RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 PREX1Q8TCU6 1659 aa39.4■■■■□ 3.9
KHSRP-213ENST00000619396 SLFN5Q08AF3 891 aa39.39■■■■□ 3.9
KHSRP-213ENST00000619396 SLC12A5Q9H2X9 1139 aa39.39■■■■□ 3.9
KHSRP-213ENST00000619396 TRMT2AQ8IZ69 625 aaKnown RBP39.38■■■■□ 3.89
KHSRP-213ENST00000619396 NBR1Q14596 966 aa39.37■■■■□ 3.89
KHSRP-213ENST00000619396 KDM2BQ8NHM5 1336 aa39.36■■■■□ 3.89
KHSRP-213ENST00000619396 SLC52A1Q9NWF4 448 aa39.35■■■■□ 3.89
KHSRP-213ENST00000619396 ARHGEF28Q8N1W1 1705 aaKnown RBP39.33■■■■□ 3.89
KHSRP-213ENST00000619396 DEKP35659 375 aaKnown RBP39.32■■■■□ 3.89
KHSRP-213ENST00000619396 NPM2Q86SE8 214 aaKnown RBP39.32■■■■□ 3.89
KHSRP-213ENST00000619396 TMEM131LA2VDJ0 1609 aa39.31■■■■□ 3.88
KHSRP-213ENST00000619396 NSD3Q9BZ95 1437 aa39.3■■■■□ 3.88
KHSRP-213ENST00000619396 SAFB2Q14151 953 aaKnown RBP eCLIP39.3■■■■□ 3.88
KHSRP-213ENST00000619396 SKAP1Q86WV1 359 aa39.3■■■■□ 3.88
KHSRP-213ENST00000619396 CCDC146Q8IYE0 955 aa39.3■■■■□ 3.88
KHSRP-213ENST00000619396 STK26Q9P289 416 aa39.27■■■■□ 3.88
KHSRP-213ENST00000619396 APAF1O14727 1248 aa39.25■■■■□ 3.87
KHSRP-213ENST00000619396 GOLGA6L2Q8N9W4 650 aaPredicted RBP39.25■■■■□ 3.87
KHSRP-213ENST00000619396 SPINK5Q9NQ38 1064 aaPredicted RBP39.24■■■■□ 3.87
KHSRP-213ENST00000619396 TULP4Q9NRJ4 1543 aa39.24■■■■□ 3.87
KHSRP-213ENST00000619396 CENPQQ7L2Z9 268 aaPredicted RBP39.24■■■■□ 3.87
KHSRP-213ENST00000619396 TNNT2P45379 298 aaPredicted RBP39.21■■■■□ 3.87
KHSRP-213ENST00000619396 ZFYVE9O95405 1425 aa39.21■■■■□ 3.87
KHSRP-213ENST00000619396 NKTRP30414 1462 aaKnown RBP39.19■■■■□ 3.86
KHSRP-213ENST00000619396 CABP2Q9NPB3 220 aa39.19■■■■□ 3.86
KHSRP-213ENST00000619396 MLECQ14165 292 aa39.18■■■■□ 3.86
KHSRP-213ENST00000619396 EVC2Q86UK5 1308 aa39.17■■■■□ 3.86
KHSRP-213ENST00000619396 NGEFQ8N5V2 710 aa39.17■■■■□ 3.86
KHSRP-213ENST00000619396 CLTCQ00610 1675 aaKnown RBP39.16■■■■□ 3.86
KHSRP-213ENST00000619396 POLR3AO14802 1390 aaPredicted RBP39.15■■■■□ 3.86
KHSRP-213ENST00000619396 MORC1Q86VD1 984 aa39.15■■■■□ 3.86
KHSRP-213ENST00000619396 E9PSI1 815 aa39.14■■■■□ 3.86
KHSRP-213ENST00000619396 REREQ9P2R6 1566 aa39.1■■■■□ 3.85
KHSRP-213ENST00000619396 STAG3Q9UJ98 1225 aa39.1■■■■□ 3.85
KHSRP-213ENST00000619396 DMRT2Q9Y5R5 561 aa39.1■■■■□ 3.85
KHSRP-213ENST00000619396 AGLP35573 1532 aa39.09■■■■□ 3.85
KHSRP-213ENST00000619396 RTL5Q5HYW3 569 aaPredicted RBP39.06■■■■□ 3.84
KHSRP-213ENST00000619396 KIF13AQ9H1H9 1805 aa39.05■■■■□ 3.84
KHSRP-213ENST00000619396 BCAR3O75815 825 aa39.05■■■■□ 3.84
KHSRP-213ENST00000619396 PTPRMP28827 1452 aa39.05■■■■□ 3.84
KHSRP-213ENST00000619396 PRAM1Q96QH2 718 aa39.04■■■■□ 3.84
KHSRP-213ENST00000619396 MINK1Q8N4C8 1332 aaPredicted RBP39.03■■■■□ 3.84
KHSRP-213ENST00000619396 CGNL1Q0VF96 1302 aa39.02■■■■□ 3.84
KHSRP-213ENST00000619396 YTHDC2Q9H6S0 1430 aaKnown RBP39.02■■■■□ 3.84
KHSRP-213ENST00000619396 ANKRD36BQ8N2N9 1353 aa39.02■■■■□ 3.84
KHSRP-213ENST00000619396 USP32Q8NFA0 1604 aa39.02■■■■□ 3.84
KHSRP-213ENST00000619396 SRPK2P78362 688 aaKnown RBP39.01■■■■□ 3.84
KHSRP-213ENST00000619396 PUS7Q96PZ0 661 aaKnown RBP39.01■■■■□ 3.84
KHSRP-213ENST00000619396 SHPRHQ149N8 1683 aa39■■■■□ 3.83
KHSRP-213ENST00000619396 ALKQ9UM73 1620 aa39■■■■□ 3.83
KHSRP-213ENST00000619396 DDRGK1Q96HY6 314 aa39■■■■□ 3.83
KHSRP-213ENST00000619396 WWC1Q8IX03 1113 aa38.99■■■■□ 3.83
KHSRP-213ENST00000619396 FAM161AQ3B820 660 aa38.97■■■■□ 3.83
KHSRP-213ENST00000619396 POGKQ9P215 609 aa38.97■■■■□ 3.83
KHSRP-213ENST00000619396 PPP6R1Q9UPN7 881 aa38.97■■■■□ 3.83
KHSRP-213ENST00000619396 MTHFSP49914 203 aa38.95■■■■□ 3.83
KHSRP-213ENST00000619396 C8orf34Q49A92 452 aa38.95■■■■□ 3.83
KHSRP-213ENST00000619396 A2ML1A8K2U0 1454 aa38.95■■■■□ 3.83
KHSRP-213ENST00000619396 SPATA31D1Q6ZQQ2 1576 aa38.94■■■■□ 3.82
KHSRP-213ENST00000619396 A0A1W2PP64 1363 aa38.94■■■■□ 3.82
KHSRP-213ENST00000619396 LAS1LQ9Y4W2 734 aaKnown RBP38.93■■■■□ 3.82
KHSRP-213ENST00000619396 ARHGEF40Q8TER5 1519 aa38.92■■■■□ 3.82
KHSRP-213ENST00000619396 PDE3AQ14432 1141 aa38.91■■■■□ 3.82
KHSRP-213ENST00000619396 RUNDC1Q96C34 613 aa38.88■■■■□ 3.81
KHSRP-213ENST00000619396 USP35Q9P2H5 1018 aa38.88■■■■□ 3.81
KHSRP-213ENST00000619396 IQSEC2Q5JU85 1478 aa38.87■■■■□ 3.81
KHSRP-213ENST00000619396 PPM1GO15355 546 aaPredicted RBP38.87■■■■□ 3.81
KHSRP-213ENST00000619396 PHF23Q9BUL5 403 aaPredicted RBP38.87■■■■□ 3.81
KHSRP-213ENST00000619396 NINLQ9Y2I6 1382 aa38.87■■■■□ 3.81
KHSRP-213ENST00000619396 RIMS2Q9UQ26 1411 aa38.86■■■■□ 3.81
KHSRP-213ENST00000619396 RRP7AQ9Y3A4 280 aaKnown RBP38.84■■■■□ 3.81
KHSRP-213ENST00000619396 NEUROD2Q15784 382 aa38.83■■■■□ 3.81
KHSRP-213ENST00000619396 NEFMP07197 916 aa38.83■■■■□ 3.81
KHSRP-213ENST00000619396 WAPLQ7Z5K2 1190 aa38.83■■■■□ 3.81
KHSRP-213ENST00000619396 GGNBP2Q9H3C7 697 aa38.83■■■■□ 3.81
KHSRP-213ENST00000619396 IGHDP01880 384 aa38.82■■■■□ 3.81
KHSRP-213ENST00000619396 CDK19Q9BWU1 502 aa38.82■■■■□ 3.81
KHSRP-213ENST00000619396 RGS3P49796 1198 aa38.82■■■■□ 3.8
KHSRP-213ENST00000619396 ABCC11Q96J66 1382 aa38.81■■■■□ 3.8
KHSRP-213ENST00000619396 CD163L1Q9NR16 1453 aa38.81■■■■□ 3.8
KHSRP-213ENST00000619396 TCP11L2Q8N4U5 519 aa38.81■■■■□ 3.8
KHSRP-213ENST00000619396 NSD2O96028 1365 aa38.81■■■■□ 3.8
KHSRP-213ENST00000619396 ZMYM3Q14202 1370 aa38.79■■■■□ 3.8
KHSRP-213ENST00000619396 ATAD2Q6PL18 1390 aa38.79■■■■□ 3.8
KHSRP-213ENST00000619396 SETD1AO15047 1707 aaKnown RBP38.78■■■■□ 3.8
KHSRP-213ENST00000619396 WDR63Q8IWG1 891 aa38.77■■■■□ 3.8
KHSRP-213ENST00000619396 CFAP53Q96M91 514 aa38.77■■■■□ 3.8
KHSRP-213ENST00000619396 PANK1Q8TE04 598 aa38.75■■■■□ 3.79
KHSRP-213ENST00000619396 ESF1Q9H501 851 aaKnown RBP38.75■■■■□ 3.79
KHSRP-213ENST00000619396 CLUAP1Q96AJ1 413 aa38.75■■■■□ 3.79
KHSRP-213ENST00000619396 RARSP54136 660 aaKnown RBP38.74■■■■□ 3.79
KHSRP-213ENST00000619396 CCDC27Q2M243 656 aa38.74■■■■□ 3.79
KHSRP-213ENST00000619396 CABP1Q9NZU7 370 aa38.73■■■■□ 3.79
KHSRP-213ENST00000619396 FYB1O15117 783 aa38.73■■■■□ 3.79
KHSRP-213ENST00000619396 TERF2IPQ9NYB0 399 aa38.73■■■■□ 3.79
KHSRP-213ENST00000619396 COG6Q9Y2V7 657 aa38.73■■■■□ 3.79
KHSRP-213ENST00000619396 NCBP3Q53F19 620 aaKnown RBP38.7■■■■□ 3.79
KHSRP-213ENST00000619396 NRXN3Q9Y4C0 1643 aa38.7■■■■□ 3.79
KHSRP-213ENST00000619396 CANXP27824 592 aaKnown RBP38.69■■■■□ 3.78
KHSRP-213ENST00000619396 SLC4A3P48751 1232 aa38.68■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms