-221ENST00000619555 ARHGEF10O15013 1369 aa16.29■□□□□ 0.2
TARDBP-221ENST00000619555 FAM83GA6ND36 823 aa16.28■□□□□ 0.2
TARDBP-221ENST00000619555 VPS72Q15906 364 aa16.27■□□□□ 0.2
TARDBP-221ENST00000619555 ABCA3Q99758 1704 aa16.27■□□□□ 0.19
TARDBP-221ENST00000619555 EIF3AQ14152 1382 aaKnown RBP16.26■□□□□ 0.19
TARDBP-221ENST00000619555 GPRASP1Q5JY77 1395 aa16.26■□□□□ 0.19
TARDBP-221ENST00000619555 TULP4Q9NRJ4 1543 aa16.26■□□□□ 0.19
TARDBP-221ENST00000619555 TRPM3Q9HCF6 1732 aaPredicted RBP16.26■□□□□ 0.19
TARDBP-221ENST00000619555 NGDNQ8NEJ9 315 aaKnown RBP16.26■□□□□ 0.19
TARDBP-221ENST00000619555 CCDC9Q9Y3X0 531 aaKnown RBP16.26■□□□□ 0.19
TARDBP-221ENST00000619555 SEPT12Q8IYM1 358 aa16.25■□□□□ 0.19
TARDBP-221ENST00000619555 ARHGEF28Q8N1W1 1705 aaKnown RBP16.25■□□□□ 0.19
TARDBP-221ENST00000619555 PLCH1Q4KWH8 1693 aa16.24■□□□□ 0.19
TARDBP-221ENST00000619555 BRWD3Q6RI45 1802 aa16.24■□□□□ 0.19
TARDBP-221ENST00000619555 NUDT16Q96DE0 195 aaKnown RBP16.24■□□□□ 0.19
TARDBP-221ENST00000619555 NWD2Q9ULI1 1742 aa16.23■□□□□ 0.19
TARDBP-221ENST00000619555 PAK3O75914 559 aaPredicted RBP16.23■□□□□ 0.19
TARDBP-221ENST00000619555 CCDC125Q86Z20 511 aa16.23■□□□□ 0.19
TARDBP-221ENST00000619555 ALS2Q96Q42 1657 aa16.23■□□□□ 0.19
TARDBP-221ENST00000619555 NBPF1Q3BBV0 1214 aa16.22■□□□□ 0.19
TARDBP-221ENST00000619555 CDK19Q9BWU1 502 aa16.22■□□□□ 0.19
TARDBP-221ENST00000619555 ONECUT3O60422 494 aaPredicted RBP16.21■□□□□ 0.19
TARDBP-221ENST00000619555 BTG4Q9NY30 223 aa16.21■□□□□ 0.19
TARDBP-221ENST00000619555 SRCAPQ6ZRS2 3230 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms