RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 ROCK1Q13464 1354 aa13.69□□□□□ -0.22
SYN3-213ENST00000619146 ATRNO75882 1429 aa13.68□□□□□ -0.22
SYN3-213ENST00000619146 ROBO2Q9HCK4 1378 aa13.68□□□□□ -0.22
SYN3-213ENST00000619146 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.67□□□□□ -0.22
SYN3-213ENST00000619146 PLEKHG5O94827 1062 aa13.67□□□□□ -0.22
SYN3-213ENST00000619146 SOS2Q07890 1332 aaPredicted RBP13.66□□□□□ -0.22
SYN3-213ENST00000619146 NUTM2FA1L443 756 aa13.66□□□□□ -0.22
SYN3-213ENST00000619146 GLI3P10071 1580 aa13.65□□□□□ -0.22
SYN3-213ENST00000619146 PTCH1Q13635 1447 aa13.64□□□□□ -0.23
SYN3-213ENST00000619146 PLCH1Q4KWH8 1693 aa13.64□□□□□ -0.23
SYN3-213ENST00000619146 IFT172Q9UG01 1749 aa13.64□□□□□ -0.23
SYN3-213ENST00000619146 HFM1A2PYH4 1435 aa13.64□□□□□ -0.23
SYN3-213ENST00000619146 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
SYN3-213ENST00000619146 BCL9LQ86UU0 1499 aa13.63□□□□□ -0.23
SYN3-213ENST00000619146 HRCP23327 699 aa13.63□□□□□ -0.23
SYN3-213ENST00000619146 ESCO1Q5FWF5 840 aa13.63□□□□□ -0.23
SYN3-213ENST00000619146 FNBP4Q8N3X1 1017 aaPredicted RBP13.63□□□□□ -0.23
SYN3-213ENST00000619146 MYOM2P54296 1465 aa13.62□□□□□ -0.23
SYN3-213ENST00000619146 ABCA3Q99758 1704 aa13.61□□□□□ -0.23
SYN3-213ENST00000619146 FMN2Q9NZ56 1722 aa13.61□□□□□ -0.23
SYN3-213ENST00000619146 PXDNQ92626 1479 aa13.61□□□□□ -0.23
SYN3-213ENST00000619146 FOXO3O43524 673 aa13.61□□□□□ -0.23
SYN3-213ENST00000619146 DEFB132Q7Z7B7 95 aa13.61□□□□□ -0.23
SYN3-213ENST00000619146 CDC42BPGQ6DT37 1551 aa13.6□□□□□ -0.23
SYN3-213ENST00000619146 NAIPQ13075 1403 aa13.59□□□□□ -0.23
SYN3-213ENST00000619146 GJD4Q96KN9 370 aaPredicted RBP13.59□□□□□ -0.23
SYN3-213ENST00000619146 STK26Q9P289 416 aa13.59□□□□□ -0.23
SYN3-213ENST00000619146 USP32Q8NFA0 1604 aa13.59□□□□□ -0.23
SYN3-213ENST00000619146 FOXD1Q16676 465 aa13.58□□□□□ -0.24
SYN3-213ENST00000619146 RALGAPBQ86X10 1494 aa13.58□□□□□ -0.24
SYN3-213ENST00000619146 NPHP3Q7Z494 1330 aa13.58□□□□□ -0.24
SYN3-213ENST00000619146 KNDC1Q76NI1 1749 aa13.57□□□□□ -0.24
SYN3-213ENST00000619146 RAB3GAP2Q9H2M9 1393 aa13.57□□□□□ -0.24
SYN3-213ENST00000619146 KIF1AQ12756 1690 aa13.56□□□□□ -0.24
SYN3-213ENST00000619146 PSDA5PKW4 1024 aaPredicted RBP13.56□□□□□ -0.24
SYN3-213ENST00000619146 VGFO15240 615 aaPredicted RBP13.56□□□□□ -0.24
SYN3-213ENST00000619146 WAPLQ7Z5K2 1190 aa13.56□□□□□ -0.24
SYN3-213ENST00000619146 LRP5O75197 1615 aa13.56□□□□□ -0.24
SYN3-213ENST00000619146 NWD2Q9ULI1 1742 aa13.56□□□□□ -0.24
SYN3-213ENST00000619146 CCDC125Q86Z20 511 aa13.55□□□□□ -0.24
SYN3-213ENST00000619146 CCDC9Q9Y3X0 531 aaKnown RBP13.55□□□□□ -0.24
SYN3-213ENST00000619146 BLMP54132 1417 aaPredicted RBP13.55□□□□□ -0.24
SYN3-213ENST00000619146 CABLES1Q8TDN4 633 aa13.54□□□□□ -0.24
SYN3-213ENST00000619146 PLEKHH1Q9ULM0 1364 aa13.54□□□□□ -0.24
SYN3-213ENST00000619146 HAP1P54257 671 aaPredicted RBP13.53□□□□□ -0.24
SYN3-213ENST00000619146 UNC5CLQ8IV45 518 aa13.53□□□□□ -0.24
SYN3-213ENST00000619146 SLIT2O94813 1529 aa13.53□□□□□ -0.24
SYN3-213ENST00000619146 NRAPQ86VF7 1730 aa13.53□□□□□ -0.24
SYN3-213ENST00000619146 A0A0G2JS52 829 aa13.52□□□□□ -0.25
SYN3-213ENST00000619146 MYT1Q01538 1121 aa13.52□□□□□ -0.25
SYN3-213ENST00000619146 SF3B2Q13435 895 aaKnown RBP13.52□□□□□ -0.25
SYN3-213ENST00000619146 TMEM132EQ6IEE7 984 aa13.52□□□□□ -0.25
SYN3-213ENST00000619146 SEPT12Q8IYM1 358 aa13.52□□□□□ -0.25
SYN3-213ENST00000619146 RGPD1P0DJD0 1748 aa13.52□□□□□ -0.25
SYN3-213ENST00000619146 ADGRF5Q8IZF2 1346 aa13.51□□□□□ -0.25
SYN3-213ENST00000619146 RGL3Q3MIN7 710 aa13.51□□□□□ -0.25
SYN3-213ENST00000619146 LMOD2Q6P5Q4 547 aa13.51□□□□□ -0.25
SYN3-213ENST00000619146 PRAG1Q86YV5 1406 aa13.49□□□□□ -0.25
SYN3-213ENST00000619146 SPATA31A3Q5VYP0 1347 aa13.49□□□□□ -0.25
SYN3-213ENST00000619146 KRT28Q7Z3Y7 464 aa13.49□□□□□ -0.25
SYN3-213ENST00000619146 TNS1Q9HBL0 1735 aaKnown RBP13.49□□□□□ -0.25
SYN3-213ENST00000619146 LRPPRCP42704 1394 aaKnown RBP13.48□□□□□ -0.25
SYN3-213ENST00000619146 FAM182BQ5T319 152 aa13.48□□□□□ -0.25
SYN3-213ENST00000619146 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
SYN3-213ENST00000619146 CCER1Q8TC90 406 aaPredicted RBP13.47□□□□□ -0.25
SYN3-213ENST00000619146 RPGRIP1LQ68CZ1 1315 aa13.46□□□□□ -0.25
SYN3-213ENST00000619146 SAFB2Q14151 953 aaKnown RBP eCLIP13.46□□□□□ -0.25
SYN3-213ENST00000619146 KRT27Q7Z3Y8 459 aa13.46□□□□□ -0.25
SYN3-213ENST00000619146 CCDC144AA2RUR9 1427 aa13.46□□□□□ -0.26
SYN3-213ENST00000619146 TNS3Q68CZ2 1445 aa13.46□□□□□ -0.26
SYN3-213ENST00000619146 TRPM3Q9HCF6 1732 aaPredicted RBP13.45□□□□□ -0.26
SYN3-213ENST00000619146 FAM98CQ17RN3 349 aaKnown RBP13.44□□□□□ -0.26
SYN3-213ENST00000619146 COL14A1Q05707 1796 aaKnown RBP13.43□□□□□ -0.26
SYN3-213ENST00000619146 EN1Q05925 392 aaPredicted RBP13.43□□□□□ -0.26
SYN3-213ENST00000619146 VPS72Q15906 364 aa13.43□□□□□ -0.26
SYN3-213ENST00000619146 PMFBP1Q8TBY8 1022 aa13.43□□□□□ -0.26
SYN3-213ENST00000619146 PHF8Q9UPP1 1060 aa13.43□□□□□ -0.26
SYN3-213ENST00000619146 CRYBG1Q9Y4K1 1723 aa13.43□□□□□ -0.26
SYN3-213ENST00000619146 ALS2Q96Q42 1657 aa13.43□□□□□ -0.26
SYN3-213ENST00000619146 CLSPNQ9HAW4 1339 aa13.42□□□□□ -0.26
SYN3-213ENST00000619146 TECPR2O15040 1411 aa13.42□□□□□ -0.26
SYN3-213ENST00000619146 YTHDC2Q9H6S0 1430 aaKnown RBP13.42□□□□□ -0.26
SYN3-213ENST00000619146 BAG6P46379 1132 aa13.42□□□□□ -0.26
SYN3-213ENST00000619146 DHX57Q6P158 1386 aaKnown RBP13.42□□□□□ -0.26
SYN3-213ENST00000619146 FAM83GA6ND36 823 aa13.41□□□□□ -0.26
SYN3-213ENST00000619146 R3HDM1Q15032 1099 aaKnown RBP13.41□□□□□ -0.26
SYN3-213ENST00000619146 MPHOSPH9Q99550 1183 aa13.41□□□□□ -0.26
SYN3-213ENST00000619146 PSME1Q06323 249 aa13.4□□□□□ -0.26
SYN3-213ENST00000619146 NRXN1Q9ULB1 1477 aa13.4□□□□□ -0.26
SYN3-213ENST00000619146 BTG4Q9NY30 223 aa13.39□□□□□ -0.27
SYN3-213ENST00000619146 ABCC11Q96J66 1382 aa13.39□□□□□ -0.27
SYN3-213ENST00000619146 PIK3C2GO75747 1445 aa13.39□□□□□ -0.27
SYN3-213ENST00000619146 SPATA31E1Q6ZUB1 1445 aa13.39□□□□□ -0.27
SYN3-213ENST00000619146 THSD7AQ9UPZ6 1657 aa13.38□□□□□ -0.27
SYN3-213ENST00000619146 NUP188Q5SRE5 1749 aa13.38□□□□□ -0.27
SYN3-213ENST00000619146 ADGRB2O60241 1585 aa13.37□□□□□ -0.27
SYN3-213ENST00000619146 ONECUT3O60422 494 aaPredicted RBP13.37□□□□□ -0.27
SYN3-213ENST00000619146 RREB1Q92766 1687 aa13.37□□□□□ -0.27
SYN3-213ENST00000619146 PHRF1Q9P1Y6 1649 aaKnown RBP13.36□□□□□ -0.27
SYN3-213ENST00000619146 EZH2Q15910 746 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms