RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 L3MBTL2Q969R5 705 aa30.29■■■□□ 2.44
SGMS1-210ENST00000619438 TECPR2O15040 1411 aa30.28■■■□□ 2.44
SGMS1-210ENST00000619438 LAMC1P11047 1609 aa30.28■■■□□ 2.44
SGMS1-210ENST00000619438 SIRT1Q96EB6 747 aa30.28■■■□□ 2.44
SGMS1-210ENST00000619438 TRAK1Q9UPV9 953 aa30.27■■■□□ 2.44
SGMS1-210ENST00000619438 POGKQ9P215 609 aa30.27■■■□□ 2.44
SGMS1-210ENST00000619438 MST1RQ04912 1400 aa30.26■■■□□ 2.43
SGMS1-210ENST00000619438 SAFB2Q14151 953 aaKnown RBP eCLIP30.24■■■□□ 2.43
SGMS1-210ENST00000619438 BRINP3Q76B58 766 aa30.24■■■□□ 2.43
SGMS1-210ENST00000619438 KNDC1Q76NI1 1749 aa30.24■■■□□ 2.43
SGMS1-210ENST00000619438 PRAM1Q96QH2 718 aa30.23■■■□□ 2.43
SGMS1-210ENST00000619438 PLEKHH1Q9ULM0 1364 aa30.23■■■□□ 2.43
SGMS1-210ENST00000619438 COL16A1Q07092 1604 aaPredicted RBP30.2■■■□□ 2.43
SGMS1-210ENST00000619438 AHDC1Q5TGY3 1603 aaPredicted RBP30.18■■■□□ 2.42
SGMS1-210ENST00000619438 NUTM2FA1L443 756 aa30.17■■■□□ 2.42
SGMS1-210ENST00000619438 ADGRB1O14514 1584 aa30.16■■■□□ 2.42
SGMS1-210ENST00000619438 ILDR2Q71H61 639 aa30.16■■■□□ 2.42
SGMS1-210ENST00000619438 ORAI2Q96SN7 254 aa30.15■■■□□ 2.42
SGMS1-210ENST00000619438 C1orf167Q5SNV9 1468 aa30.15■■■□□ 2.42
SGMS1-210ENST00000619438 NBPF1Q3BBV0 1214 aa30.14■■■□□ 2.42
SGMS1-210ENST00000619438 ESCO1Q5FWF5 840 aa30.14■■■□□ 2.41
SGMS1-210ENST00000619438 NHSL1Q5SYE7 1610 aa30.13■■■□□ 2.41
SGMS1-210ENST00000619438 CDC42BPGQ6DT37 1551 aa30.12■■■□□ 2.41
SGMS1-210ENST00000619438 JCADQ9P266 1359 aa30.1■■■□□ 2.41
SGMS1-210ENST00000619438 DDX17Q92841 729 aaKnown RBP30.1■■■□□ 2.41
SGMS1-210ENST00000619438 PHF23Q9BUL5 403 aaPredicted RBP30.1■■■□□ 2.41
SGMS1-210ENST00000619438 DLC1Q96QB1 1528 aa30.1■■■□□ 2.41
SGMS1-210ENST00000619438 HIRIP3Q9BW71 556 aaPredicted RBP30.08■■■□□ 2.41
SGMS1-210ENST00000619438 MINK1Q8N4C8 1332 aaPredicted RBP30.08■■■□□ 2.41
SGMS1-210ENST00000619438 LRRC59Q96AG4 307 aaKnown RBP30.04■■■□□ 2.4
SGMS1-210ENST00000619438 SHPRHQ149N8 1683 aa30.04■■■□□ 2.4
SGMS1-210ENST00000619438 FMN2Q9NZ56 1722 aa30.02■■■□□ 2.4
SGMS1-210ENST00000619438 KIAA1210Q9ULL0 1709 aa30.02■■■□□ 2.4
SGMS1-210ENST00000619438 FOXO3O43524 673 aa30.01■■■□□ 2.39
SGMS1-210ENST00000619438 YTHDC1Q96MU7 727 aaKnown RBP29.98■■■□□ 2.39
SGMS1-210ENST00000619438 RGPD8O14715 1765 aaPredicted RBP29.98■■■□□ 2.39
SGMS1-210ENST00000619438 ROCK2O75116 1388 aaKnown RBP29.98■■■□□ 2.39
SGMS1-210ENST00000619438 NBPF8Q3BBV2 869 aa29.98■■■□□ 2.39
SGMS1-210ENST00000619438 NPHP3Q7Z494 1330 aa29.97■■■□□ 2.39
SGMS1-210ENST00000619438 WASLO00401 505 aaPredicted RBP29.97■■■□□ 2.39
SGMS1-210ENST00000619438 SPATA31A6Q5VVP1 1343 aa29.95■■■□□ 2.39
SGMS1-210ENST00000619438 DDX10Q13206 875 aaKnown RBP29.95■■■□□ 2.38
SGMS1-210ENST00000619438 PHF8Q9UPP1 1060 aa29.95■■■□□ 2.38
SGMS1-210ENST00000619438 LRP6O75581 1613 aa29.94■■■□□ 2.38
SGMS1-210ENST00000619438 RGS17Q9UGC6 210 aaPredicted RBP29.94■■■□□ 2.38
SGMS1-210ENST00000619438 ARHGEF28Q8N1W1 1705 aaKnown RBP29.94■■■□□ 2.38
SGMS1-210ENST00000619438 XPCQ01831 940 aaPredicted RBP29.93■■■□□ 2.38
SGMS1-210ENST00000619438 SOS2Q07890 1332 aaPredicted RBP29.93■■■□□ 2.38
SGMS1-210ENST00000619438 CENPJQ9HC77 1338 aaPredicted RBP29.92■■■□□ 2.38
SGMS1-210ENST00000619438 NUTM2BA6NNL0 878 aaPredicted RBP29.91■■■□□ 2.38
SGMS1-210ENST00000619438 NUTM2EB1AL46 878 aaPredicted RBP29.91■■■□□ 2.38
SGMS1-210ENST00000619438 NUTM2AQ8IVF1 878 aaPredicted RBP29.91■■■□□ 2.38
SGMS1-210ENST00000619438 EIF3AQ14152 1382 aaKnown RBP29.91■■■□□ 2.38
SGMS1-210ENST00000619438 PMFBP1Q8TBY8 1022 aa29.9■■■□□ 2.38
SGMS1-210ENST00000619438 MEX3CQ5U5Q3 659 aaKnown RBP29.89■■■□□ 2.38
SGMS1-210ENST00000619438 CDK19Q9BWU1 502 aa29.89■■■□□ 2.38
SGMS1-210ENST00000619438 ADGRB2O60241 1585 aa29.89■■■□□ 2.37
SGMS1-210ENST00000619438 CARD11Q9BXL7 1154 aa29.88■■■□□ 2.37
SGMS1-210ENST00000619438 TRPM1Q7Z4N2 1603 aa29.87■■■□□ 2.37
SGMS1-210ENST00000619438 PNPLA6Q8IY17 1366 aa29.87■■■□□ 2.37
SGMS1-210ENST00000619438 PSME1Q06323 249 aa29.87■■■□□ 2.37
SGMS1-210ENST00000619438 KRT28Q7Z3Y7 464 aa29.87■■■□□ 2.37
SGMS1-210ENST00000619438 ANKARQ7Z5J8 1434 aa29.86■■■□□ 2.37
SGMS1-210ENST00000619438 KIF1AQ12756 1690 aa29.86■■■□□ 2.37
SGMS1-210ENST00000619438 NUDT16Q96DE0 195 aaKnown RBP29.85■■■□□ 2.37
SGMS1-210ENST00000619438 USP32Q8NFA0 1604 aa29.84■■■□□ 2.37
SGMS1-210ENST00000619438 PXDNQ92626 1479 aa29.84■■■□□ 2.37
SGMS1-210ENST00000619438 EIF4G2P78344 907 aaKnown RBP eCLIP29.83■■■□□ 2.375e-9■■■□□ 17.2
SGMS1-210ENST00000619438 PRR36Q9H6K5 1346 aa29.83■■■□□ 2.37
SGMS1-210ENST00000619438 SRPK2P78362 688 aaKnown RBP29.82■■■□□ 2.36
SGMS1-210ENST00000619438 GTF3C3Q9Y5Q9 886 aa29.82■■■□□ 2.36
SGMS1-210ENST00000619438 SOCS7O14512 581 aa29.81■■■□□ 2.36
SGMS1-210ENST00000619438 HSPA5P11021 654 aaKnown RBP29.81■■■□□ 2.36
SGMS1-210ENST00000619438 NGDNQ8NEJ9 315 aaKnown RBP29.81■■■□□ 2.36
SGMS1-210ENST00000619438 TULP4Q9NRJ4 1543 aa29.8■■■□□ 2.36
SGMS1-210ENST00000619438 POTEAQ6S8J7 498 aa29.79■■■□□ 2.36
SGMS1-210ENST00000619438 GPRASP1Q5JY77 1395 aa29.78■■■□□ 2.36
SGMS1-210ENST00000619438 LMOD2Q6P5Q4 547 aa29.77■■■□□ 2.36
SGMS1-210ENST00000619438 CCDC61Q9Y6R9 512 aa29.77■■■□□ 2.36
SGMS1-210ENST00000619438 CABP2Q9NPB3 220 aa29.76■■■□□ 2.36
SGMS1-210ENST00000619438 CCER2I3L3R5 266 aa29.76■■■□□ 2.35
SGMS1-210ENST00000619438 COL22A1Q8NFW1 1626 aaPredicted RBP29.75■■■□□ 2.35
SGMS1-210ENST00000619438 SPATA31A3Q5VYP0 1347 aa29.75■■■□□ 2.35
SGMS1-210ENST00000619438 RALGAPBQ86X10 1494 aa29.74■■■□□ 2.35
SGMS1-210ENST00000619438 ADAMTS2O95450 1211 aa29.74■■■□□ 2.35
SGMS1-210ENST00000619438 EVC2Q86UK5 1308 aa29.74■■■□□ 2.35
SGMS1-210ENST00000619438 ANP32CO43423 234 aa29.71■■■□□ 2.35
SGMS1-210ENST00000619438 PLEKHG5O94827 1062 aa29.7■■■□□ 2.35
SGMS1-210ENST00000619438 C8orf37Q96NL8 207 aa29.7■■■□□ 2.35
SGMS1-210ENST00000619438 QRICH2Q9H0J4 1663 aa29.7■■■□□ 2.34
SGMS1-210ENST00000619438 ATP7BP35670 1465 aa29.69■■■□□ 2.34
SGMS1-210ENST00000619438 WASHC2AQ641Q2 1341 aa29.69■■■□□ 2.34
SGMS1-210ENST00000619438 PAK3O75914 559 aaPredicted RBP29.69■■■□□ 2.34
SGMS1-210ENST00000619438 ITSN1Q15811 1721 aa29.68■■■□□ 2.34
SGMS1-210ENST00000619438 SBNO1A3KN83 1393 aa29.67■■■□□ 2.34
SGMS1-210ENST00000619438 HAP1P54257 671 aaPredicted RBP29.67■■■□□ 2.34
SGMS1-210ENST00000619438 ZNF772Q68DY9 489 aaPredicted RBP29.67■■■□□ 2.34
SGMS1-210ENST00000619438 NGLY1Q96IV0 654 aa29.67■■■□□ 2.34
SGMS1-210ENST00000619438 AFF2P51816 1311 aa29.67■■■□□ 2.34
SGMS1-210ENST00000619438 ACEP12821 1306 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms