RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 DHX16O60231 1041 aaKnown RBP13.8□□□□□ -0.2
PCDHA4-204ENST00000618834 AMPHP49418 695 aa13.8□□□□□ -0.2
PCDHA4-204ENST00000618834 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCDHA4-204ENST00000618834 ANKRD18AQ8IVF6 992 aa13.8□□□□□ -0.2
PCDHA4-204ENST00000618834 IQCEQ6IPM2 695 aa13.8□□□□□ -0.2
PCDHA4-204ENST00000618834 RNF214Q8ND24 703 aa13.79□□□□□ -0.2
PCDHA4-204ENST00000618834 MAGEC2Q9UBF1 373 aaPredicted RBP13.79□□□□□ -0.2
PCDHA4-204ENST00000618834 COG6Q9Y2V7 657 aa13.79□□□□□ -0.2
PCDHA4-204ENST00000618834 ERLIN1O75477 346 aa13.79□□□□□ -0.2
PCDHA4-204ENST00000618834 SDF4Q9BRK5 362 aa13.79□□□□□ -0.2
PCDHA4-204ENST00000618834 EZRP15311 586 aaKnown RBP13.78□□□□□ -0.2
PCDHA4-204ENST00000618834 TRAK2O60296 914 aa13.78□□□□□ -0.2
PCDHA4-204ENST00000618834 UACAQ9BZF9 1416 aa13.78□□□□□ -0.2
PCDHA4-204ENST00000618834 ERC2O15083 957 aa13.78□□□□□ -0.2
PCDHA4-204ENST00000618834 RABEP1Q15276 862 aa13.78□□□□□ -0.2
PCDHA4-204ENST00000618834 VPS37DQ86XT2 251 aa13.78□□□□□ -0.2
PCDHA4-204ENST00000618834 GIMAP7Q8NHV1 300 aa13.77□□□□□ -0.2
PCDHA4-204ENST00000618834 CLASRPQ8N2M8 674 aaKnown RBP13.77□□□□□ -0.2
PCDHA4-204ENST00000618834 NEFHP12036 1026 aa13.77□□□□□ -0.21
PCDHA4-204ENST00000618834 TXLNBQ8N3L3 684 aa13.77□□□□□ -0.21
PCDHA4-204ENST00000618834 CENPHQ9H3R5 247 aa13.77□□□□□ -0.21
PCDHA4-204ENST00000618834 ERICH4A6NGS2 130 aa13.77□□□□□ -0.21
PCDHA4-204ENST00000618834 FILIP1LQ4L180 1135 aa13.77□□□□□ -0.21
PCDHA4-204ENST00000618834 SPC24Q8NBT2 197 aa13.77□□□□□ -0.21
PCDHA4-204ENST00000618834 NACADO15069 1562 aa13.76□□□□□ -0.21
PCDHA4-204ENST00000618834 CCDC112Q8NEF3 446 aa13.76□□□□□ -0.21
PCDHA4-204ENST00000618834 MLECQ14165 292 aa13.76□□□□□ -0.21
PCDHA4-204ENST00000618834 DZIP1LQ8IYY4 767 aaKnown RBP13.76□□□□□ -0.21
PCDHA4-204ENST00000618834 CUX2O14529 1486 aa13.76□□□□□ -0.21
PCDHA4-204ENST00000618834 C1orf141Q5JVX7 400 aa13.76□□□□□ -0.21
PCDHA4-204ENST00000618834 CCDC18Q5T9S5 1454 aa13.76□□□□□ -0.21
PCDHA4-204ENST00000618834 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
PCDHA4-204ENST00000618834 PRKCSHP14314 528 aaPredicted RBP13.75□□□□□ -0.21
PCDHA4-204ENST00000618834 PSMA5P28066 241 aa13.75□□□□□ -0.21
PCDHA4-204ENST00000618834 GBP2P32456 591 aaPredicted RBP13.75□□□□□ -0.21
PCDHA4-204ENST00000618834 ZNHIT6Q9NWK9 470 aaKnown RBP13.75□□□□□ -0.21
PCDHA4-204ENST00000618834 LUC7LQ9NQ29 371 aaKnown RBP13.75□□□□□ -0.21
PCDHA4-204ENST00000618834 XBP1P17861 261 aa13.75□□□□□ -0.21
PCDHA4-204ENST00000618834 AAMPQ13685 434 aa13.75□□□□□ -0.21
PCDHA4-204ENST00000618834 CDC45O75419 566 aa13.75□□□□□ -0.21
PCDHA4-204ENST00000618834 RALYLQ86SE5 291 aaKnown RBP13.75□□□□□ -0.21
PCDHA4-204ENST00000618834 LRRCC1Q9C099 1032 aa13.75□□□□□ -0.21
PCDHA4-204ENST00000618834 USP47Q96K76 1375 aa13.75□□□□□ -0.21
PCDHA4-204ENST00000618834 PDCP20941 246 aa13.74□□□□□ -0.21
PCDHA4-204ENST00000618834 LTV1Q96GA3 475 aaPredicted RBP13.74□□□□□ -0.21
PCDHA4-204ENST00000618834 PIP4K2AP48426 406 aaPredicted RBP13.74□□□□□ -0.21
PCDHA4-204ENST00000618834 G3BP1Q13283 466 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCDHA4-204ENST00000618834 SLC26A8Q96RN1 970 aa13.73□□□□□ -0.21
PCDHA4-204ENST00000618834 FAM193AP78312 1265 aa13.73□□□□□ -0.21
PCDHA4-204ENST00000618834 CARMIL1Q5VZK9 1371 aa13.73□□□□□ -0.21
PCDHA4-204ENST00000618834 RBM33Q96EV2 1170 aaKnown RBP13.73□□□□□ -0.21
PCDHA4-204ENST00000618834 CCDC192P0DO97 292 aa13.73□□□□□ -0.21
PCDHA4-204ENST00000618834 ZNF396Q96N95 335 aaPredicted RBP13.73□□□□□ -0.21
PCDHA4-204ENST00000618834 CCDC27Q2M243 656 aa13.72□□□□□ -0.21
PCDHA4-204ENST00000618834 CCDC144AA2RUR9 1427 aa13.72□□□□□ -0.21
PCDHA4-204ENST00000618834 SYCP1Q15431 976 aa13.72□□□□□ -0.21
PCDHA4-204ENST00000618834 ANKRD62A6NC57 917 aa13.72□□□□□ -0.21
PCDHA4-204ENST00000618834 CCDC181Q5TID7 509 aa13.72□□□□□ -0.21
PCDHA4-204ENST00000618834 TXLNAP40222 546 aa13.72□□□□□ -0.21
PCDHA4-204ENST00000618834 PPFIBP1Q86W92 1011 aa13.72□□□□□ -0.21
PCDHA4-204ENST00000618834 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
PCDHA4-204ENST00000618834 PANK3Q9H999 370 aa13.72□□□□□ -0.21
PCDHA4-204ENST00000618834 DDX11Q96FC9 970 aa13.71□□□□□ -0.21
PCDHA4-204ENST00000618834 IL27Q8NEV9 243 aa13.71□□□□□ -0.21
PCDHA4-204ENST00000618834 BRPF1P55201 1214 aaPredicted RBP13.7□□□□□ -0.22
PCDHA4-204ENST00000618834 CDK5RAP3Q96JB5 506 aa13.7□□□□□ -0.22
PCDHA4-204ENST00000618834 TAX1BP1Q86VP1 789 aa13.7□□□□□ -0.22
PCDHA4-204ENST00000618834 API5Q9BZZ5 524 aaKnown RBP13.7□□□□□ -0.22
PCDHA4-204ENST00000618834 DHX37Q8IY37 1157 aaKnown RBP13.7□□□□□ -0.22
PCDHA4-204ENST00000618834 TTC5Q8N0Z6 440 aa13.69□□□□□ -0.22
PCDHA4-204ENST00000618834 CNTROBQ8N137 903 aa13.69□□□□□ -0.22
PCDHA4-204ENST00000618834 CCAR1Q8IX12 1150 aaKnown RBP13.69□□□□□ -0.22
PCDHA4-204ENST00000618834 SERPINC1P01008 464 aa13.69□□□□□ -0.22
PCDHA4-204ENST00000618834 STIM1Q13586 685 aa13.68□□□□□ -0.22
PCDHA4-204ENST00000618834 HSP90AB4PQ58FF6 505 aa13.68□□□□□ -0.22
PCDHA4-204ENST00000618834 SOGA1O94964 1423 aa13.68□□□□□ -0.22
PCDHA4-204ENST00000618834 MCM2P49736 904 aa13.68□□□□□ -0.22
PCDHA4-204ENST00000618834 GGT6Q6P531 493 aa13.68□□□□□ -0.22
PCDHA4-204ENST00000618834 TNMDQ9H2S6 317 aa13.68□□□□□ -0.22
PCDHA4-204ENST00000618834 MEX3CQ5U5Q3 659 aaKnown RBP13.68□□□□□ -0.22
PCDHA4-204ENST00000618834 COG3Q96JB2 828 aa13.68□□□□□ -0.22
PCDHA4-204ENST00000618834 DDX58O95786 925 aaKnown RBP13.68□□□□□ -0.22
PCDHA4-204ENST00000618834 NGEFQ8N5V2 710 aa13.68□□□□□ -0.22
PCDHA4-204ENST00000618834 L3MBTL2Q969R5 705 aa13.68□□□□□ -0.22
PCDHA4-204ENST00000618834 FMNL2Q96PY5 1086 aa13.68□□□□□ -0.22
PCDHA4-204ENST00000618834 CCDC102AQ96A19 550 aa13.68□□□□□ -0.22
PCDHA4-204ENST00000618834 CBFA2T2O43439 604 aa13.67□□□□□ -0.22
PCDHA4-204ENST00000618834 PRPF40AO75400 957 aaKnown RBP13.67□□□□□ -0.22
PCDHA4-204ENST00000618834 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.67□□□□□ -0.22
PCDHA4-204ENST00000618834 CARMIL2Q6F5E8 1435 aa13.67□□□□□ -0.22
PCDHA4-204ENST00000618834 ELL2O00472 640 aaPredicted RBP13.67□□□□□ -0.22
PCDHA4-204ENST00000618834 SART3Q15020 963 aaKnown RBP13.67□□□□□ -0.22
PCDHA4-204ENST00000618834 GRPEL1Q9HAV7 217 aa13.67□□□□□ -0.22
PCDHA4-204ENST00000618834 LNPKQ9C0E8 428 aa13.67□□□□□ -0.22
PCDHA4-204ENST00000618834 FIBPO43427 364 aa13.66□□□□□ -0.22
PCDHA4-204ENST00000618834 JMYQ8N9B5 988 aa13.66□□□□□ -0.22
PCDHA4-204ENST00000618834 DACH1Q9UI36 760 aa13.66□□□□□ -0.22
PCDHA4-204ENST00000618834 EVC2Q86UK5 1308 aa13.66□□□□□ -0.22
PCDHA4-204ENST00000618834 CCDC91Q7Z6B0 441 aa13.66□□□□□ -0.22
PCDHA4-204ENST00000618834 PDCL2Q8N4E4 241 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms