RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 WAPLQ7Z5K2 1190 aa22.36■■□□□ 1.17
RPP40-207ENST00000618533 MST1RQ04912 1400 aa22.36■■□□□ 1.17
RPP40-207ENST00000618533 CCER1Q8TC90 406 aaPredicted RBP22.35■■□□□ 1.17
RPP40-207ENST00000618533 PLEKHH1Q9ULM0 1364 aa22.35■■□□□ 1.17
RPP40-207ENST00000618533 PRAM1Q96QH2 718 aa22.34■■□□□ 1.17
RPP40-207ENST00000618533 POGKQ9P215 609 aa22.34■■□□□ 1.17
RPP40-207ENST00000618533 TRAK1Q9UPV9 953 aa22.34■■□□□ 1.17
RPP40-207ENST00000618533 ADGRB2O60241 1585 aa22.33■■□□□ 1.17
RPP40-207ENST00000618533 NBPF1Q3BBV0 1214 aa22.32■■□□□ 1.16
RPP40-207ENST00000618533 FMN2Q9NZ56 1722 aa22.31■■□□□ 1.16
RPP40-207ENST00000618533 ROCK2O75116 1388 aaKnown RBP22.3■■□□□ 1.16
RPP40-207ENST00000618533 GPRASP1Q5JY77 1395 aa22.3■■□□□ 1.16
RPP40-207ENST00000618533 C1orf167Q5SNV9 1468 aa22.29■■□□□ 1.16
RPP40-207ENST00000618533 RALGAPBQ86X10 1494 aa22.29■■□□□ 1.16
RPP40-207ENST00000618533 HSPA1LP34931 641 aa22.28■■□□□ 1.16
RPP40-207ENST00000618533 NBPF8Q3BBV2 869 aa22.28■■□□□ 1.16
RPP40-207ENST00000618533 AHDC1Q5TGY3 1603 aaPredicted RBP22.28■■□□□ 1.16
RPP40-207ENST00000618533 EIF3AQ14152 1382 aaKnown RBP22.26■■□□□ 1.15
RPP40-207ENST00000618533 PHLPP1O60346 1717 aa22.26■■□□□ 1.15
RPP40-207ENST00000618533 NHSL1Q5SYE7 1610 aa22.25■■□□□ 1.15
RPP40-207ENST00000618533 BRINP3Q76B58 766 aa22.25■■□□□ 1.15
RPP40-207ENST00000618533 SAFB2Q14151 953 aaKnown RBP eCLIP22.24■■□□□ 1.15
RPP40-207ENST00000618533 ANKARQ7Z5J8 1434 aa22.23■■□□□ 1.15
RPP40-207ENST00000618533 CENPJQ9HC77 1338 aaPredicted RBP22.22■■□□□ 1.15
RPP40-207ENST00000618533 KIF1AQ12756 1690 aa22.21■■□□□ 1.15
RPP40-207ENST00000618533 QRICH2Q9H0J4 1663 aa22.21■■□□□ 1.15
RPP40-207ENST00000618533 COL16A1Q07092 1604 aaPredicted RBP22.2■■□□□ 1.15
RPP40-207ENST00000618533 MINK1Q8N4C8 1332 aaPredicted RBP22.2■■□□□ 1.14
RPP40-207ENST00000618533 CARD11Q9BXL7 1154 aa22.19■■□□□ 1.14
RPP40-207ENST00000618533 TULP4Q9NRJ4 1543 aa22.19■■□□□ 1.14
RPP40-207ENST00000618533 RGPD8O14715 1765 aaPredicted RBP22.18■■□□□ 1.14
RPP40-207ENST00000618533 WASLO00401 505 aaPredicted RBP22.18■■□□□ 1.14
RPP40-207ENST00000618533 ITSN1Q15811 1721 aa22.17■■□□□ 1.14
RPP40-207ENST00000618533 ESCO1Q5FWF5 840 aa22.16■■□□□ 1.14
RPP40-207ENST00000618533 ORAI2Q96SN7 254 aa22.16■■□□□ 1.14
RPP40-207ENST00000618533 USP32Q8NFA0 1604 aa22.16■■□□□ 1.14
RPP40-207ENST00000618533 HIRIP3Q9BW71 556 aaPredicted RBP22.15■■□□□ 1.14
RPP40-207ENST00000618533 SBNO2Q9Y2G9 1366 aa22.14■■□□□ 1.14
RPP40-207ENST00000618533 NPHP3Q7Z494 1330 aa22.13■■□□□ 1.13
RPP40-207ENST00000618533 JCADQ9P266 1359 aa22.12■■□□□ 1.13
RPP40-207ENST00000618533 NUTM2FA1L443 756 aa22.12■■□□□ 1.13
RPP40-207ENST00000618533 SHPRHQ149N8 1683 aa22.11■■□□□ 1.13
RPP40-207ENST00000618533 SOS2Q07890 1332 aaPredicted RBP22.1■■□□□ 1.13
RPP40-207ENST00000618533 ATP7BP35670 1465 aa22.1■■□□□ 1.13
RPP40-207ENST00000618533 PHF8Q9UPP1 1060 aa22.1■■□□□ 1.13
RPP40-207ENST00000618533 LRRC59Q96AG4 307 aaKnown RBP22.09■■□□□ 1.13
RPP40-207ENST00000618533 CDK19Q9BWU1 502 aa22.09■■□□□ 1.13
RPP40-207ENST00000618533 TOPAZ1Q8N9V7 1692 aa22.08■■□□□ 1.13
RPP40-207ENST00000618533 SLC24A1O60721 1099 aa22.08■■□□□ 1.13
RPP40-207ENST00000618533 EVC2Q86UK5 1308 aa22.07■■□□□ 1.12
RPP40-207ENST00000618533 PRR36Q9H6K5 1346 aa22.07■■□□□ 1.12
RPP40-207ENST00000618533 PXDNQ92626 1479 aa22.07■■□□□ 1.12
RPP40-207ENST00000618533 NUDT16Q96DE0 195 aaKnown RBP22.06■■□□□ 1.12
RPP40-207ENST00000618533 FOXO3O43524 673 aa22.05■■□□□ 1.12
RPP40-207ENST00000618533 SPATA31A6Q5VVP1 1343 aa22.05■■□□□ 1.12
RPP40-207ENST00000618533 SRPK2P78362 688 aaKnown RBP22.04■■□□□ 1.12
RPP40-207ENST00000618533 CCDC61Q9Y6R9 512 aa22.04■■□□□ 1.12
RPP40-207ENST00000618533 DDX17Q92841 729 aaKnown RBP22.03■■□□□ 1.12
RPP40-207ENST00000618533 MED1Q15648 1581 aaPredicted RBP22.03■■□□□ 1.12
RPP40-207ENST00000618533 USP47Q96K76 1375 aa22.02■■□□□ 1.12
RPP40-207ENST00000618533 PSME1Q06323 249 aa22.02■■□□□ 1.12
RPP40-207ENST00000618533 COL22A1Q8NFW1 1626 aaPredicted RBP22■■□□□ 1.11
RPP40-207ENST00000618533 SBNO1A3KN83 1393 aa21.99■■□□□ 1.11
RPP40-207ENST00000618533 PNPLA6Q8IY17 1366 aa21.99■■□□□ 1.11
RPP40-207ENST00000618533 PLEKHG3A1L390 1219 aa21.99■■□□□ 1.11
RPP40-207ENST00000618533 KRT28Q7Z3Y7 464 aa21.99■■□□□ 1.11
RPP40-207ENST00000618533 PMFBP1Q8TBY8 1022 aa21.99■■□□□ 1.11
RPP40-207ENST00000618533 ATAD2Q6PL18 1390 aa21.99■■□□□ 1.11
RPP40-207ENST00000618533 ST20-MTHFSA0A0A6YYL1 179 aa21.98■■□□□ 1.11
RPP40-207ENST00000618533 PUS7Q96PZ0 661 aaKnown RBP21.98■■□□□ 1.11
RPP40-207ENST00000618533 CABP2Q9NPB3 220 aa21.98■■□□□ 1.11
RPP40-207ENST00000618533 POLR3AO14802 1390 aaPredicted RBP21.98■■□□□ 1.11
RPP40-207ENST00000618533 NGDNQ8NEJ9 315 aaKnown RBP21.97■■□□□ 1.11
RPP40-207ENST00000618533 TRPM3Q9HCF6 1732 aaPredicted RBP21.97■■□□□ 1.11
RPP40-207ENST00000618533 PPIP5K1Q6PFW1 1433 aa21.97■■□□□ 1.11
RPP40-207ENST00000618533 TESK2Q96S53 571 aa21.96■■□□□ 1.11
RPP40-207ENST00000618533 SPATA31A3Q5VYP0 1347 aa21.96■■□□□ 1.11
RPP40-207ENST00000618533 TNS3Q68CZ2 1445 aa21.96■■□□□ 1.11
RPP40-207ENST00000618533 XPCQ01831 940 aaPredicted RBP21.94■■□□□ 1.1
RPP40-207ENST00000618533 ARHGEF10O15013 1369 aa21.94■■□□□ 1.1
RPP40-207ENST00000618533 BRD4O60885 1362 aaPredicted RBP21.94■■□□□ 1.1
RPP40-207ENST00000618533 ALS2Q96Q42 1657 aa21.92■■□□□ 1.1
RPP40-207ENST00000618533 ACEP12821 1306 aa21.92■■□□□ 1.1
RPP40-207ENST00000618533 TMF1P82094 1093 aa21.9■■□□□ 1.1
RPP40-207ENST00000618533 LRP6O75581 1613 aa21.9■■□□□ 1.1
RPP40-207ENST00000618533 AKAP12Q02952 1782 aa21.89■■□□□ 1.1
RPP40-207ENST00000618533 EIF4G2P78344 907 aaKnown RBP eCLIP21.89■■□□□ 1.09
RPP40-207ENST00000618533 CDCA8Q53HL2 280 aa21.89■■□□□ 1.09
RPP40-207ENST00000618533 CABP1Q9NZU7 370 aa21.89■■□□□ 1.09
RPP40-207ENST00000618533 DISP3Q9P2K9 1392 aa21.88■■□□□ 1.09
RPP40-207ENST00000618533 NINLQ9Y2I6 1382 aa21.88■■□□□ 1.09
RPP40-207ENST00000618533 ZNF692Q9BU19 519 aaPredicted RBP21.87■■□□□ 1.09
RPP40-207ENST00000618533 MARF1Q9Y4F3 1742 aaKnown RBP21.86■■□□□ 1.09
RPP40-207ENST00000618533 PHF23Q9BUL5 403 aaPredicted RBP21.86■■□□□ 1.09
RPP40-207ENST00000618533 MEX3CQ5U5Q3 659 aaKnown RBP21.85■■□□□ 1.09
RPP40-207ENST00000618533 USP6P35125 1406 aa21.85■■□□□ 1.09
RPP40-207ENST00000618533 ABCA3Q99758 1704 aa21.84■■□□□ 1.09
RPP40-207ENST00000618533 CPSF1Q10570 1443 aaKnown RBP21.84■■□□□ 1.09
RPP40-207ENST00000618533 NUTM2BA6NNL0 878 aaPredicted RBP21.84■■□□□ 1.09
RPP40-207ENST00000618533 NUTM2EB1AL46 878 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 331.3 ms