RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 STAC3Q96MF2 364 aa19.37■□□□□ 0.69
PDCD6-213ENST00000618970 KDM2AQ9Y2K7 1162 aa19.37■□□□□ 0.69
PDCD6-213ENST00000618970 NUTM2BA6NNL0 878 aaPredicted RBP19.36■□□□□ 0.69
PDCD6-213ENST00000618970 NUTM2EB1AL46 878 aaPredicted RBP19.36■□□□□ 0.69
PDCD6-213ENST00000618970 NUTM2AQ8IVF1 878 aaPredicted RBP19.36■□□□□ 0.69
PDCD6-213ENST00000618970 C1orf167Q5SNV9 1468 aa19.35■□□□□ 0.69
PDCD6-213ENST00000618970 PRAG1Q86YV5 1406 aa19.34■□□□□ 0.69
PDCD6-213ENST00000618970 ZNF772Q68DY9 489 aaPredicted RBP19.34■□□□□ 0.69
PDCD6-213ENST00000618970 TONSLQ96HA7 1378 aa19.33■□□□□ 0.69
PDCD6-213ENST00000618970 LAMC1P11047 1609 aa19.33■□□□□ 0.69
PDCD6-213ENST00000618970 PNPLA6Q8IY17 1366 aa19.32■□□□□ 0.68
PDCD6-213ENST00000618970 C14orf93Q9H972 538 aaKnown RBP19.32■□□□□ 0.68
PDCD6-213ENST00000618970 KIAA1210Q9ULL0 1709 aa19.31■□□□□ 0.68
PDCD6-213ENST00000618970 NBPF8Q3BBV2 869 aa19.31■□□□□ 0.68
PDCD6-213ENST00000618970 TIMELESSQ9UNS1 1208 aa19.31■□□□□ 0.68
PDCD6-213ENST00000618970 CFAP70Q5T0N1 1121 aa19.3■□□□□ 0.68
PDCD6-213ENST00000618970 LRRC59Q96AG4 307 aaKnown RBP19.3■□□□□ 0.68
PDCD6-213ENST00000618970 AFF2P51816 1311 aa19.29■□□□□ 0.68
PDCD6-213ENST00000618970 TRPM1Q7Z4N2 1603 aa19.28■□□□□ 0.68
PDCD6-213ENST00000618970 ORAI2Q96SN7 254 aa19.27■□□□□ 0.68
PDCD6-213ENST00000618970 ADGRB1O14514 1584 aa19.27■□□□□ 0.67
PDCD6-213ENST00000618970 CDC42BPGQ6DT37 1551 aa19.26■□□□□ 0.67
PDCD6-213ENST00000618970 CDK12Q9NYV4 1490 aaPredicted RBP19.25■□□□□ 0.67
PDCD6-213ENST00000618970 RXRBP28702 533 aa19.25■□□□□ 0.67
PDCD6-213ENST00000618970 C8orf37Q96NL8 207 aa19.25■□□□□ 0.67
PDCD6-213ENST00000618970 MSH5O43196 834 aa19.24■□□□□ 0.67
PDCD6-213ENST00000618970 NBPF1Q3BBV0 1214 aa19.24■□□□□ 0.67
PDCD6-213ENST00000618970 TMEM132EQ6IEE7 984 aa19.24■□□□□ 0.67
PDCD6-213ENST00000618970 SOS2Q07890 1332 aaPredicted RBP19.24■□□□□ 0.67
PDCD6-213ENST00000618970 UPF1Q92900 1129 aaKnown RBP eCLIP19.22■□□□□ 0.67
PDCD6-213ENST00000618970 KNDC1Q76NI1 1749 aa19.22■□□□□ 0.67
PDCD6-213ENST00000618970 TECPR2O15040 1411 aa19.21■□□□□ 0.67
PDCD6-213ENST00000618970 COL22A1Q8NFW1 1626 aaPredicted RBP19.21■□□□□ 0.67
PDCD6-213ENST00000618970 RGS12O14924 1447 aa19.2■□□□□ 0.66
PDCD6-213ENST00000618970 ADAMTS2O95450 1211 aa19.2■□□□□ 0.66
PDCD6-213ENST00000618970 LRPPRCP42704 1394 aaKnown RBP19.19■□□□□ 0.66
PDCD6-213ENST00000618970 YTHDC2Q9H6S0 1430 aaKnown RBP19.19■□□□□ 0.66
PDCD6-213ENST00000618970 PXDNQ92626 1479 aa19.18■□□□□ 0.66
PDCD6-213ENST00000618970 STK26Q9P289 416 aa19.18■□□□□ 0.66
PDCD6-213ENST00000618970 ABCC11Q96J66 1382 aa19.18■□□□□ 0.66
PDCD6-213ENST00000618970 WAPLQ7Z5K2 1190 aa19.17■□□□□ 0.66
PDCD6-213ENST00000618970 QTRT2Q9H974 415 aaKnown RBP19.17■□□□□ 0.66
PDCD6-213ENST00000618970 PLEKHH1Q9ULM0 1364 aa19.17■□□□□ 0.66
PDCD6-213ENST00000618970 RALGAPBQ86X10 1494 aa19.16■□□□□ 0.66
PDCD6-213ENST00000618970 GPRASP1Q5JY77 1395 aa19.16■□□□□ 0.66
PDCD6-213ENST00000618970 FMN2Q9NZ56 1722 aa19.15■□□□□ 0.66
PDCD6-213ENST00000618970 ESCO1Q5FWF5 840 aa19.15■□□□□ 0.66
PDCD6-213ENST00000618970 NGLY1Q96IV0 654 aa19.15■□□□□ 0.66
PDCD6-213ENST00000618970 ARHGEF28Q8N1W1 1705 aaKnown RBP19.14■□□□□ 0.66
PDCD6-213ENST00000618970 RBM6P78332 1123 aaKnown RBP19.14■□□□□ 0.65
PDCD6-213ENST00000618970 DLC1Q96QB1 1528 aa19.14■□□□□ 0.65
PDCD6-213ENST00000618970 NUTM2FA1L443 756 aa19.13■□□□□ 0.65
PDCD6-213ENST00000618970 XPCQ01831 940 aaPredicted RBP19.13■□□□□ 0.65
PDCD6-213ENST00000618970 SIRT1Q96EB6 747 aa19.13■□□□□ 0.65
PDCD6-213ENST00000618970 NPHP3Q7Z494 1330 aa19.13■□□□□ 0.65
PDCD6-213ENST00000618970 MARF1Q9Y4F3 1742 aaKnown RBP19.13■□□□□ 0.65
PDCD6-213ENST00000618970 FOXO3O43524 673 aa19.11■□□□□ 0.65
PDCD6-213ENST00000618970 ROCK2O75116 1388 aaKnown RBP19.1■□□□□ 0.65
PDCD6-213ENST00000618970 USP21Q9UK80 565 aa19.1■□□□□ 0.65
PDCD6-213ENST00000618970 TRAK1Q9UPV9 953 aa19.1■□□□□ 0.65
PDCD6-213ENST00000618970 KIF1AQ12756 1690 aa19.09■□□□□ 0.65
PDCD6-213ENST00000618970 FNBP4Q8N3X1 1017 aaPredicted RBP19.09■□□□□ 0.65
PDCD6-213ENST00000618970 EP400Q96L91 3159 aa19.09■□□□□ 0.65
PDCD6-213ENST00000618970 RGPD8O14715 1765 aaPredicted RBP19.09■□□□□ 0.65
PDCD6-213ENST00000618970 ATRNO75882 1429 aa19.08■□□□□ 0.65
PDCD6-213ENST00000618970 TRPC5Q9UL62 973 aaPredicted RBP19.06■□□□□ 0.64
PDCD6-213ENST00000618970 BCL9LQ86UU0 1499 aa19.05■□□□□ 0.64
PDCD6-213ENST00000618970 CARD11Q9BXL7 1154 aa19.05■□□□□ 0.64
PDCD6-213ENST00000618970 PRAM1Q96QH2 718 aa19.04■□□□□ 0.64
PDCD6-213ENST00000618970 PIAS4Q8N2W9 510 aaPredicted RBP19.03■□□□□ 0.64
PDCD6-213ENST00000618970 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.03■□□□□ 0.64
PDCD6-213ENST00000618970 QRICH2Q9H0J4 1663 aa19.01■□□□□ 0.63
PDCD6-213ENST00000618970 SPATA31A3Q5VYP0 1347 aa19.01■□□□□ 0.63
PDCD6-213ENST00000618970 USP32Q8NFA0 1604 aa19.01■□□□□ 0.63
PDCD6-213ENST00000618970 ATAD2Q6PL18 1390 aa19.01■□□□□ 0.63
PDCD6-213ENST00000618970 SRCAPQ6ZRS2 3230 aa19■□□□□ 0.63
PDCD6-213ENST00000618970 SAFB2Q14151 953 aaKnown RBP eCLIP19■□□□□ 0.633e-8■■□□□ 13.6
PDCD6-213ENST00000618970 POGKQ9P215 609 aa18.99■□□□□ 0.63
PDCD6-213ENST00000618970 ABCA3Q99758 1704 aa18.99■□□□□ 0.63
PDCD6-213ENST00000618970 ADGRB2O60241 1585 aa18.98■□□□□ 0.63
PDCD6-213ENST00000618970 KRT28Q7Z3Y7 464 aa18.98■□□□□ 0.63
PDCD6-213ENST00000618970 SLIT2O94813 1529 aa18.98■□□□□ 0.63
PDCD6-213ENST00000618970 TNS3Q68CZ2 1445 aa18.98■□□□□ 0.63
PDCD6-213ENST00000618970 PHF8Q9UPP1 1060 aa18.97■□□□□ 0.63
PDCD6-213ENST00000618970 GLI3P10071 1580 aa18.97■□□□□ 0.63
PDCD6-213ENST00000618970 CENPJQ9HC77 1338 aaPredicted RBP18.97■□□□□ 0.63
PDCD6-213ENST00000618970 USP47Q96K76 1375 aa18.95■□□□□ 0.62
PDCD6-213ENST00000618970 MINK1Q8N4C8 1332 aaPredicted RBP18.95■□□□□ 0.62
PDCD6-213ENST00000618970 PLCH1Q4KWH8 1693 aa18.95■□□□□ 0.62
PDCD6-213ENST00000618970 ST20-MTHFSA0A0A6YYL1 179 aa18.94■□□□□ 0.62
PDCD6-213ENST00000618970 GJD4Q96KN9 370 aaPredicted RBP18.94■□□□□ 0.62
PDCD6-213ENST00000618970 TESK2Q96S53 571 aa18.94■□□□□ 0.62
PDCD6-213ENST00000618970 ZEB1P37275 1124 aaPredicted RBP18.93■□□□□ 0.62
PDCD6-213ENST00000618970 CABLES1Q8TDN4 633 aa18.93■□□□□ 0.62
PDCD6-213ENST00000618970 HIRIP3Q9BW71 556 aaPredicted RBP18.93■□□□□ 0.62
PDCD6-213ENST00000618970 SBNO1A3KN83 1393 aa18.93■□□□□ 0.62
PDCD6-213ENST00000618970 EIF3AQ14152 1382 aaKnown RBP18.93■□□□□ 0.62
PDCD6-213ENST00000618970 ANKARQ7Z5J8 1434 aa18.92■□□□□ 0.62
PDCD6-213ENST00000618970 TRPM3Q9HCF6 1732 aaPredicted RBP18.92■□□□□ 0.62
PDCD6-213ENST00000618970 TULP4Q9NRJ4 1543 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms