RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 DIEXFQ68CQ4 756 aaKnown RBP5.03□□□□□ -1.6
SMC5-204ENST00000618375 LIAT1Q6ZQX7 453 aa5.03□□□□□ -1.6
SMC5-204ENST00000618375 CCDC102AQ96A19 550 aa5.03□□□□□ -1.6
SMC5-204ENST00000618375 FCF1Q9Y324 198 aaKnown RBP5.03□□□□□ -1.6
SMC5-204ENST00000618375 SALL2Q9Y467 1007 aaPredicted RBP5.03□□□□□ -1.6
SMC5-204ENST00000618375 FAM187AA6NFU0 413 aa5.02□□□□□ -1.61
SMC5-204ENST00000618375 KDM4AO75164 1064 aa5.02□□□□□ -1.61
SMC5-204ENST00000618375 CD2BP2O95400 341 aaKnown RBP5.02□□□□□ -1.61
SMC5-204ENST00000618375 CD46P15529 392 aa5.01□□□□□ -1.61
SMC5-204ENST00000618375 CLCN1P35523 988 aa5.01□□□□□ -1.61
SMC5-204ENST00000618375 PLA2G2CQ5R387 149 aa5.01□□□□□ -1.61
SMC5-204ENST00000618375 LMOD2Q6P5Q4 547 aa5.01□□□□□ -1.61
SMC5-204ENST00000618375 RNF19BQ6ZMZ0 732 aa5.01□□□□□ -1.61
SMC5-204ENST00000618375 PRDM9Q9NQV7 894 aa5.01□□□□□ -1.61
SMC5-204ENST00000618375 PDIA4P13667 645 aaKnown RBP5□□□□□ -1.61
SMC5-204ENST00000618375 TTLL12Q14166 644 aaPredicted RBP5□□□□□ -1.61
SMC5-204ENST00000618375 GLIPR1L2Q4G1C9 344 aa5□□□□□ -1.61
SMC5-204ENST00000618375 ZNF787Q6DD87 383 aa5□□□□□ -1.61
SMC5-204ENST00000618375 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5□□□□□ -1.61
SMC5-204ENST00000618375 NUTM1Q86Y26 1132 aa5□□□□□ -1.61
SMC5-204ENST00000618375 EMID1Q96A84 441 aaPredicted RBP5□□□□□ -1.61
SMC5-204ENST00000618375 GPCPD1Q9NPB8 672 aa5□□□□□ -1.61
SMC5-204ENST00000618375 SUPT16HQ9Y5B9 1047 aaKnown RBP5□□□□□ -1.61
SMC5-204ENST00000618375 USP46P62068 366 aa4.99□□□□□ -1.61
SMC5-204ENST00000618375 PRR20EP86478 221 aa4.99□□□□□ -1.61
SMC5-204ENST00000618375 PRR20CP86479 221 aa4.99□□□□□ -1.61
SMC5-204ENST00000618375 PRR20DP86480 221 aa4.99□□□□□ -1.61
SMC5-204ENST00000618375 PRR20BP86481 221 aa4.99□□□□□ -1.61
SMC5-204ENST00000618375 PRR20AP86496 221 aa4.99□□□□□ -1.61
SMC5-204ENST00000618375 BRICD5Q6PL45 260 aa4.99□□□□□ -1.61
SMC5-204ENST00000618375 CCDC24Q8N4L8 307 aa4.99□□□□□ -1.61
SMC5-204ENST00000618375 FAM160A2Q8N612 972 aaPredicted RBP4.99□□□□□ -1.61
SMC5-204ENST00000618375 THAP11Q96EK4 314 aa4.99□□□□□ -1.61
SMC5-204ENST00000618375 FANCIQ9NVI1 1328 aa4.98□□□□□ -1.61
SMC5-204ENST00000618375 DGAT1O75907 488 aa4.98□□□□□ -1.61
SMC5-204ENST00000618375 DEKP35659 375 aaKnown RBP4.98□□□□□ -1.61
SMC5-204ENST00000618375 RPIAP49247 311 aa4.98□□□□□ -1.61
SMC5-204ENST00000618375 MSS51Q4VC12 460 aa4.98□□□□□ -1.61
SMC5-204ENST00000618375 TRIM67Q6ZTA4 783 aa4.98□□□□□ -1.61
SMC5-204ENST00000618375 CYP4X1Q8N118 509 aa4.98□□□□□ -1.61
SMC5-204ENST00000618375 USB1Q9BQ65 265 aaKnown RBP4.98□□□□□ -1.61
SMC5-204ENST00000618375 TTC24A2A3L6 582 aaPredicted RBP4.97□□□□□ -1.61
SMC5-204ENST00000618375 LCE2BO14633 110 aa4.97□□□□□ -1.61
SMC5-204ENST00000618375 PDE4CQ08493 712 aa4.97□□□□□ -1.61
SMC5-204ENST00000618375 HOXA2O43364 376 aa4.96□□□□□ -1.62
SMC5-204ENST00000618375 GDF9O60383 454 aa4.96□□□□□ -1.62
SMC5-204ENST00000618375 GUCA2AQ02747 115 aa4.96□□□□□ -1.62
SMC5-204ENST00000618375 HLA-CQ95604 372 aa4.96□□□□□ -1.62
SMC5-204ENST00000618375 FAM217BQ9NTX9 383 aaPredicted RBP4.96□□□□□ -1.62
SMC5-204ENST00000618375 C6orf229H3BNL8 230 aa4.95□□□□□ -1.62
SMC5-204ENST00000618375 SSTR3P32745 418 aaPredicted RBP4.95□□□□□ -1.62
SMC5-204ENST00000618375 TAF7LQ5H9L4 462 aa4.95□□□□□ -1.62
SMC5-204ENST00000618375 FGD1P98174 961 aa4.94□□□□□ -1.62
SMC5-204ENST00000618375 TRIM32Q13049 653 aa4.94□□□□□ -1.62
SMC5-204ENST00000618375 SYMPKQ92797 1274 aaKnown RBP4.94□□□□□ -1.62
SMC5-204ENST00000618375 CCDC136Q96JN2 1154 aa4.94□□□□□ -1.62
SMC5-204ENST00000618375 PKD2L1Q9P0L9 805 aa4.94□□□□□ -1.62
SMC5-204ENST00000618375 ST8SIA5O15466 376 aa4.93□□□□□ -1.62
SMC5-204ENST00000618375 DXOO77932 396 aaKnown RBP4.93□□□□□ -1.62
SMC5-204ENST00000618375 FDX1P10109 184 aa4.93□□□□□ -1.62
SMC5-204ENST00000618375 MMP16P51512 607 aa4.93□□□□□ -1.62
SMC5-204ENST00000618375 BARGINQ6ZT62 677 aa4.93□□□□□ -1.62
SMC5-204ENST00000618375 HOMEZQ8IX15 550 aa4.93□□□□□ -1.62
SMC5-204ENST00000618375 ZC3H15Q8WU90 426 aaKnown RBP4.93□□□□□ -1.62
SMC5-204ENST00000618375 AXIN1O15169 862 aa4.92□□□□□ -1.62
SMC5-204ENST00000618375 ZMYND10O75800 440 aa4.92□□□□□ -1.62
SMC5-204ENST00000618375 JUNDP17535 347 aa4.92□□□□□ -1.62
SMC5-204ENST00000618375 GIGYF2Q6Y7W6 1299 aaKnown RBP4.92□□□□□ -1.62
SMC5-204ENST00000618375 RETREG3Q86VR2 466 aa4.92□□□□□ -1.62
SMC5-204ENST00000618375 REPIN1Q9BWE0 567 aaKnown RBP4.92□□□□□ -1.62
SMC5-204ENST00000618375 AAMPQ13685 434 aa4.91□□□□□ -1.62
SMC5-204ENST00000618375 SNIP1Q8TAD8 396 aaKnown RBP4.91□□□□□ -1.62
SMC5-204ENST00000618375 NUDT12Q9BQG2 462 aa4.91□□□□□ -1.62
SMC5-204ENST00000618375 BEGAINQ9BUH8 593 aa4.91□□□□□ -1.62
SMC5-204ENST00000618375 AAASQ9NRG9 546 aa4.91□□□□□ -1.62
SMC5-204ENST00000618375 RBM19Q9Y4C8 960 aaKnown RBP4.91□□□□□ -1.62
SMC5-204ENST00000618375 C11orf95C9JLR9 678 aaPredicted RBP4.9□□□□□ -1.63
SMC5-204ENST00000618375 WNT7AO00755 349 aa4.9□□□□□ -1.63
SMC5-204ENST00000618375 MS4A1P11836 297 aa4.9□□□□□ -1.63
SMC5-204ENST00000618375 ZNF326Q5BKZ1 582 aaKnown RBP4.9□□□□□ -1.63
SMC5-204ENST00000618375 SPIRE2Q8WWL2 714 aa4.9□□□□□ -1.63
SMC5-204ENST00000618375 MRGPRX2Q96LB1 330 aa4.9□□□□□ -1.63
SMC5-204ENST00000618375 TOR4AQ9NXH8 423 aa4.9□□□□□ -1.63
SMC5-204ENST00000618375 MOXD2PA6NHM9 499 aa4.89□□□□□ -1.63
SMC5-204ENST00000618375 NDUFV2P19404 249 aa4.89□□□□□ -1.63
SMC5-204ENST00000618375 MTMR2Q13614 643 aa4.89□□□□□ -1.63
SMC5-204ENST00000618375 DIXDC1Q155Q3 683 aa4.89□□□□□ -1.63
SMC5-204ENST00000618375 AMHR2Q16671 573 aa4.89□□□□□ -1.63
SMC5-204ENST00000618375 CTC1Q2NKJ3 1217 aa4.89□□□□□ -1.63
SMC5-204ENST00000618375 RC3H1Q5TC82 1133 aaKnown RBP4.89□□□□□ -1.63
SMC5-204ENST00000618375 CCER1Q8TC90 406 aaPredicted RBP4.89□□□□□ -1.63
SMC5-204ENST00000618375 AK7Q96M32 723 aa4.89□□□□□ -1.63
SMC5-204ENST00000618375 RSPH6AQ9H0K4 717 aa4.89□□□□□ -1.63
SMC5-204ENST00000618375 POTECB2RU33 542 aa4.88□□□□□ -1.63
SMC5-204ENST00000618375 ALDH1A1P00352 501 aa4.88□□□□□ -1.63
SMC5-204ENST00000618375 CCNYL3P0C7X3 344 aa4.88□□□□□ -1.63
SMC5-204ENST00000618375 WNT7BP56706 349 aa4.88□□□□□ -1.63
SMC5-204ENST00000618375 EHBP1Q8NDI1 1231 aa4.88□□□□□ -1.63
SMC5-204ENST00000618375 PRR7Q8TB68 274 aa4.88□□□□□ -1.63
SMC5-204ENST00000618375 TSC1Q92574 1164 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms