RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 ADGRL3Q9HAR2 1447 aa32.03■■■□□ 2.72
CBWD3-213ENST00000618217 ST20-MTHFSA0A0A6YYL1 179 aa32.01■■■□□ 2.72
CBWD3-213ENST00000618217 C19orf44Q9H6X5 657 aa32■■■□□ 2.71
CBWD3-213ENST00000618217 CERKQ8TCT0 537 aa31.99■■■□□ 2.71
CBWD3-213ENST00000618217 EIF4G2P78344 907 aaKnown RBP eCLIP31.98■■■□□ 2.71
CBWD3-213ENST00000618217 ADGRB2O60241 1585 aa31.98■■■□□ 2.71
CBWD3-213ENST00000618217 IQSEC2Q5JU85 1478 aa31.98■■■□□ 2.71
CBWD3-213ENST00000618217 SBNO2Q9Y2G9 1366 aa31.97■■■□□ 2.71
CBWD3-213ENST00000618217 MINK1Q8N4C8 1332 aaPredicted RBP31.97■■■□□ 2.71
CBWD3-213ENST00000618217 C14orf37Q86TY3 774 aa31.97■■■□□ 2.71
CBWD3-213ENST00000618217 TESK2Q96S53 571 aa31.96■■■□□ 2.71
CBWD3-213ENST00000618217 HSPA5P11021 654 aaKnown RBP31.95■■■□□ 2.71
CBWD3-213ENST00000618217 MSH6P52701 1360 aa31.95■■■□□ 2.7
CBWD3-213ENST00000618217 HIRIP3Q9BW71 556 aaPredicted RBP31.94■■■□□ 2.7
CBWD3-213ENST00000618217 CDC42BPGQ6DT37 1551 aa31.94■■■□□ 2.7
CBWD3-213ENST00000618217 DCCP43146 1447 aa31.93■■■□□ 2.7
CBWD3-213ENST00000618217 TULP4Q9NRJ4 1543 aa31.88■■■□□ 2.69
CBWD3-213ENST00000618217 WASLO00401 505 aaPredicted RBP31.87■■■□□ 2.69
CBWD3-213ENST00000618217 FMN2Q9NZ56 1722 aa31.87■■■□□ 2.69
CBWD3-213ENST00000618217 CADPS2Q86UW7 1296 aa31.86■■■□□ 2.69
CBWD3-213ENST00000618217 ATF3P18847 181 aa31.85■■■□□ 2.69
CBWD3-213ENST00000618217 CDK19Q9BWU1 502 aa31.83■■■□□ 2.69
CBWD3-213ENST00000618217 SLC24A1O60721 1099 aa31.82■■■□□ 2.68
CBWD3-213ENST00000618217 EVC2Q86UK5 1308 aa31.82■■■□□ 2.68
CBWD3-213ENST00000618217 MST1RQ04912 1400 aa31.81■■■□□ 2.68
CBWD3-213ENST00000618217 USP32Q8NFA0 1604 aa31.8■■■□□ 2.68
CBWD3-213ENST00000618217 RGPD8O14715 1765 aaPredicted RBP31.78■■■□□ 2.68
CBWD3-213ENST00000618217 DISP3Q9P2K9 1392 aa31.78■■■□□ 2.68
CBWD3-213ENST00000618217 SLAIN2Q9P270 581 aa31.77■■■□□ 2.68
CBWD3-213ENST00000618217 PRR36Q9H6K5 1346 aa31.76■■■□□ 2.68
CBWD3-213ENST00000618217 C1orf167Q5SNV9 1468 aa31.76■■■□□ 2.68
CBWD3-213ENST00000618217 TMF1P82094 1093 aa31.75■■■□□ 2.67
CBWD3-213ENST00000618217 ANKARQ7Z5J8 1434 aa31.75■■■□□ 2.67
CBWD3-213ENST00000618217 NUTM2FA1L443 756 aa31.75■■■□□ 2.67
CBWD3-213ENST00000618217 CABP2Q9NPB3 220 aa31.75■■■□□ 2.67
CBWD3-213ENST00000618217 ATP7BP35670 1465 aa31.74■■■□□ 2.67
CBWD3-213ENST00000618217 TOM1O60784 492 aa31.74■■■□□ 2.67
CBWD3-213ENST00000618217 SRPK2P78362 688 aaKnown RBP31.73■■■□□ 2.67
CBWD3-213ENST00000618217 PUS7Q96PZ0 661 aaKnown RBP31.73■■■□□ 2.67
CBWD3-213ENST00000618217 UBAP1LF5GYI3 381 aa31.72■■■□□ 2.67
CBWD3-213ENST00000618217 NUDT16Q96DE0 195 aaKnown RBP31.72■■■□□ 2.67
CBWD3-213ENST00000618217 C11orf95C9JLR9 678 aaPredicted RBP31.71■■■□□ 2.67
CBWD3-213ENST00000618217 TOPAZ1Q8N9V7 1692 aa31.68■■■□□ 2.66
CBWD3-213ENST00000618217 ORAI2Q96SN7 254 aa31.67■■■□□ 2.66
CBWD3-213ENST00000618217 CCDC61Q9Y6R9 512 aa31.66■■■□□ 2.66
CBWD3-213ENST00000618217 ITSN1Q15811 1721 aa31.66■■■□□ 2.66
CBWD3-213ENST00000618217 CDCA8Q53HL2 280 aa31.65■■■□□ 2.66
CBWD3-213ENST00000618217 ATAD2Q6PL18 1390 aa31.65■■■□□ 2.66
CBWD3-213ENST00000618217 BRINP3Q76B58 766 aa31.64■■■□□ 2.65
CBWD3-213ENST00000618217 ESCO1Q5FWF5 840 aa31.63■■■□□ 2.65
CBWD3-213ENST00000618217 ROBO1Q9Y6N7 1651 aa31.62■■■□□ 2.65
CBWD3-213ENST00000618217 PPIP5K1Q6PFW1 1433 aa31.59■■■□□ 2.65
CBWD3-213ENST00000618217 KIF7Q2M1P5 1343 aa31.59■■■□□ 2.65
CBWD3-213ENST00000618217 PLEKHG3A1L390 1219 aa31.59■■■□□ 2.65
CBWD3-213ENST00000618217 PHF8Q9UPP1 1060 aa31.59■■■□□ 2.65
CBWD3-213ENST00000618217 KIF1AQ12756 1690 aa31.58■■■□□ 2.65
CBWD3-213ENST00000618217 PIP4K2BP78356 416 aa31.58■■■□□ 2.65
CBWD3-213ENST00000618217 CABP1Q9NZU7 370 aa31.58■■■□□ 2.65
CBWD3-213ENST00000618217 WASHC2AQ641Q2 1341 aa31.56■■■□□ 2.64
CBWD3-213ENST00000618217 MYOM1P52179 1685 aa31.56■■■□□ 2.64
CBWD3-213ENST00000618217 PMFBP1Q8TBY8 1022 aa31.55■■■□□ 2.64
CBWD3-213ENST00000618217 SLC12A5Q9H2X9 1139 aa31.55■■■□□ 2.64
CBWD3-213ENST00000618217 CCDC7Q96M83 1385 aa31.55■■■□□ 2.64
CBWD3-213ENST00000618217 POLR3AO14802 1390 aaPredicted RBP31.53■■■□□ 2.64
CBWD3-213ENST00000618217 NINLQ9Y2I6 1382 aa31.52■■■□□ 2.64
CBWD3-213ENST00000618217 NHSL1Q5SYE7 1610 aa31.52■■■□□ 2.64
CBWD3-213ENST00000618217 ACEP12821 1306 aa31.51■■■□□ 2.63
CBWD3-213ENST00000618217 CD163L1Q9NR16 1453 aa31.5■■■□□ 2.63
CBWD3-213ENST00000618217 FOXO3O43524 673 aa31.5■■■□□ 2.63
CBWD3-213ENST00000618217 TMC1Q8TDI8 760 aa31.5■■■□□ 2.63
CBWD3-213ENST00000618217 SCAF1Q9H7N4 1312 aaKnown RBP31.5■■■□□ 2.63
CBWD3-213ENST00000618217 POLR3GLQ9BT43 218 aa31.49■■■□□ 2.63
CBWD3-213ENST00000618217 CPSF1Q10570 1443 aaKnown RBP31.48■■■□□ 2.63
CBWD3-213ENST00000618217 DDX17Q92841 729 aaKnown RBP31.48■■■□□ 2.63
CBWD3-213ENST00000618217 AKAP12Q02952 1782 aa31.48■■■□□ 2.63
CBWD3-213ENST00000618217 AHDC1Q5TGY3 1603 aaPredicted RBP31.48■■■□□ 2.63
CBWD3-213ENST00000618217 NGDNQ8NEJ9 315 aaKnown RBP31.46■■■□□ 2.63
CBWD3-213ENST00000618217 FBXO41Q8TF61 875 aa31.46■■■□□ 2.63
CBWD3-213ENST00000618217 NPHP3Q7Z494 1330 aa31.45■■■□□ 2.63
CBWD3-213ENST00000618217 PXDNQ92626 1479 aa31.44■■■□□ 2.62
CBWD3-213ENST00000618217 ZNF316A6NFI3 1004 aaPredicted RBP31.42■■■□□ 2.62
CBWD3-213ENST00000618217 SOS2Q07890 1332 aaPredicted RBP31.42■■■□□ 2.62
CBWD3-213ENST00000618217 MON2Q7Z3U7 1717 aa31.41■■■□□ 2.62
CBWD3-213ENST00000618217 A0A1W2PP64 1363 aa31.41■■■□□ 2.62
CBWD3-213ENST00000618217 ANKRD36BQ8N2N9 1353 aa31.41■■■□□ 2.62
CBWD3-213ENST00000618217 PSME1Q06323 249 aa31.41■■■□□ 2.62
CBWD3-213ENST00000618217 ZNF692Q9BU19 519 aaPredicted RBP31.41■■■□□ 2.62
CBWD3-213ENST00000618217 TERF2IPQ9NYB0 399 aa31.41■■■□□ 2.62
CBWD3-213ENST00000618217 PHLPP1O60346 1717 aa31.4■■■□□ 2.62
CBWD3-213ENST00000618217 XPCQ01831 940 aaPredicted RBP31.39■■■□□ 2.62
CBWD3-213ENST00000618217 KRT28Q7Z3Y7 464 aa31.39■■■□□ 2.62
CBWD3-213ENST00000618217 TRPM3Q9HCF6 1732 aaPredicted RBP31.39■■■□□ 2.62
CBWD3-213ENST00000618217 USP6P35125 1406 aa31.39■■■□□ 2.62
CBWD3-213ENST00000618217 SSH2Q76I76 1423 aa31.38■■■□□ 2.61
CBWD3-213ENST00000618217 COL16A1Q07092 1604 aaPredicted RBP31.38■■■□□ 2.61
CBWD3-213ENST00000618217 HDGFL2Q7Z4V5 671 aaPredicted RBP31.37■■■□□ 2.61
CBWD3-213ENST00000618217 KTN1Q86UP2 1357 aaKnown RBP31.36■■■□□ 2.61
CBWD3-213ENST00000618217 NRKQ7Z2Y5 1582 aa31.35■■■□□ 2.61
CBWD3-213ENST00000618217 CARD14Q9BXL6 1004 aa31.35■■■□□ 2.61
CBWD3-213ENST00000618217 PANK3Q9H999 370 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms