RNA–Protein interactions for RNA: ENST00000618283.1

GPC5-203, Transcript of glypican 5, humanhuman

TSL 3

Gene GPC5, Length 610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-203ENST00000618283 AK7Q96M32 723 aa13.15□□□□□ -0.3
GPC5-203ENST00000618283 CD2BP2O95400 341 aaKnown RBP13.14□□□□□ -0.31
GPC5-203ENST00000618283 AMHR2Q16671 573 aa13.14□□□□□ -0.31
GPC5-203ENST00000618283 MDM2Q00987 491 aaPredicted RBP13.13□□□□□ -0.31
GPC5-203ENST00000618283 CLCN1P35523 988 aa13.12□□□□□ -0.31
GPC5-203ENST00000618283 MSS51Q4VC12 460 aa13.12□□□□□ -0.31
GPC5-203ENST00000618283 TRIM66O15016 1216 aa13.11□□□□□ -0.31
GPC5-203ENST00000618283 KDM4AO75164 1064 aa13.11□□□□□ -0.31
GPC5-203ENST00000618283 GPCPD1Q9NPB8 672 aa13.11□□□□□ -0.31
GPC5-203ENST00000618283 POTECB2RU33 542 aa13.1□□□□□ -0.31
GPC5-203ENST00000618283 Q3C1V9 767 aa13.1□□□□□ -0.31
GPC5-203ENST00000618283 ZNF775Q96BV0 537 aaPredicted RBP13.09□□□□□ -0.31
GPC5-203ENST00000618283 SLC24A3Q9HC58 644 aa13.09□□□□□ -0.31
GPC5-203ENST00000618283 ST8SIA5O15466 376 aa13.08□□□□□ -0.32
GPC5-203ENST00000618283 ZBTB24O43167 697 aaPredicted RBP13.06□□□□□ -0.32
GPC5-203ENST00000618283 HLA-CQ95604 372 aa13.06□□□□□ -0.32
GPC5-203ENST00000618283 REPIN1Q9BWE0 567 aaKnown RBP13.06□□□□□ -0.32
GPC5-203ENST00000618283 AAASQ9NRG9 546 aa13.06□□□□□ -0.32
GPC5-203ENST00000618283 FAM217BQ9NTX9 383 aaPredicted RBP13.06□□□□□ -0.32
GPC5-203ENST00000618283 TOR4AQ9NXH8 423 aa13.06□□□□□ -0.32
GPC5-203ENST00000618283 MMP16P51512 607 aa13.05□□□□□ -0.32
GPC5-203ENST00000618283 USB1Q9BQ65 265 aaKnown RBP13.05□□□□□ -0.32
GPC5-203ENST00000618283 CYP4X1Q8N118 509 aa13.04□□□□□ -0.32
GPC5-203ENST00000618283 USP46P62068 366 aa13.03□□□□□ -0.32
GPC5-203ENST00000618283 HOXA2O43364 376 aa13□□□□□ -0.33
GPC5-203ENST00000618283 DXOO77932 396 aaKnown RBP13□□□□□ -0.33
GPC5-203ENST00000618283 SSTR3P32745 418 aaPredicted RBP12.99□□□□□ -0.33
GPC5-203ENST00000618283 GUCA2AQ02747 115 aa12.99□□□□□ -0.33
GPC5-203ENST00000618283 PDE4DQ08499 809 aa12.99□□□□□ -0.33
GPC5-203ENST00000618283 TRIM32Q13049 653 aa12.99□□□□□ -0.33
GPC5-203ENST00000618283 TTLL12Q14166 644 aaPredicted RBP12.99□□□□□ -0.33
GPC5-203ENST00000618283 PARP9Q8IXQ6 854 aa12.99□□□□□ -0.33
GPC5-203ENST00000618283 AVPP01185 164 aa12.98□□□□□ -0.33
GPC5-203ENST00000618283 GIGYF2Q6Y7W6 1299 aaKnown RBP12.98□□□□□ -0.33
GPC5-203ENST00000618283 CRIPAKQ8N1N5 446 aa12.97□□□□□ -0.33
GPC5-203ENST00000618283 DACH1Q9UI36 760 aa12.97□□□□□ -0.33
GPC5-203ENST00000618283 TTC24A2A3L6 582 aaPredicted RBP12.96□□□□□ -0.33
GPC5-203ENST00000618283 WNT7AO00755 349 aa12.96□□□□□ -0.33
GPC5-203ENST00000618283 CCDC24Q8N4L8 307 aa12.95□□□□□ -0.34
GPC5-203ENST00000618283 SYMPKQ92797 1274 aaKnown RBP12.95□□□□□ -0.34
GPC5-203ENST00000618283 AXIN1O15169 862 aa12.93□□□□□ -0.34
GPC5-203ENST00000618283 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
GPC5-203ENST00000618283 SNIP1Q8TAD8 396 aaKnown RBP12.92□□□□□ -0.34
GPC5-203ENST00000618283 MRGPRX2Q96LB1 330 aa12.92□□□□□ -0.34
GPC5-203ENST00000618283 CTC1Q2NKJ3 1217 aa12.91□□□□□ -0.34
GPC5-203ENST00000618283 SMPD1P17405 629 aa12.9□□□□□ -0.34
GPC5-203ENST00000618283 TPRNQ4KMQ1 711 aa12.9□□□□□ -0.34
GPC5-203ENST00000618283 MS4A1P11836 297 aa12.89□□□□□ -0.35
GPC5-203ENST00000618283 JUNDP17535 347 aa12.89□□□□□ -0.35
GPC5-203ENST00000618283 SMCPP49901 116 aaPredicted RBP12.89□□□□□ -0.35
GPC5-203ENST00000618283 J3QL48 77 aa12.87□□□□□ -0.35
GPC5-203ENST00000618283 GMPR2Q9P2T1 348 aaKnown RBP12.87□□□□□ -0.35
GPC5-203ENST00000618283 FDX1P10109 184 aa12.86□□□□□ -0.35
GPC5-203ENST00000618283 SKOR1P84550 965 aa12.86□□□□□ -0.35
GPC5-203ENST00000618283 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
GPC5-203ENST00000618283 RETREG3Q86VR2 466 aa12.86□□□□□ -0.35
GPC5-203ENST00000618283 BEGAINQ9BUH8 593 aa12.86□□□□□ -0.35
GPC5-203ENST00000618283 PCDHGC3Q9UN70 934 aa12.86□□□□□ -0.35
GPC5-203ENST00000618283 SPIRE2Q8WWL2 714 aa12.85□□□□□ -0.35
GPC5-203ENST00000618283 C11orf95C9JLR9 678 aaPredicted RBP12.83□□□□□ -0.36
GPC5-203ENST00000618283 WNT7BP56706 349 aa12.83□□□□□ -0.36
GPC5-203ENST00000618283 DIXDC1Q155Q3 683 aa12.83□□□□□ -0.36
GPC5-203ENST00000618283 C6orf229H3BNL8 230 aa12.82□□□□□ -0.36
GPC5-203ENST00000618283 PTCRAQ6ISU1 281 aaPredicted RBP12.82□□□□□ -0.36
GPC5-203ENST00000618283 NUDT12Q9BQG2 462 aa12.82□□□□□ -0.36
GPC5-203ENST00000618283 NDUFV2P19404 249 aa12.8□□□□□ -0.36
GPC5-203ENST00000618283 GJA5P36382 358 aa12.8□□□□□ -0.36
GPC5-203ENST00000618283 TREML4Q6UXN2 200 aa12.8□□□□□ -0.36
GPC5-203ENST00000618283 HPS1Q92902 700 aa12.8□□□□□ -0.36
GPC5-203ENST00000618283 KDM4CQ9H3R0 1056 aa12.79□□□□□ -0.36
GPC5-203ENST00000618283 MOXD2PA6NHM9 499 aa12.78□□□□□ -0.36
GPC5-203ENST00000618283 LCE2AQ5TA79 106 aaPredicted RBP12.78□□□□□ -0.36
GPC5-203ENST00000618283 TBC1D2Q9BYX2 928 aa12.78□□□□□ -0.36
GPC5-203ENST00000618283 ATP13A2Q9NQ11 1180 aa12.78□□□□□ -0.36
GPC5-203ENST00000618283 GPBP1L1Q9HC44 474 aaPredicted RBP12.77□□□□□ -0.37
GPC5-203ENST00000618283 ALDH1A1P00352 501 aa12.74□□□□□ -0.37
GPC5-203ENST00000618283 CCNYL3P0C7X3 344 aa12.74□□□□□ -0.37
GPC5-203ENST00000618283 SIAH2O43255 324 aa12.73□□□□□ -0.37
GPC5-203ENST00000618283 SPTLC1O15269 473 aa12.72□□□□□ -0.37
GPC5-203ENST00000618283 SNRPBP14678 240 aaKnown RBP12.72□□□□□ -0.37
GPC5-203ENST00000618283 EHBP1Q8NDI1 1231 aa12.72□□□□□ -0.37
GPC5-203ENST00000618283 PRR7Q8TB68 274 aa12.72□□□□□ -0.37
GPC5-203ENST00000618283 PTPRNQ16849 979 aa12.71□□□□□ -0.37
GPC5-203ENST00000618283 RSBN1LQ6PCB5 846 aaPredicted RBP12.71□□□□□ -0.37
GPC5-203ENST00000618283 DDRGK1Q96HY6 314 aa12.71□□□□□ -0.37
GPC5-203ENST00000618283 EVA1BQ9NVM1 165 aa12.71□□□□□ -0.37
GPC5-203ENST00000618283 SH3BP2P78314 561 aa12.7□□□□□ -0.38
GPC5-203ENST00000618283 MTMR2Q13614 643 aa12.7□□□□□ -0.38
GPC5-203ENST00000618283 TUSC1Q2TAM9 212 aa12.7□□□□□ -0.38
GPC5-203ENST00000618283 MYSM1Q5VVJ2 828 aa12.7□□□□□ -0.38
GPC5-203ENST00000618283 RSPH6AQ9H0K4 717 aa12.7□□□□□ -0.38
GPC5-203ENST00000618283 WFS1O76024 890 aa12.69□□□□□ -0.38
GPC5-203ENST00000618283 PRKCSHP14314 528 aaPredicted RBP12.69□□□□□ -0.38
GPC5-203ENST00000618283 FAM117AQ9C073 453 aa12.69□□□□□ -0.38
GPC5-203ENST00000618283 BRPF1P55201 1214 aaPredicted RBP12.68□□□□□ -0.38
GPC5-203ENST00000618283 RIC3Q7Z5B4 369 aa12.68□□□□□ -0.38
GPC5-203ENST00000618283 TRIM47Q96LD4 638 aa12.68□□□□□ -0.38
GPC5-203ENST00000618283 UNC93B1Q9H1C4 597 aa12.68□□□□□ -0.38
GPC5-203ENST00000618283 SENP2Q9HC62 589 aa12.68□□□□□ -0.38
GPC5-203ENST00000618283 SPDYE5A6NIY4 337 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms