RNA–Protein interactions for RNA: ENST00000618829.4

SYNRG-224, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 3,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-224ENST00000618829 LMO7Q8WWI1 1683 aa9.45□□□□□ -0.9
SYNRG-224ENST00000618829 RCAN3Q9UKA8 241 aa9.45□□□□□ -0.9
SYNRG-224ENST00000618829 SCAPERQ9BY12 1400 aa9.45□□□□□ -0.9
SYNRG-224ENST00000618829 EXOC6Q8TAG9 804 aa9.45□□□□□ -0.9
SYNRG-224ENST00000618829 TMF1P82094 1093 aa9.44□□□□□ -0.9
SYNRG-224ENST00000618829 RRP1P56182 461 aaKnown RBP9.44□□□□□ -0.9
SYNRG-224ENST00000618829 CDCA7LQ96GN5 454 aa9.44□□□□□ -0.9
SYNRG-224ENST00000618829 BCL11AQ9H165 835 aa9.44□□□□□ -0.9
SYNRG-224ENST00000618829 LRPPRCP42704 1394 aaKnown RBP9.44□□□□□ -0.9
SYNRG-224ENST00000618829 ANP32AP39687 249 aaKnown RBP9.43□□□□□ -0.9
SYNRG-224ENST00000618829 NBR1Q14596 966 aa9.43□□□□□ -0.9
SYNRG-224ENST00000618829 RNF123Q5XPI4 1314 aa9.43□□□□□ -0.9
SYNRG-224ENST00000618829 DISP3Q9P2K9 1392 aa9.43□□□□□ -0.9
SYNRG-224ENST00000618829 NPM2Q86SE8 214 aaKnown RBP9.43□□□□□ -0.9
SYNRG-224ENST00000618829 A2MP01023 1474 aa9.43□□□□□ -0.9
SYNRG-224ENST00000618829 FMN2Q9NZ56 1722 aa9.42□□□□□ -0.9
SYNRG-224ENST00000618829 NOP58Q9Y2X3 529 aaKnown RBP9.42□□□□□ -0.9
SYNRG-224ENST00000618829 PLIN1O60240 522 aa9.42□□□□□ -0.9
SYNRG-224ENST00000618829 EFCAB2Q5VUJ9 269 aa9.42□□□□□ -0.9
SYNRG-224ENST00000618829 PEAK1Q9H792 1746 aa9.42□□□□□ -0.9
SYNRG-224ENST00000618829 CD109Q6YHK3 1445 aa9.42□□□□□ -0.9
SYNRG-224ENST00000618829 PER1O15534 1290 aaPredicted RBP9.42□□□□□ -0.9
SYNRG-224ENST00000618829 CDC42BPGQ6DT37 1551 aa9.41□□□□□ -0.9
SYNRG-224ENST00000618829 TESK2Q96S53 571 aa9.41□□□□□ -0.9
SYNRG-224ENST00000618829 ITSN1Q15811 1721 aa9.41□□□□□ -0.9
SYNRG-224ENST00000618829 PARD3Q8TEW0 1356 aa9.41□□□□□ -0.9
SYNRG-224ENST00000618829 CICQ96RK0 1608 aaPredicted RBP9.4□□□□□ -0.9
SYNRG-224ENST00000618829 PTPRMP28827 1452 aa9.4□□□□□ -0.9
SYNRG-224ENST00000618829 PAK3O75914 559 aaPredicted RBP9.4□□□□□ -0.9
SYNRG-224ENST00000618829 KNSTRNQ9Y448 316 aa9.4□□□□□ -0.9
SYNRG-224ENST00000618829 LMTK3Q96Q04 1460 aa9.39□□□□□ -0.91
SYNRG-224ENST00000618829 AFAP1Q8N556 730 aa9.39□□□□□ -0.91
SYNRG-224ENST00000618829 PDE3BQ13370 1112 aa9.39□□□□□ -0.91
SYNRG-224ENST00000618829 ADGRL1O94910 1474 aa9.39□□□□□ -0.91
SYNRG-224ENST00000618829 SPAG9O60271 1321 aaKnown RBP9.39□□□□□ -0.91
SYNRG-224ENST00000618829 WDR43Q15061 677 aaKnown RBP eCLIP9.38□□□□□ -0.91
SYNRG-224ENST00000618829 ZBTB47Q9UFB7 747 aaPredicted RBP9.38□□□□□ -0.91
SYNRG-224ENST00000618829 MST1RQ04912 1400 aa9.38□□□□□ -0.91
SYNRG-224ENST00000618829 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.37□□□□□ -0.91
SYNRG-224ENST00000618829 ADAMTS8Q9UP79 889 aa9.37□□□□□ -0.91
SYNRG-224ENST00000618829 ALS2Q96Q42 1657 aa9.37□□□□□ -0.91
SYNRG-224ENST00000618829 IPO9Q96P70 1041 aaKnown RBP9.36□□□□□ -0.91
SYNRG-224ENST00000618829 SIPA1L3O60292 1781 aaPredicted RBP9.36□□□□□ -0.91
SYNRG-224ENST00000618829 WASHC2CQ9Y4E1 1318 aa9.35□□□□□ -0.91
SYNRG-224ENST00000618829 CRBNQ96SW2 442 aa9.35□□□□□ -0.91
SYNRG-224ENST00000618829 KIF3BO15066 747 aa9.35□□□□□ -0.91
SYNRG-224ENST00000618829 SKAP1Q86WV1 359 aa9.35□□□□□ -0.91
SYNRG-224ENST00000618829 PIK3C2GO75747 1445 aa9.34□□□□□ -0.91
SYNRG-224ENST00000618829 TECPR2O15040 1411 aa9.34□□□□□ -0.91
SYNRG-224ENST00000618829 LRRC37A3O60309 1634 aa9.34□□□□□ -0.91
SYNRG-224ENST00000618829 PPP2R1AP30153 589 aa9.34□□□□□ -0.91
SYNRG-224ENST00000618829 TCERG1O14776 1098 aaKnown RBP9.33□□□□□ -0.92
SYNRG-224ENST00000618829 CHGAP10645 457 aaKnown RBP9.33□□□□□ -0.92
SYNRG-224ENST00000618829 CDCA8Q53HL2 280 aa9.33□□□□□ -0.92
SYNRG-224ENST00000618829 CCDC146Q8IYE0 955 aa9.33□□□□□ -0.92
SYNRG-224ENST00000618829 SHANK3Q9BYB0 1731 aa9.33□□□□□ -0.92
SYNRG-224ENST00000618829 PDE4AP27815 886 aa9.33□□□□□ -0.92
SYNRG-224ENST00000618829 DEKP35659 375 aaKnown RBP9.33□□□□□ -0.92
SYNRG-224ENST00000618829 RTL5Q5HYW3 569 aaPredicted RBP9.32□□□□□ -0.92
SYNRG-224ENST00000618829 C20orf194Q5TEA3 1177 aa9.32□□□□□ -0.92
SYNRG-224ENST00000618829 KANK1Q14678 1352 aa9.31□□□□□ -0.92
SYNRG-224ENST00000618829 CFAP70Q5T0N1 1121 aa9.31□□□□□ -0.92
SYNRG-224ENST00000618829 ARXQ96QS3 562 aa9.31□□□□□ -0.92
SYNRG-224ENST00000618829 PIK3C2AO00443 1686 aa9.3□□□□□ -0.92
SYNRG-224ENST00000618829 BLMP54132 1417 aaPredicted RBP9.3□□□□□ -0.92
SYNRG-224ENST00000618829 COL22A1Q8NFW1 1626 aaPredicted RBP9.3□□□□□ -0.92
SYNRG-224ENST00000618829 NPATQ14207 1427 aa9.3□□□□□ -0.92
SYNRG-224ENST00000618829 ABCC6O95255 1503 aa9.3□□□□□ -0.92
SYNRG-224ENST00000618829 PLCH1Q4KWH8 1693 aa9.3□□□□□ -0.92
SYNRG-224ENST00000618829 GOLGA2Q08379 1002 aa9.3□□□□□ -0.92
SYNRG-224ENST00000618829 LAS1LQ9Y4W2 734 aaKnown RBP9.29□□□□□ -0.92
SYNRG-224ENST00000618829 NHSL1Q5SYE7 1610 aa9.29□□□□□ -0.92
SYNRG-224ENST00000618829 COL18A1P39060 1754 aa9.28□□□□□ -0.92
SYNRG-224ENST00000618829 SCAF11Q99590 1463 aaKnown RBP9.28□□□□□ -0.92
SYNRG-224ENST00000618829 PLEKHH1Q9ULM0 1364 aa9.28□□□□□ -0.92
SYNRG-224ENST00000618829 TNNT2P45379 298 aaPredicted RBP9.28□□□□□ -0.92
SYNRG-224ENST00000618829 BACH2Q9BYV9 841 aa9.28□□□□□ -0.92
SYNRG-224ENST00000618829 RGPD8O14715 1765 aaPredicted RBP9.28□□□□□ -0.92
SYNRG-224ENST00000618829 EIF3AQ14152 1382 aaKnown RBP9.28□□□□□ -0.92
SYNRG-224ENST00000618829 APAF1O14727 1248 aa9.28□□□□□ -0.92
SYNRG-224ENST00000618829 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.27□□□□□ -0.92
SYNRG-224ENST00000618829 NLRP1Q9C000 1473 aa9.27□□□□□ -0.92
SYNRG-224ENST00000618829 DUSP27Q5VZP5 1158 aa9.27□□□□□ -0.93
SYNRG-224ENST00000618829 ADGRF5Q8IZF2 1346 aa9.27□□□□□ -0.93
SYNRG-224ENST00000618829 TULP4Q9NRJ4 1543 aa9.27□□□□□ -0.93
SYNRG-224ENST00000618829 MS4A1P11836 297 aa9.26□□□□□ -0.93
SYNRG-224ENST00000618829 YEATS2Q9ULM3 1422 aa9.26□□□□□ -0.93
SYNRG-224ENST00000618829 NEUROD2Q15784 382 aa9.26□□□□□ -0.93
SYNRG-224ENST00000618829 PARP4Q9UKK3 1724 aaKnown RBP9.25□□□□□ -0.93
SYNRG-224ENST00000618829 RGS3P49796 1198 aa9.25□□□□□ -0.93
SYNRG-224ENST00000618829 MED1Q15648 1581 aaPredicted RBP9.25□□□□□ -0.93
SYNRG-224ENST00000618829 FOXD4L1Q9NU39 408 aa9.25□□□□□ -0.93
SYNRG-224ENST00000618829 TRAK1Q9UPV9 953 aa9.25□□□□□ -0.93
SYNRG-224ENST00000618829 PAPPAQ13219 1627 aa9.25□□□□□ -0.93
SYNRG-224ENST00000618829 GGT6Q6P531 493 aa9.25□□□□□ -0.93
SYNRG-224ENST00000618829 STAC3Q96MF2 364 aa9.25□□□□□ -0.93
SYNRG-224ENST00000618829 CANXP27824 592 aaKnown RBP9.24□□□□□ -0.93
SYNRG-224ENST00000618829 SBNO2Q9Y2G9 1366 aa9.24□□□□□ -0.93
SYNRG-224ENST00000618829 TUBGCP6Q96RT7 1819 aa9.24□□□□□ -0.93
SYNRG-224ENST00000618829 CFAP65Q6ZU64 1925 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms